Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d035512_circ_g.2 |
ID in PlantcircBase | zma_circ_008907 |
Alias | Zm06circ00013 |
Organism | Zea mays |
Position | chr6: 30483180-30483880 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | CIRI2 |
Parent gene | Zm00001d035512 |
Parent gene annotation |
Putative AP2/EREBP transcription factor superfamily protein |
Parent gene strand | + |
Alternative splicing | Zm00001d035512_circ_g.3 Zm00001d035512_circ_g.4 Zm00001d035512_circ_g.5 Zm00001d035512_circ_g.6 |
Support reads | NA |
Tissues | leaf, endosperm |
Exon boundary | Yes-No |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d035512_T001:2 Zm00001d035512_T003:1 Zm00001d035512_T002:2 |
Conservation Information | |
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Conserved circRNAs | osa_circ_026353 |
PMCS | 0.301205912 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Han et al., 2020 |