Plant Circular RNA Database

Detail information of Os01g0356400_circ_g.7

			
						 General Information
					
						CircRNA Name
						Os01g0356400_circ_g.7
					
						ID in PlantcircBase
						osa_circ_001690
					
						Alias
						Os01circ11062/Os_ciR1754
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr1: 14350674-14351752  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, PcircRNA_finder, SMALT, Segemehl, find_circ
					
						Parent gene
						
							Os01g0356400						
					
						Parent gene annotation
						
							Similar to multidrug resistance protein ABC transporter family. 
(Os01t0356400-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os01g0356400_circ_g.6 Os01g0356400_circ_g.8 Os01g0356400_circ_g.9 						
					
						Support reads
						17/8/21
					
						Tissues
						leaf/root/shoot, root, seed
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os01t0356400-01:2

General Information
CircRNA Name	Os01g0356400_circ_g.7
ID in PlantcircBase	osa_circ_001690
Alias	Os01circ11062/Os_ciR1754
Organism	Oryza sativa
Position	chr1: 14350674-14351752 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, PcircRNA_finder, SMALT, Segemehl, find_circ
Parent gene	Os01g0356400
Parent gene annotation	Similar to multidrug resistance protein ABC transporter family. (Os01t0356400-01)
Parent gene strand	-
Alternative splicing	Os01g0356400_circ_g.6 Os01g0356400_circ_g.8 Os01g0356400_circ_g.9
Support reads	17/8/21
Tissues	leaf/root/shoot, root, seed
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os01t0356400-01:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCCCAGCGCCGCCGTCACCGGCGGGCC
CAAGTACAAGTACAGCAATCCCAGCGCCACCCCAACctcgccggagatcttgcgcatctcgccg
aggatgcaacccagcagcgacgacttgccggagccgaccatgccgacgacggccgccagcgtgc
cagcgcgg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 191
Transcript exons: 14350674-14350748,14351637-14351752
CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG
ACCATGCCGACCGGTTGTTCCGCCGCGCCCCCGCCAGCACGAACATCATCACCGCCACCACACC
GCCCAGCGCCGCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC
Transcript length: 199
Transcript exons: 14350674-14350701,14351582-14351752
CTCGCCGGAGATCTTGCGCATCTCGCCGCTCGTTCGTCGCCTTCATCCGCTTGTCTCGCTCCGT
CATCAGCCGGAACTGGTACCGGTTGTTCCGCCGCGCCCCCGCCAGCACGAACATCATCACCGCC
ACCACACCGCCCAGCGCCGCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCGCCA
CCCCAAC
Transcript length: 209
Transcript exons: 14350674-14350816,14351687-14351752
CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG
ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG
CCTGCTGCCCTGCCGACCGCCCAGCGCCGCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAAT
CCCAGCGCCACCCCAAC
Transcript length: 228
Transcript exons: 14350674-14350801,14351653-14351752
CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG
ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG
CCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCCCAGCGCCGCCGTCACCGGCGGGCC
CAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC
Transcript length: 243
Transcript exons: 14350674-14350801,14351638-14351752
CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG
ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG
GGTTGTTCCGCCGCGCCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCCCAGCGCCGC
CGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC
Transcript length: 252
Transcript exons: 14350674-14350786,14351614-14351752
CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG
ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGACCGTCATCAGCCGGA
ACTGGTACCGGTTGTTCCGCCGCGCCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCC
CAGCGCCGCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC
Transcript length: 263
Transcript exons: 14350674-14350747,14351564-14351752
CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG
ACCATGCCGACCGCATGTAGTTGAGCATCTCGTTCGTCGCCTTCATCCGCTTGTCTCGCTCCGT
CATCAGCCGGAACTGGTACCGGTTGTTCCGCCGCGCCCCCGCCAGCACGAACATCATCACCGCC
ACCACACCGCCCAGCGCCGCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCGCCA
CCCCAAC
Transcript length: 266
Transcript exons: 14350674-14350786,14351584-14351684,14351701-14351752
CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG
ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGACGTTCGTCGCCTTCA
TCCGCTTGTCTCGCTCCGTCATCAGCCGGAACTGGTACCGGTTGTTCCGCCGCGCCCCCGCCAG
CACGAACATCATCACCGCCACCCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCG
CCACCCCAAC
Transcript length: 292
Transcript exons: 14350674-14350803,14351591-14351752
CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG
ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG
CCCGCCTTCATCCGCTTGTCTCGCTCCGTCATCAGCCGGAACTGGTACCGGTTGTTCCGCCGCG
CCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCCCAGCGCCGCCGTCACCGGCGGGCC
CAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC
Transcript length: 292
Transcript exons: 14350674-14350817,14351605-14351752
CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG
ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG
CCTGCTGCCCTGCCGCTGTCTCGCTCCGTCATCAGCCGGAACTGGTACCGGTTGTTCCGCCGCG
CCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCCCAGCGCCGCCGTCACCGGCGGGCC
CAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC
Transcript length: 297
Transcript exons: 14350674-14350818,14351601-14351752
CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG
ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG
CCTGCTGCCCTGCCGCCCGCTTGTCTCGCTCCGTCATCAGCCGGAACTGGTACCGGTTGTTCCG
CCGCGCCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCCCAGCGCCGCCGTCACCGGC
GGGCCCAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC
Transcript length: 314
Transcript exons: 14350674-14350816,14351582-14351752
CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG
ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG
CCTGCTGCCCTGCCGCTCGTTCGTCGCCTTCATCCGCTTGTCTCGCTCCGTCATCAGCCGGAAC
TGGTACCGGTTGTTCCGCCGCGCCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCCCA
GCGCCGCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC
Transcript length: 325
Transcript exons: 14350674-14350818,14351573-14351752
CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG
ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG
CCTGCTGCCCTGCCGCCGTTGAGCATCTCGTTCGTCGCCTTCATCCGCTTGTCTCGCTCCGTCA
TCAGCCGGAACTGGTACCGGTTGTTCCGCCGCGCCCCCGCCAGCACGAACATCATCACCGCCAC
CACACCGCCCAGCGCCGCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCGCCACC
CCAAC
Transcript length: 759
Transcript exons: 14350674-14350935,14351256-14351752
CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG
ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG
CCTGCTGCCCTGCCGCCTCCTCCTCCTCCTCCCACGCGAACTCCCCACCTCTCACCCGCACGGC
CGTCATCCCCGCCCCCACCGCCGGTCCCCGCTCCACCGCGCCCTCGTCCAGCTCCGCGCTCGTC
ATGTACGAGTCGAGACGGCCGAGAGAGACCATGGCCTGGGAGACCTGGATGATGGACTGGGGGA
AGTTGCGCATGGGCTCCTGGAGGATCTTGAAGAAGGAGGTGGCGGTGAAGACGAGGCCGGCGTC
GAGGCGGACACCGAGGAGGACGGAGGTGGCGAAGACGAGAGCGGCGATGGCGATGGGGGCGCTC
CAGAGCGCGATGATGTTGCCCGAGATGGAGTACATGAAGCGGGTGAGCCACCCGAACTCGCCGC
GCCGGAACGCCTCGATGCGGGCGCTGAAGTGCTCTTCCCACGCCTGGAACTTGATCACCCGCAT
GTAGTTGAGCATCTCGTTCGTCGCCTTCATCCGCTTGTCTCGCTCCGTCATCAGCCGGAACTGG
TACCGGTTGTTCCGCCGCGCCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCCCAGCG
CCGCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC
						
					

						Genomic sequence
						
							CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG
ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG
CCTGCTGCCCTGCCGCCTCCTCCTCCTCCTCCCACGCGAACTCCCCACCTCTCACCCGCACGGC
CGTCATCCCCGCCCCCACCGCCGGTCCCCGCTCCACCGCGCCCTCGTCCAGCTCCGCGCTCGTC
ATGTACCTGCAATCGATTGCAACACAATACAATGTTGAACAGTAGCTAGTCACTCAGTTTTAGG
CTATAAGACATTTTGACTTGCTTTAAGTTTGATTAAGTTCATAGAAAAAAGTAGTAACATTTTC
AACCCAAGACAAATTTATTATAAAAATATATTAATTATTTATTTGATGAAACTAATTTAGTATT
ATAAATATTAATATATTTGTCTATAAATTTAGTTAAAAATTTAAAACAGTTTGACTTTAACCAA
AGTCAAAATATCTTATAACCTGACTACGTACTATTTAAAGAGAGATCTATGTATAGGGGAGTGG
GCTTACGAGTCGAGACGGCCGAGAGAGACCATGGCCTGGGAGACCTGGATGATGGACTGGGGGA
AGTTGCGCATGGGCTCCTGGAGGATCTTGAAGAAGGAGGTGGCGGTGAAGACGAGGCCGGCGTC
GAGGCGGACACCGAGGAGGACGGAGGTGGCGAAGACGAGAGCGGCGATGGCGATGGGGGCGCTC
CAGAGCGCGATGATGTTGCCCGAGATGGAGTACATGAAGCGGGTGAGCCACCCGAACTCGCCGC
GCCGGAACGCCTCGATGCGGGCGCTGAAGTGCTCTTCCCACGCCTGGAACTTGATCACCCGCAT
GTAGTTGAGCATCTCGTTCGTCGCCTTCATCCGCTTGTCTCGCTCCGTCATCAGCCGGAACTGG
TACCGGTTGTTCCGCCGCGCCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCCCAGCG
CCGCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC
						
					

			
		

Sequences
Splice junction sequence	CCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCCCAGCGCCGCCGTCACCGGCGGGCC CAAGTACAAGTACAGCAATCCCAGCGCCACCCCAACctcgccggagatcttgcgcatctcgccg aggatgcaacccagcagcgacgacttgccggagccgaccatgccgacgacggccgccagcgtgc cagcgcgg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 191 Transcript exons: 14350674-14350748,14351637-14351752 CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG ACCATGCCGACCGGTTGTTCCGCCGCGCCCCCGCCAGCACGAACATCATCACCGCCACCACACC GCCCAGCGCCGCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC Transcript length: 199 Transcript exons: 14350674-14350701,14351582-14351752 CTCGCCGGAGATCTTGCGCATCTCGCCGCTCGTTCGTCGCCTTCATCCGCTTGTCTCGCTCCGT CATCAGCCGGAACTGGTACCGGTTGTTCCGCCGCGCCCCCGCCAGCACGAACATCATCACCGCC ACCACACCGCCCAGCGCCGCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCGCCA CCCCAAC Transcript length: 209 Transcript exons: 14350674-14350816,14351687-14351752 CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG CCTGCTGCCCTGCCGACCGCCCAGCGCCGCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAAT CCCAGCGCCACCCCAAC Transcript length: 228 Transcript exons: 14350674-14350801,14351653-14351752 CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG CCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCCCAGCGCCGCCGTCACCGGCGGGCC CAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC Transcript length: 243 Transcript exons: 14350674-14350801,14351638-14351752 CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG GGTTGTTCCGCCGCGCCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCCCAGCGCCGC CGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC Transcript length: 252 Transcript exons: 14350674-14350786,14351614-14351752 CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGACCGTCATCAGCCGGA ACTGGTACCGGTTGTTCCGCCGCGCCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCC CAGCGCCGCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC Transcript length: 263 Transcript exons: 14350674-14350747,14351564-14351752 CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG ACCATGCCGACCGCATGTAGTTGAGCATCTCGTTCGTCGCCTTCATCCGCTTGTCTCGCTCCGT CATCAGCCGGAACTGGTACCGGTTGTTCCGCCGCGCCCCCGCCAGCACGAACATCATCACCGCC ACCACACCGCCCAGCGCCGCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCGCCA CCCCAAC Transcript length: 266 Transcript exons: 14350674-14350786,14351584-14351684,14351701-14351752 CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGACGTTCGTCGCCTTCA TCCGCTTGTCTCGCTCCGTCATCAGCCGGAACTGGTACCGGTTGTTCCGCCGCGCCCCCGCCAG CACGAACATCATCACCGCCACCCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCG CCACCCCAAC Transcript length: 292 Transcript exons: 14350674-14350803,14351591-14351752 CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG CCCGCCTTCATCCGCTTGTCTCGCTCCGTCATCAGCCGGAACTGGTACCGGTTGTTCCGCCGCG CCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCCCAGCGCCGCCGTCACCGGCGGGCC CAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC Transcript length: 292 Transcript exons: 14350674-14350817,14351605-14351752 CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG CCTGCTGCCCTGCCGCTGTCTCGCTCCGTCATCAGCCGGAACTGGTACCGGTTGTTCCGCCGCG CCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCCCAGCGCCGCCGTCACCGGCGGGCC CAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC Transcript length: 297 Transcript exons: 14350674-14350818,14351601-14351752 CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG CCTGCTGCCCTGCCGCCCGCTTGTCTCGCTCCGTCATCAGCCGGAACTGGTACCGGTTGTTCCG CCGCGCCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCCCAGCGCCGCCGTCACCGGC GGGCCCAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC Transcript length: 314 Transcript exons: 14350674-14350816,14351582-14351752 CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG CCTGCTGCCCTGCCGCTCGTTCGTCGCCTTCATCCGCTTGTCTCGCTCCGTCATCAGCCGGAAC TGGTACCGGTTGTTCCGCCGCGCCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCCCA GCGCCGCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC Transcript length: 325 Transcript exons: 14350674-14350818,14351573-14351752 CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG CCTGCTGCCCTGCCGCCGTTGAGCATCTCGTTCGTCGCCTTCATCCGCTTGTCTCGCTCCGTCA TCAGCCGGAACTGGTACCGGTTGTTCCGCCGCGCCCCCGCCAGCACGAACATCATCACCGCCAC CACACCGCCCAGCGCCGCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCGCCACC CCAAC Transcript length: 759 Transcript exons: 14350674-14350935,14351256-14351752 CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG CCTGCTGCCCTGCCGCCTCCTCCTCCTCCTCCCACGCGAACTCCCCACCTCTCACCCGCACGGC CGTCATCCCCGCCCCCACCGCCGGTCCCCGCTCCACCGCGCCCTCGTCCAGCTCCGCGCTCGTC ATGTACGAGTCGAGACGGCCGAGAGAGACCATGGCCTGGGAGACCTGGATGATGGACTGGGGGA AGTTGCGCATGGGCTCCTGGAGGATCTTGAAGAAGGAGGTGGCGGTGAAGACGAGGCCGGCGTC GAGGCGGACACCGAGGAGGACGGAGGTGGCGAAGACGAGAGCGGCGATGGCGATGGGGGCGCTC CAGAGCGCGATGATGTTGCCCGAGATGGAGTACATGAAGCGGGTGAGCCACCCGAACTCGCCGC GCCGGAACGCCTCGATGCGGGCGCTGAAGTGCTCTTCCCACGCCTGGAACTTGATCACCCGCAT GTAGTTGAGCATCTCGTTCGTCGCCTTCATCCGCTTGTCTCGCTCCGTCATCAGCCGGAACTGG TACCGGTTGTTCCGCCGCGCCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCCCAGCG CCGCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC
Genomic sequence	CTCGCCGGAGATCTTGCGCATCTCGCCGAGGATGCAACCCAGCAGCGACGACTTGCCGGAGCCG ACCATGCCGACGACGGCCGCCAGCGTGCCAGCGCGGACGTCGATGTCGATCCCGCGCAGCACCG CCTGCTGCCCTGCCGCCTCCTCCTCCTCCTCCCACGCGAACTCCCCACCTCTCACCCGCACGGC CGTCATCCCCGCCCCCACCGCCGGTCCCCGCTCCACCGCGCCCTCGTCCAGCTCCGCGCTCGTC ATGTACCTGCAATCGATTGCAACACAATACAATGTTGAACAGTAGCTAGTCACTCAGTTTTAGG CTATAAGACATTTTGACTTGCTTTAAGTTTGATTAAGTTCATAGAAAAAAGTAGTAACATTTTC AACCCAAGACAAATTTATTATAAAAATATATTAATTATTTATTTGATGAAACTAATTTAGTATT ATAAATATTAATATATTTGTCTATAAATTTAGTTAAAAATTTAAAACAGTTTGACTTTAACCAA AGTCAAAATATCTTATAACCTGACTACGTACTATTTAAAGAGAGATCTATGTATAGGGGAGTGG GCTTACGAGTCGAGACGGCCGAGAGAGACCATGGCCTGGGAGACCTGGATGATGGACTGGGGGA AGTTGCGCATGGGCTCCTGGAGGATCTTGAAGAAGGAGGTGGCGGTGAAGACGAGGCCGGCGTC GAGGCGGACACCGAGGAGGACGGAGGTGGCGAAGACGAGAGCGGCGATGGCGATGGGGGCGCTC CAGAGCGCGATGATGTTGCCCGAGATGGAGTACATGAAGCGGGTGAGCCACCCGAACTCGCCGC GCCGGAACGCCTCGATGCGGGCGCTGAAGTGCTCTTCCCACGCCTGGAACTTGATCACCCGCAT GTAGTTGAGCATCTCGTTCGTCGCCTTCATCCGCTTGTCTCGCTCCGTCATCAGCCGGAACTGG TACCGGTTGTTCCGCCGCGCCCCCGCCAGCACGAACATCATCACCGCCACCACACCGCCCAGCG CCGCCGTCACCGGCGGGCCCAAGTACAAGTACAGCAATCCCAGCGCCACCCCAAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_002041* osi_circ_009415 						
					
						PMCS
						0.611724147

Conservation Information
Conserved circRNAs	osi_circ_002041* osi_circ_009415
PMCS	0.611724147

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							14351676-14350676(-)
						
						Potential amino acid sequence
						
							MMFVLAGARRNNRYQFRLMTERDKRMKATNEMLNYMRVIKFQAWEEHFSARIEAFRRGEFGWLT
RFMYSISGNIIALWSAPIAIAALVFATSVLLGVRLDAGLVFTATSFFKILQEPMRNFPQSIIQV
SQAMVSLGRLDSYMTSAELDEGAVERGPAVGAGMTAVRVRGGEFAWEEEEEAAGQQAVLRGIDI
DVRAGTLAAVVGMVGSGKSSLLGCILGEMRKISGEVGVALGLLYLYLGPPVTAALGGVVAVMMF
VLAGARRNNRYQFRLMTERDKRMKATNEMLNYMRVIKFQAWEEHFSARIEAFRRGEFGWLTRFM
YSISGNIIALWSAPIAIAALVFATSVLLGVRLDAGLVFTATSFFKILQEPMRNFPQSIIQVSQA
MVSLGRLDSYMTSAELDEGAVERGPAVGAGMTAVRVRGGEFAWEEEEEAAGQQAVLRGIDIDVR
AGTLAAVVGMVGSGKSSLLGCILGEMRKISGEVGVALGLLYLYLGPPVTAALGGVVAVMMFVLA
GARRNNRYQFRLMTERDKRMKATNEMLNYMRVIKFQAWEEHFSARIEAFRRGEFGWLTRFMYSI
SGNIIALWSAPIAIAALVFATSVLLGVRLDAGLVFTATSFFKILQEPMRNFPQSIIQVSQAMVS
LGRLDSYMTSAELDEGAVERGPAVGAGMTAVRVRGGEFAWEEEEEAAGQQAVLRGIDIDVRAGT
LAAVVGMVGSGKSSLLGCILGEMRKISGEVGVALGLLYLYLGPPVTAALGGVVAVMMFVLAGAR
RNNRYQFRLMTERDKRMKATNEMLNYMRVIKFQAWEEHFSARIEAFRRGEFGWLTRFMYSISGN
IIALWSAPIAIAALVFATSVLLGVRLDAGLVFTATSFFKILQEPMRNFPQSIIQVSQAMVSLGR
LDSYMTSAELDEGAVERGPAVGAGMTAVRVRGGEFAWEEEEEAAGQQAVLRGIDIDVRAGTLAA
VVGMVGSGKSSLLGCILGEMRKISGE(-)
						
						Sponge-miRNAs
						
							osa-miR2925 						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	14351676-14350676(-)
Potential amino acid sequence	MMFVLAGARRNNRYQFRLMTERDKRMKATNEMLNYMRVIKFQAWEEHFSARIEAFRRGEFGWLT RFMYSISGNIIALWSAPIAIAALVFATSVLLGVRLDAGLVFTATSFFKILQEPMRNFPQSIIQV SQAMVSLGRLDSYMTSAELDEGAVERGPAVGAGMTAVRVRGGEFAWEEEEEAAGQQAVLRGIDI DVRAGTLAAVVGMVGSGKSSLLGCILGEMRKISGEVGVALGLLYLYLGPPVTAALGGVVAVMMF VLAGARRNNRYQFRLMTERDKRMKATNEMLNYMRVIKFQAWEEHFSARIEAFRRGEFGWLTRFM YSISGNIIALWSAPIAIAALVFATSVLLGVRLDAGLVFTATSFFKILQEPMRNFPQSIIQVSQA MVSLGRLDSYMTSAELDEGAVERGPAVGAGMTAVRVRGGEFAWEEEEEAAGQQAVLRGIDIDVR AGTLAAVVGMVGSGKSSLLGCILGEMRKISGEVGVALGLLYLYLGPPVTAALGGVVAVMMFVLA GARRNNRYQFRLMTERDKRMKATNEMLNYMRVIKFQAWEEHFSARIEAFRRGEFGWLTRFMYSI SGNIIALWSAPIAIAALVFATSVLLGVRLDAGLVFTATSFFKILQEPMRNFPQSIIQVSQAMVS LGRLDSYMTSAELDEGAVERGPAVGAGMTAVRVRGGEFAWEEEEEAAGQQAVLRGIDIDVRAGT LAAVVGMVGSGKSSLLGCILGEMRKISGEVGVALGLLYLYLGPPVTAALGGVVAVMMFVLAGAR RNNRYQFRLMTERDKRMKATNEMLNYMRVIKFQAWEEHFSARIEAFRRGEFGWLTRFMYSISGN IIALWSAPIAIAALVFATSVLLGVRLDAGLVFTATSFFKILQEPMRNFPQSIIQVSQAMVSLGR LDSYMTSAELDEGAVERGPAVGAGMTAVRVRGGEFAWEEEEEAAGQQAVLRGIDIDVRAGTLAA VVGMVGSGKSSLLGCILGEMRKISGE(-)
Sponge-miRNAs	osa-miR2925
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Lu et al., 2015;Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os01g0356400_circ_g.7

Address

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