Plant Circular RNA Database

Detail information of Csa3G169500_circ_g.1

			
						 General Information
					
						CircRNA Name
						Csa3G169500_circ_g.1
					
						ID in PlantcircBase
						csa_circ_001620
					
						Alias
						Chr3:11268762_11272887
					
						Organism
						
							Cucumis sativus						
					
						Position
						
							chrChr3: 11268762-11272887  JBrowse»						
					
						Reference genome
						
							Cucumis sativus v1.5						
					
						Type  
						
							e-circRNA							
									
						Identification method
						Find_circ
					
						Parent gene
						
							Csa3G169500						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							Chr3_circ_ig.38 						
					
						Support reads
						NA
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Csa3G169500.1:5

General Information
CircRNA Name	Csa3G169500_circ_g.1
ID in PlantcircBase	csa_circ_001620
Alias	Chr3:11268762_11272887
Organism	Cucumis sativus
Position	chrChr3: 11268762-11272887 JBrowse»
Reference genome	Cucumis sativus v1.5
Type	e-circRNA
Identification method	Find_circ
Parent gene	Csa3G169500
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	Chr3_circ_ig.38
Support reads	NA
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Csa3G169500.1:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GCAAAAGGCAAATGCATTGGCCGCTAGCTTTATATACATGCCAGTTGGGGAAAATATTGACTGG
AGACTATCTGCGACTATTTCTCCATGCTATGTGACGgctcaataccacgattggataaagcttt
tagaagttgtttcaaggtataagacatatgttgaagtttcccatttgagaccgatggttcctgt
tttggttg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 876
Transcript exons: 11268762-11268919,11269097-11269255,11270967-11271059,11
271203-11271554,11272774-11272887
GCTCAATACCACGATTGGATAAAGCTTTTAGAAGTTGTTTCAAGGTATAAGACATATGTTGAAG
TTTCCCATTTGAGACCGATGGTTCCTGTTTTGGTTGCTCCTAATCTGTGGTGGCGTTATGCTGT
TCAAGCATGCCTGCAGCAGAAGAAAATGTGTTATCGGTTTTCTTGGGAGCGAATACGGCAACTT
TGTCAACTTCGTAGACGCTATATTCAGCTATATGCTGGTTCATTGCAACGAATGTCAAATACTA
GTAACAACGAGATTAGAGAAATTGAGAAGGATCTCGATTCCAAAGTGATTCTTTTATGGAGGTT
ACTTGCTCATGCGAAGATTGAATCTGTGAAATCAAAAGAAGCAGCTGAACAGAAACGATTGAAA
AAGAGTAGCTGGTTTTCATTTCGATGGCGTGCGAACTCTGAAGACACTTCTGATGGGGATGCTT
CGGAGGGATCATATCTAGGTGTAGAACAATTGACTAAAGAGGAATGGCAGGCAATTAATAAATT
GCTGAGTTACCAACAAGATGAGGACACACCATCACATTCTGGGAAGGATGGGCAGAACATGGTA
CAGTCTTTGTTTACAGTATCGATTAATCAGGCTGCTGCAAGAATCGTTAACATTAATCAGACTG
AGATTGTTTGCGGAAGATTTGAGCAACTTTCTGTGTCAACCAAGTTAAAACAGCGCAGCACCTA
CTGTGATGTGTTGCTGAAATTTTATGGTTTATCTGCTCCAGAAGGTTCACTTGCTCAGAGTGTT
TCTAGCGAGCAAAAGGCAAATGCATTGGCCGCTAGCTTTATATACATGCCAGTTGGGGAAAATA
TTGACTGGAGACTATCTGCGACTATTTCTCCATGCTATGTGACG
						
					

						Genomic sequence
						
							GCTCAATACCACGATTGGATAAAGCTTTTAGAAGTTGTTTCAAGGTATAAGACATATGTTGAAG
TTTCCCATTTGAGACCGATGGTTCCTGTTTTGGTTGCTCCTAATCTGTGGTGGCGTTATGCTGT
TCAAGCATGCCTGCAGCAGAAGAAAATGTGGTAATTTATAATACAGTTTGCAATCAATTCTCTT
CATTTGATATGAAGAAATTATATTTGTACCTGCAATTTCCCCACGTCAAAGTGATAAAATATTT
GTACCTGCAATCTTTATATTCTTGTTAAGTTTAATTCCTAATATTGATACTCACACTTTGTCTA
TTGCTTCTGAATAAGTTATCGGTTTTCTTGGGAGCGAATACGGCAACTTTGTCAACTTCGTAGA
CGCTATATTCAGCTATATGCTGGTTCATTGCAACGAATGTCAAATACTAGTAACAACGAGATTA
GAGAAATTGAGAAGGATCTCGATTCCAAAGTGATTCTTTTATGGAGGTACATAAATTATCTTCT
CTAGTTATTTATGTGTCAGACTGGTATGAGTGTGTTTGAGTTGATCTCATTGCTAGATGTTTGT
TGGTTTGAAAATAAACAGAGCTTTTCATCGAAAAAATGAAAAAAGCTAAAGCTTGAAGATACAA
TTATCCTCAAAGAGGAAAGAAACAAAGTAAAACTAAGGTAGAACATAGAAATGTAGCTTAACCC
CATTTCTTTCCCACCACTCCTATTGATAAGAAGGAAATTCTTCAGCATCTGATTTCAATAGTTG
AAGATTGTAATATTCATTTGGTGGAACAGTGGTTTCAAAGACATGTGGTGACAAAGGATGGATC
TTTGAATTCTGTGAATCATGTTAGGGTTTGGTGATCTTCTTCTGGGTTGGCGCTTCTGTAACTT
TGTTGGTTTTGAATCCGACCTTGGTCATAACTCATGGACCAATTAGAGCTACATTTGTTTTTGT
CAAAATTAAAGAGCTTTAGAGTTCTTCCTTCAGTGTTCTCCATTTGTTTCAGCTGGTGTTTTTT
GGTTGTATAAGTCTGACAGGCTTGGTTTTGGGAGGGCTTCTTTCTTTGGCAGCTTGCAAACCAG
TCCTATTATGAGCTCTTTTGCAAGCCTCATTCGCATTCAGAACTCCTTGTTGCTCAAGCTTCTA
ATTTTGTTCTTTGTCAGAAATCTCATTTGGAAAATTTTTGGCTCAATGAATTTTGTTCTTGTTG
TGCCGATCTTTTCGATGTTTGTTCATTTTTCCCTTGGTTCTTTGTACTTGGACTCATTTCATTG
CTTCAATGAAAAGTCTTATTTCCATTAAAAAAAAAGTGTAACAAAAAAAAAAAACAGTGTAACC
CCATTCATTTTGGGAGCCTCATTTTCTTCTCATGGTGGCATTACTAGAGTTTATTGGCTTGTTG
CAGTGCATTTCTTATTTTTTCTTTTTTAATTTTCTTCCTGATTTTTGGTTGGCTGGGATTTATC
GGACCTTTCAAAATTCTCTGCTTCCCATGATTTGTTCGTTTTGGTTATGCTTGTCTTTAAGATC
TTTTCATTGTAATTTAGTATCATTCTATTTTTTTGGTTTATTTTTCTGTTAAAAGGTATTTATA
TTTTTAAGCATAGTCTATTTTATTTTATCAATAGAAAGTTTCATTTCCTTTTTCTAAACTTGAA
ATTGACGGAACTTCTTTGATTAGTTTGACTTTTTCGTTTCCTTTTTTTAAGAAAAGAAAAAAGA
AAAAGAAAAAGAAAAAGAGATCACAATAAATTATTGTACAAGTTATTTAAACTAGCCTATAATA
TGGGAATATCAAAATGGATTGTTCTTGCACAATCTCGTGGCATCAAGCATCCAAGTTGGTACCT
TTTTTTCTATTCAACTGGGAGGGATCTTGGCTATGTTAAATAACTTAATTCTTAAAATATTTTC
CTTTTCTTTTTGAAACAGAAACTGAGATTTTTATTAAGAGAATGAAAAGAGTAGTATGAGAATA
ACAAAGCATCAAAACAATCGTAATCAAGTAAATCAACACAGGAACCAAAATATGAGGCACTTCG
AGAAGAACAATCTCTTTAAAAAAACAGAAAAGCTTCTTCCAACTCCCGTTTAAATCTTGGATAG
AAAAACTCTGGAAGCTCTTAGATAATTTGTAACCAGTAATATAAGTTGTGGCTGAAACTTAATT
TGATATCATTGCAACTTATTGTTGTTTAGGTTACTTGCTCATGCGAAGATTGAATCTGTGAAAT
CAAAAGAAGCAGCTGAACAGAAACGATTGAAAAAGAGTAGCTGGTTTTCATTTCGATGGTTTGT
GAAAATCTTACTCCCAGTATTTGATTCAGATCAACTTTCCCAAGGCTACAATTCACCTTTTTTT
TTTCCCTTCTCTTTTGAGAAAACAATTCTTCTTTTAATCTTGGCAATTTATAGTGGTTTTCACG
TCATATTAGGCGTGCGAACTCTGAAGACACTTCTGATGGGGATGCTTCGGAGGGATCATATCTA
GGTGTAGAACAATTGACTAAAGAGGAATGGCAGGCAATTAATAAATTGCTGAGTTACCAACAAG
ATGAGGACACACCATCACATTCTGGGAAGGATGGGCAGAACATGGTACAGTCTTTGTTTACAGT
ATCGATTAATCAGGCTGCTGCAAGAATCGTTAACATTAATCAGACTGAGATTGTTTGCGGAAGA
TTTGAGCAACTTTCTGTGTCAACCAAGTTAAAACAGCGCAGCACCTACTGTGATGTGTTGCTGA
AATTTTATGGTTTATCTGCTCCAGAAGGTTCACTTGCTCAGGTTTGTTCGCATCTTGATTGGTT
TGAGTTGATATAATGTTGCTGATGGATATTTTCCTTTCAATTTCAACTTTTACATTTAAATTAA
TTTTTTAAATAAGAAATAACACTTTCGTTTATGATTGAAATGCTATGACAGAGTGCAATAAAGT
ATCCATGAGAGGTAATTGCAAAATATACAGAGGGAAATCTATAGTTCGACCCTAGAAAAATGAT
TCAAAGCCTACAATGGAGAACTTTTCTTATGTCTGTTGGTTGGTTAGAGTGGTTTGAATCTTTG
GGATCGGTTGCTTAACTTTGGGTTAGAGAACATGATATTTATTTTGGATAGCATTGGAGTTGTA
GATTTGTGGTATTGCAACAGTTGCTTCTTGTCCAATCAAGTTCAGAGCTGGTGGTTCTTTTTTC
AAGTTGTCTGGAAATTTTTTAAACTATCCCCTCTGTTTTTTAGTAAATTATTTTTTCTGAAAGG
TCTTTGGAAGTTATTTTGTCCCAAAAGGTTATCTCTCCATACCTTGGGCCATTATTCCATTATT
TTGCTTGTTTGGGTTTTTTGGCGTTCCTTTGGCTCGTTCACTTTGAAAATTCAAGATTTTTTGT
TTCCTATTGGTGTTTTCATTTCTAAGATTTTAACTGCGTTCTCTCCAAATTTCATGCTTAATTG
GTTGGCTTTTATTTAGTCTGCCTATTATTCGTTCACATGACTCTTTGTTTGTTCTTTTTAAGTT
TTTTGCCTCTTCACTTTGTTTCCTTGTTTTTTAGCAATAATCTCTTTCCATTTTATCAATGAAA
GTTTTGTTTCCTTTAAAAAACTTTCTTAAAAATTTGGATATGAATTCAGTAACAATTTTTGTTA
ATTACCTATTATTGAAAAAAAGGGAGTCATGGTTTAAAATTATTCCTAACGTTGACACTTTTGT
ATTTATTAACTTATTTAAATTCCTATAATAGAAATTAACATGTCCTTGACACCAAAATATTGTA
GAGTCAGACGAGTTTTCCGTGAGATTAGTCGAAGTGCATGTACACTCACGGATATAAAAAAGAA
AATTAACAAGTAGTTTTCATTAGTATTGGGTCTTGAATCTTATATACTCCTTGGTGGAAAGTCT
CCTTGTGATTTAAAGTTTCTGTAGCATGTAATGTTGAATTATTTTCTGTCATTCATCTTATTGT
TACAATATCAAAGATGTTTGTTTCTGGTCAAAATTATTTAACAGAGTGTTTCTAGCGAGCAAAA
GGCAAATGCATTGGCCGCTAGCTTTATATACATGCCAGTTGGGGAAAATATTGACTGGAGACTA
TCTGCGACTATTTCTCCATGCTATGTGACG
						
					

			
		

Sequences
Splice junction sequence	GCAAAAGGCAAATGCATTGGCCGCTAGCTTTATATACATGCCAGTTGGGGAAAATATTGACTGG AGACTATCTGCGACTATTTCTCCATGCTATGTGACGgctcaataccacgattggataaagcttt tagaagttgtttcaaggtataagacatatgttgaagtttcccatttgagaccgatggttcctgt tttggttg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 876 Transcript exons: 11268762-11268919,11269097-11269255,11270967-11271059,11 271203-11271554,11272774-11272887 GCTCAATACCACGATTGGATAAAGCTTTTAGAAGTTGTTTCAAGGTATAAGACATATGTTGAAG TTTCCCATTTGAGACCGATGGTTCCTGTTTTGGTTGCTCCTAATCTGTGGTGGCGTTATGCTGT TCAAGCATGCCTGCAGCAGAAGAAAATGTGTTATCGGTTTTCTTGGGAGCGAATACGGCAACTT TGTCAACTTCGTAGACGCTATATTCAGCTATATGCTGGTTCATTGCAACGAATGTCAAATACTA GTAACAACGAGATTAGAGAAATTGAGAAGGATCTCGATTCCAAAGTGATTCTTTTATGGAGGTT ACTTGCTCATGCGAAGATTGAATCTGTGAAATCAAAAGAAGCAGCTGAACAGAAACGATTGAAA AAGAGTAGCTGGTTTTCATTTCGATGGCGTGCGAACTCTGAAGACACTTCTGATGGGGATGCTT CGGAGGGATCATATCTAGGTGTAGAACAATTGACTAAAGAGGAATGGCAGGCAATTAATAAATT GCTGAGTTACCAACAAGATGAGGACACACCATCACATTCTGGGAAGGATGGGCAGAACATGGTA CAGTCTTTGTTTACAGTATCGATTAATCAGGCTGCTGCAAGAATCGTTAACATTAATCAGACTG AGATTGTTTGCGGAAGATTTGAGCAACTTTCTGTGTCAACCAAGTTAAAACAGCGCAGCACCTA CTGTGATGTGTTGCTGAAATTTTATGGTTTATCTGCTCCAGAAGGTTCACTTGCTCAGAGTGTT TCTAGCGAGCAAAAGGCAAATGCATTGGCCGCTAGCTTTATATACATGCCAGTTGGGGAAAATA TTGACTGGAGACTATCTGCGACTATTTCTCCATGCTATGTGACG
Genomic sequence	GCTCAATACCACGATTGGATAAAGCTTTTAGAAGTTGTTTCAAGGTATAAGACATATGTTGAAG TTTCCCATTTGAGACCGATGGTTCCTGTTTTGGTTGCTCCTAATCTGTGGTGGCGTTATGCTGT TCAAGCATGCCTGCAGCAGAAGAAAATGTGGTAATTTATAATACAGTTTGCAATCAATTCTCTT CATTTGATATGAAGAAATTATATTTGTACCTGCAATTTCCCCACGTCAAAGTGATAAAATATTT GTACCTGCAATCTTTATATTCTTGTTAAGTTTAATTCCTAATATTGATACTCACACTTTGTCTA TTGCTTCTGAATAAGTTATCGGTTTTCTTGGGAGCGAATACGGCAACTTTGTCAACTTCGTAGA CGCTATATTCAGCTATATGCTGGTTCATTGCAACGAATGTCAAATACTAGTAACAACGAGATTA GAGAAATTGAGAAGGATCTCGATTCCAAAGTGATTCTTTTATGGAGGTACATAAATTATCTTCT CTAGTTATTTATGTGTCAGACTGGTATGAGTGTGTTTGAGTTGATCTCATTGCTAGATGTTTGT TGGTTTGAAAATAAACAGAGCTTTTCATCGAAAAAATGAAAAAAGCTAAAGCTTGAAGATACAA TTATCCTCAAAGAGGAAAGAAACAAAGTAAAACTAAGGTAGAACATAGAAATGTAGCTTAACCC CATTTCTTTCCCACCACTCCTATTGATAAGAAGGAAATTCTTCAGCATCTGATTTCAATAGTTG AAGATTGTAATATTCATTTGGTGGAACAGTGGTTTCAAAGACATGTGGTGACAAAGGATGGATC TTTGAATTCTGTGAATCATGTTAGGGTTTGGTGATCTTCTTCTGGGTTGGCGCTTCTGTAACTT TGTTGGTTTTGAATCCGACCTTGGTCATAACTCATGGACCAATTAGAGCTACATTTGTTTTTGT CAAAATTAAAGAGCTTTAGAGTTCTTCCTTCAGTGTTCTCCATTTGTTTCAGCTGGTGTTTTTT GGTTGTATAAGTCTGACAGGCTTGGTTTTGGGAGGGCTTCTTTCTTTGGCAGCTTGCAAACCAG TCCTATTATGAGCTCTTTTGCAAGCCTCATTCGCATTCAGAACTCCTTGTTGCTCAAGCTTCTA ATTTTGTTCTTTGTCAGAAATCTCATTTGGAAAATTTTTGGCTCAATGAATTTTGTTCTTGTTG TGCCGATCTTTTCGATGTTTGTTCATTTTTCCCTTGGTTCTTTGTACTTGGACTCATTTCATTG CTTCAATGAAAAGTCTTATTTCCATTAAAAAAAAAGTGTAACAAAAAAAAAAAACAGTGTAACC CCATTCATTTTGGGAGCCTCATTTTCTTCTCATGGTGGCATTACTAGAGTTTATTGGCTTGTTG CAGTGCATTTCTTATTTTTTCTTTTTTAATTTTCTTCCTGATTTTTGGTTGGCTGGGATTTATC GGACCTTTCAAAATTCTCTGCTTCCCATGATTTGTTCGTTTTGGTTATGCTTGTCTTTAAGATC TTTTCATTGTAATTTAGTATCATTCTATTTTTTTGGTTTATTTTTCTGTTAAAAGGTATTTATA TTTTTAAGCATAGTCTATTTTATTTTATCAATAGAAAGTTTCATTTCCTTTTTCTAAACTTGAA ATTGACGGAACTTCTTTGATTAGTTTGACTTTTTCGTTTCCTTTTTTTAAGAAAAGAAAAAAGA AAAAGAAAAAGAAAAAGAGATCACAATAAATTATTGTACAAGTTATTTAAACTAGCCTATAATA TGGGAATATCAAAATGGATTGTTCTTGCACAATCTCGTGGCATCAAGCATCCAAGTTGGTACCT TTTTTTCTATTCAACTGGGAGGGATCTTGGCTATGTTAAATAACTTAATTCTTAAAATATTTTC CTTTTCTTTTTGAAACAGAAACTGAGATTTTTATTAAGAGAATGAAAAGAGTAGTATGAGAATA ACAAAGCATCAAAACAATCGTAATCAAGTAAATCAACACAGGAACCAAAATATGAGGCACTTCG AGAAGAACAATCTCTTTAAAAAAACAGAAAAGCTTCTTCCAACTCCCGTTTAAATCTTGGATAG AAAAACTCTGGAAGCTCTTAGATAATTTGTAACCAGTAATATAAGTTGTGGCTGAAACTTAATT TGATATCATTGCAACTTATTGTTGTTTAGGTTACTTGCTCATGCGAAGATTGAATCTGTGAAAT CAAAAGAAGCAGCTGAACAGAAACGATTGAAAAAGAGTAGCTGGTTTTCATTTCGATGGTTTGT GAAAATCTTACTCCCAGTATTTGATTCAGATCAACTTTCCCAAGGCTACAATTCACCTTTTTTT TTTCCCTTCTCTTTTGAGAAAACAATTCTTCTTTTAATCTTGGCAATTTATAGTGGTTTTCACG TCATATTAGGCGTGCGAACTCTGAAGACACTTCTGATGGGGATGCTTCGGAGGGATCATATCTA GGTGTAGAACAATTGACTAAAGAGGAATGGCAGGCAATTAATAAATTGCTGAGTTACCAACAAG ATGAGGACACACCATCACATTCTGGGAAGGATGGGCAGAACATGGTACAGTCTTTGTTTACAGT ATCGATTAATCAGGCTGCTGCAAGAATCGTTAACATTAATCAGACTGAGATTGTTTGCGGAAGA TTTGAGCAACTTTCTGTGTCAACCAAGTTAAAACAGCGCAGCACCTACTGTGATGTGTTGCTGA AATTTTATGGTTTATCTGCTCCAGAAGGTTCACTTGCTCAGGTTTGTTCGCATCTTGATTGGTT TGAGTTGATATAATGTTGCTGATGGATATTTTCCTTTCAATTTCAACTTTTACATTTAAATTAA TTTTTTAAATAAGAAATAACACTTTCGTTTATGATTGAAATGCTATGACAGAGTGCAATAAAGT ATCCATGAGAGGTAATTGCAAAATATACAGAGGGAAATCTATAGTTCGACCCTAGAAAAATGAT TCAAAGCCTACAATGGAGAACTTTTCTTATGTCTGTTGGTTGGTTAGAGTGGTTTGAATCTTTG GGATCGGTTGCTTAACTTTGGGTTAGAGAACATGATATTTATTTTGGATAGCATTGGAGTTGTA GATTTGTGGTATTGCAACAGTTGCTTCTTGTCCAATCAAGTTCAGAGCTGGTGGTTCTTTTTTC AAGTTGTCTGGAAATTTTTTAAACTATCCCCTCTGTTTTTTAGTAAATTATTTTTTCTGAAAGG TCTTTGGAAGTTATTTTGTCCCAAAAGGTTATCTCTCCATACCTTGGGCCATTATTCCATTATT TTGCTTGTTTGGGTTTTTTGGCGTTCCTTTGGCTCGTTCACTTTGAAAATTCAAGATTTTTTGT TTCCTATTGGTGTTTTCATTTCTAAGATTTTAACTGCGTTCTCTCCAAATTTCATGCTTAATTG GTTGGCTTTTATTTAGTCTGCCTATTATTCGTTCACATGACTCTTTGTTTGTTCTTTTTAAGTT TTTTGCCTCTTCACTTTGTTTCCTTGTTTTTTAGCAATAATCTCTTTCCATTTTATCAATGAAA GTTTTGTTTCCTTTAAAAAACTTTCTTAAAAATTTGGATATGAATTCAGTAACAATTTTTGTTA ATTACCTATTATTGAAAAAAAGGGAGTCATGGTTTAAAATTATTCCTAACGTTGACACTTTTGT ATTTATTAACTTATTTAAATTCCTATAATAGAAATTAACATGTCCTTGACACCAAAATATTGTA GAGTCAGACGAGTTTTCCGTGAGATTAGTCGAAGTGCATGTACACTCACGGATATAAAAAAGAA AATTAACAAGTAGTTTTCATTAGTATTGGGTCTTGAATCTTATATACTCCTTGGTGGAAAGTCT CCTTGTGATTTAAAGTTTCTGTAGCATGTAATGTTGAATTATTTTCTGTCATTCATCTTATTGT TACAATATCAAAGATGTTTGTTTCTGGTCAAAATTATTTAACAGAGTGTTTCTAGCGAGCAAAA GGCAAATGCATTGGCCGCTAGCTTTATATACATGCCAGTTGGGGAAAATATTGACTGGAGACTA TCTGCGACTATTTCTCCATGCTATGTGACG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.472617038

Conservation Information
Conserved circRNAs	NA
PMCS	0.472617038

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							11268844-11272884(+)
11272876-11268808(+)
						
						Potential amino acid sequence
						
							MVPVLVAPNLWWRYAVQACLQQKKMCYRFSWERIRQLCQLRRRYIQLYAGSLQRMSNTSNNEIR
EIEKDLDSKVILLWRLLAHAKIESVKSKEAAEQKRLKKSSWFSFRWRANSEDTSDGDASEGSYL
GVEQLTKEEWQAINKLLSYQQDEDTPSHSGKDGQNMVQSLFTVSINQAAARIVNINQTEIVCGR
FEQLSVSTKLKQRSTYCDVLLKFYGLSAPEGSLAQSVSSEQKANALAASFIYMPVGENIDWRLS
ATISPCYVTAQYHDWIKLLEVVSRYKTYVEVSHLRPMVPVLVAPNLWWRYAVQACLQQKKMCYR
FSWERIRQLCQLRRRYIQLYAGSLQRMSNTSNNEIREIEKDLDSKVILLWRLLAHAKIESVKSK
EAAEQKRLKKSSWFSFRWRANSEDTSDGDASEGSYLGVEQLTKEEWQAINKLLSYQQDEDTPSH
SGKDGQNMVQSLFTVSINQAAARIVNINQTEIVCGRFEQLSVSTKLKQRSTYCDVLLKFYGLSA
PEGSLAQSVSSEQKANALAASFIYMPVGENIDWRLSATISPCYVTAQYHDWIKLLEVVSRYKTY
VEVSHLRPMVPVLVAPNLWWRYAVQACLQQKKMCYRFSWERIRQLCQLRRRYIQLYAGSLQRMS
NTSNNEIREIEKDLDSKVILLWRLLAHAKIESVKSKEAAEQKRLKKSSWFSFRWRANSEDTSDG
DASEGSYLGVEQLTKEEWQAINKLLSYQQDEDTPSHSGKDGQNMVQSLFTVSINQAAARIVNIN
QTEIVCGRFEQLSVSTKLKQRSTYCDVLLKFYGLSAPEGSLAQSVSSEQKANALAASFIYMPVG
ENIDWRLSATISPCYVTAQYHDWIKLLEVVSRYKTYVEVSHLRPMVPVLVAPNLWWRYAVQACL
QQKKMCYRFSWERIRQLCQLRRRYIQLYAGSLQRMSNTSNNEIREIEKDLDSKVILLWRLLAHA
KIESVKSKEAAEQKRLKKSSWFSFRWRANSEDTSDGDASEGSYLGVEQLTKEEWQAINKLLSYQ
QDEDTPSHSGKDGQNMVQSLFTVSINQAAARIVNINQTEIVCGRFEQLSVSTKLKQRSTYCDVL
LKFYGLSAPEGSLAQSVSSEQKANALAASFIYMPVGENIDWRLSATISPCYVT
MLCDGSIPRLDKAFRSCFKV*
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	11268844-11272884(+) 11272876-11268808(+)
Potential amino acid sequence	MVPVLVAPNLWWRYAVQACLQQKKMCYRFSWERIRQLCQLRRRYIQLYAGSLQRMSNTSNNEIR EIEKDLDSKVILLWRLLAHAKIESVKSKEAAEQKRLKKSSWFSFRWRANSEDTSDGDASEGSYL GVEQLTKEEWQAINKLLSYQQDEDTPSHSGKDGQNMVQSLFTVSINQAAARIVNINQTEIVCGR FEQLSVSTKLKQRSTYCDVLLKFYGLSAPEGSLAQSVSSEQKANALAASFIYMPVGENIDWRLS ATISPCYVTAQYHDWIKLLEVVSRYKTYVEVSHLRPMVPVLVAPNLWWRYAVQACLQQKKMCYR FSWERIRQLCQLRRRYIQLYAGSLQRMSNTSNNEIREIEKDLDSKVILLWRLLAHAKIESVKSK EAAEQKRLKKSSWFSFRWRANSEDTSDGDASEGSYLGVEQLTKEEWQAINKLLSYQQDEDTPSH SGKDGQNMVQSLFTVSINQAAARIVNINQTEIVCGRFEQLSVSTKLKQRSTYCDVLLKFYGLSA PEGSLAQSVSSEQKANALAASFIYMPVGENIDWRLSATISPCYVTAQYHDWIKLLEVVSRYKTY VEVSHLRPMVPVLVAPNLWWRYAVQACLQQKKMCYRFSWERIRQLCQLRRRYIQLYAGSLQRMS NTSNNEIREIEKDLDSKVILLWRLLAHAKIESVKSKEAAEQKRLKKSSWFSFRWRANSEDTSDG DASEGSYLGVEQLTKEEWQAINKLLSYQQDEDTPSHSGKDGQNMVQSLFTVSINQAAARIVNIN QTEIVCGRFEQLSVSTKLKQRSTYCDVLLKFYGLSAPEGSLAQSVSSEQKANALAASFIYMPVG ENIDWRLSATISPCYVTAQYHDWIKLLEVVSRYKTYVEVSHLRPMVPVLVAPNLWWRYAVQACL QQKKMCYRFSWERIRQLCQLRRRYIQLYAGSLQRMSNTSNNEIREIEKDLDSKVILLWRLLAHA KIESVKSKEAAEQKRLKKSSWFSFRWRANSEDTSDGDASEGSYLGVEQLTKEEWQAINKLLSYQ QDEDTPSHSGKDGQNMVQSLFTVSINQAAARIVNINQTEIVCGRFEQLSVSTKLKQRSTYCDVL LKFYGLSAPEGSLAQSVSSEQKANALAASFIYMPVGENIDWRLSATISPCYVT MLCDGSIPRLDKAFRSCFKV*
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						He et al., 2020

circRNA

Detail information of Csa3G169500_circ_g.1

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