Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d046971_circ_g.1 |
ID in PlantcircBase | zma_circ_000482 |
Alias | NA |
Organism | Zea mays |
Position | chr9: 113594273-113594397 JBrowse» |
Reference genome | AGPv4.38 |
Type | i-circRNA |
Identification method | SMALT, Segemehl |
Parent gene | Zm00001d046971 |
Parent gene annotation |
Filamentation temperature-sensitive H 2A isoform 1; Filamentatio n temperature-sensitive H 2A isoform 2; Filamentation temperatur e-sensitive H 2A isoform 3 |
Parent gene strand | - |
Alternative splicing | Zm00001d046971_circ_igg.1 Zm00001d046971_circ_igg.2 |
Support reads | 3 |
Tissues | shoot |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | 0 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.346666667 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015 |