Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Os11g0163100_circ_g.16 |
ID in PlantcircBase | osa_circ_008545 |
Alias | NA |
Organism | Oryza sativa |
Position | chr11: 3081037-3081248 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | u-circRNA |
Identification method | CIRCexplorer |
Parent gene | Os11g0163100 |
Parent gene annotation |
Similar to Actin 7 (Actin 2). (Os11t0163100-01) |
Parent gene strand | + |
Alternative splicing | Os11g0163100_circ_g.11 Os11g0163100_circ_g.12 Os11g0163100_circ_g.13 Os11g0163100_circ_g.14 Os11g0163100_circ_g.15 |
Support reads | 1 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | GA-AT |
Number of exons covered | Os11t0163100-01:1 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.123034591 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chu et al., 2017 |