Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d021810_circ_g.2 |
ID in PlantcircBase | zma_circ_009442 |
Alias | Zm07circ00083, zma_circ_0002549, GRMZM2G434317_C1 |
Organism | Zea mays |
Position | chr7: 163435381-163435938 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | CIRI2, find_circ |
Parent gene | Zm00001d021810 |
Parent gene annotation |
Protein STRUBBELIG-RECEPTOR FAMILY 1 |
Parent gene strand | - |
Alternative splicing | Zm00001d021810_circ_g.1 |
Support reads | NA |
Tissues | leaf, endosperm, root |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d021810_T003:1 Zm00001d021810_T004:1 Zm00001d021810_T002:1 Zm00001d021810_T007:2 Zm00001d021810_T001:2 Zm00001d021810_T006:1 Zm00001d021810_T005:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.176889946 |
Functional Information | |
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Coding potential | Y |
Potential coding position |
163435914-163435420(+) |
Potential amino acid sequence |
MPHPWIRSFFVIVEPPNVCTPR*(+) |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to drought stress |
Other Information | |
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References | Han et al., 2020; Ma et al., 2021b;Zhang et al., 2019 |