Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d045603_circ_g.2 |
ID in PlantcircBase | zma_circ_002923 |
Alias | circ1377 |
Organism | Zea mays |
Position | chr9: 28455928-28456318 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | CIRI |
Parent gene | Zm00001d045603 |
Parent gene annotation |
polymerase II transcription-mediator3 |
Parent gene strand | + |
Alternative splicing | Zm00001d045603_circ_ag.1 Zm00001d045605_circ_igg.1 |
Support reads | 4 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d045603_T033:1 Zm00001d045603_T068:1 Zm00001d045603_T051:1 Zm00001d045603_T016:1 Zm00001d045603_T024:1 Zm00001d045603_T036:1 Zm00001d045603_T007:1 Zm00001d045603_T003:1 Zm00001d045603_T053:1 Zm00001d045603_T005:1 Zm00001d045603_T018:1 Zm00001d045603_T020:1 Zm00001d045603_T010:1 Zm00001d045603_T028:1 Zm00001d045603_T011:1 Zm00001d045603_T059:1 Zm00001d045603_T023:1 Zm00001d045603_T069:1 Zm00001d045603_T064:1 Zm00001d045603_T049:1 Zm00001d045603_T066:1 Zm00001d045603_T029:1 Zm00001d045603_T034:1 Zm00001d045603_T009:1 Zm00001d045603_T047:1 Zm00001d045603_T062:1 Zm00001d045603_T021:1 Zm00001d045603_T054:1 Zm00001d045603_T056:1 Zm00001d045603_T061:1 Zm00001d045603_T035:1 Zm00001d045603_T015:1 Zm00001d045603_T043:1 Zm00001d045603_T001:1 Zm00001d045603_T027:1 Zm00001d045603_T026:1 Zm00001d045603_T041:1 Zm00001d045603_T012:1 Zm00001d045603_T058:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.199922656 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |