Plant Circular RNA Database

Detail information of AT4G33090_circ_g.1

			
						 General Information
					
						CircRNA Name
						AT4G33090_circ_g.1
					
						ID in PlantcircBase
						ath_circ_034305
					
						Alias
						Ath_circ_FC5329
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr4: 15966449-15969882  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, PcircRNA_finder
					
						Parent gene
						
							AT4G33090						
					
						Parent gene annotation
						
							Aminopeptidase
							
						Parent gene strand
						-
					
						Alternative splicing
						
							AT4G33090_circ_g.2 AT4G33090_circ_g.3 AT4G33090_circ_g.4 AT4G33090_circ_g.5 AT4G33090_circ_g.6 AT4G33090_circ_g.7 AT4G33090_circ_g.8 AT4G33090_circ_g.9 AT4G33090_circ_g.10 						
					
						Support reads
						16
					
						Tissues
						whole_plant
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT4G33090.1:15

General Information
CircRNA Name	AT4G33090_circ_g.1
ID in PlantcircBase	ath_circ_034305
Alias	Ath_circ_FC5329
Organism	Arabidpsis thaliana
Position	chr4: 15966449-15969882 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	CIRCexplorer, PcircRNA_finder
Parent gene	AT4G33090
Parent gene annotation	Aminopeptidase
Parent gene strand	-
Alternative splicing	AT4G33090_circ_g.2 AT4G33090_circ_g.3 AT4G33090_circ_g.4 AT4G33090_circ_g.5 AT4G33090_circ_g.6 AT4G33090_circ_g.7 AT4G33090_circ_g.8 AT4G33090_circ_g.9 AT4G33090_circ_g.10
Support reads	16
Tissues	whole_plant
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT4G33090.1:15

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CAAGTTTCAGAACTCCCACTCCATGGGGAAGAATCTCACCAAACTCAAGCACGAGAATCTCATC
CTCCTCAAACAAGACAACTTTTGGAGCTGCAAGCGCctcatcagacaatacgaagttaagaaca
tcttgaactatagtggggtctgggcaagatgctaaagaacctgcaaagtcacaaaggaaacatt
actacttg

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTCATCAGACAATACGAAGTTAAGAACATCTTGAACTATAGTGGGGTCTGGGCAAGATGCTAAA
GAACCTGCAAAGTCACAAAGGAAACATTACTACTTGAACCACAAATTTTTATTTATTTTATTTT
TCAGGTACGAGACCAAAGTTTGCAGTCAAGTTACCTAAGATTCGTGTTTTCTCTTGGCTCAGGT
CGGTTTCCCTATAAACTCTCAGAAGAGACTCATAACCAGATTTGTCTGATTTGTTAGCTCTCTG
CATTACAGCAACATAAGCAGCCTGCAAACACAAAACCCATACAGAAATTAATAAAAAGGTTCAC
CATTCCAGTTTCAAAGTGTTATCGGGTTCTATGAAAAGAAACAAACCCTTCTAATGTCAGGAGG
CAGAAGCGGAGTGTTCCTATCAGCCAAAAATGCATCAAATCTTCGAACTGCTTCCTTTAGTGTC
TCATCATGCCCAAACACAGCAAGTGCAGTTAAGACTTCCCCTCTCAGCATAGCATCTAGATGGC
TCTCGCCTTGCTTAGGATCCCAACCAAGTTTCCTGTAAGAACAATCAGCATTGTAACGACATTG
TTTTTTTTTTGTTTAGTAAAACAGAACATTAGTCTAAATTCTGGAGATGCGTAAAACAGCTTAC
CCAGCAGCAAACTGGAAAACGCCAATGAAGAAATGTTTAATCCCAGACATCAGTTCTTGATTTG
CATCTGCTCCAATCTTCACAACTTTGTAGCTTATCTGTATGGAAGAAGAGTAAGAGCCAGAAGC
AAAAGCAAACTTATGGACCAGGGAATTTAAAGACAGAAAGGGGAGATCCTTACAGCAATAAGAT
TTGACAGCACAGTATAGTCAAGTTCCTTCTTGTAAGCACTACACAAAGTGAGCAATGAGGCCAG
TGATTGCTGACGAGCCATAGTAAGTGCAAACGAATCATCCAAAATACCTGTGAAATACAAAGTA
GGATATCTATCTCCAAAGAAATTTCATTCTGTCAACCAGAAAACAAAATTCTGCAAGGTTGAAT
TACCATATCTATCGATAGAAGTCAAGCTTTGGCTCTCTGTTGCATTTCTGAGTCCAGCCGCAAG
GCTGTCATCATATTTCACCCTATAGAATCCAGCCTGATCAACATTGATTTTTATCCAAGAACAT
GTCCCATTAATTTTGTCGCTACCATCGGCAATGGAGCAGCCCAATAATTCCTTTAAATCATACG
CTCCAGATTTGGATTCTAATAAGAAGTTTTTGCGCTTTTCATATGAACCACAACACAAGGTCAC
TGGTACAATCCATTGTCCTTCCCCAGGAGAACCACTTGACAAGAATCGAGACTGAAAATTTCAA
ATGAATTTCGTTACTTAATCATGCACAATATCCCAAAGTGGTATAAACAGAACATCCAGAAAGG
GAAATAAGTCTAAGTACCTGCTCGAGTTCCAATTTTCCATCTTTTATTTTGGCTGAGACGACAG
GATATCCTTTTTGCTTTGTCCAAGAACTCATAAGCTTGTTCACAGGTTCTCCGGATCCCGCTTC
CAAAGCAGCCCATAAATCTTCTGTCTTCGCGTTTGAATAAGCGTGATTTTTAATGTATGCAGCA
AGAGACTTCTGCTCACCAAAAGCCAAACAAGTAGGGTAAGATGTTTTGGAGACATTAGTGAAAC
TGGAACTAGAAGCCACCATATTTACATGCATAATATAAACGCTGCAATTCTTTTGTAACTGAAG
AAATGGGCATGAGAGCGAACCTGAAAAACCTCAGCACCAAGATAGCTTTGTAGCATGCGGATGA
CAGATGCACCCTTTCTGTAGCTTATTGCATCAAATATTTCATCAATTTCAGCAGCATGATTAAC
CTCCACCTGGGGAAATTTATGGACTTATGACAAATAGGCAATAGGGTATCTCTGGGATCGATAG
TGAAATTAAGGAAAACCGACATTATTCTGTGAAGACATATTGACAGCATTTTGGTTACCTCTAT
CGGGTGAGACTCCTCAAGCCCATCTAGCCTTAGACCCTCAGTAGATTCATCTAAAAACTGGGTC
CAGATTTTCCATTCAGGGAACAAACTATCAGTAGCCAAGTAGCTGACCTGAAACAGATAAAGAG
TAACAATATATTCACAACAAAACTCAAAATCATTGTTAATACTAAGACCTAAGTTTGCAATGTA
CCCAAGTAGCAAAACCCTCATTCAGCCATAGATGAGTCCACCACTCCATAGTAACAAGATTGCC
AAACCACTGGTGGGCCAGTTCATGAGCAACTACAGTGGCAACCTAGCAGCAGAAATTTAACTGC
TTTAGATAATTGCACAAGAGAGCACAAGACAATTTCCTCTAGAGAATAAATGGACATGTTTACA
GTACCCTCTGTTTGTTAGAAGCAGCTGAATGTTGTTCATCATAGAGAAGAGCTGTTTCACGGTA
TGTAACTAAACCATAATTCTCCATAGCTCCGGCAGCAAAATCTGGTATTGCAATCATATCCATT
TTGGGAAGGGGATATGGCACAGCAAAGTACCTACAAGAATGATTGGACTTATGCAATGAGATGA
TACATCCATTAAAGAAGCTCAGAAATATGCATGCACATAAAGTTTCAAATGTCAACGAAGGACC
TACTCTTTGAACAGATCCAATGTCTTGGCACCAACATGCAATGCAAATTTCCCTTGGTCGGCTT
TGCCCACTTGACAGTATACTCTGACTTTAATCCCTGAGAAAAAGATGAAACTTGATTTAGAGCT
TCTCGACTTGACTAGACGGGAGATAATAATGGATAAAATTAATTTACCATCGGATGTATGATCT
TCCACGTAGTCAAACAAACCAACAACAATTGCTACCAAATATGTAGACATGATTGGTGACTCTT
GATAGGAGACAATCTTCAGATTCCCATTGACTTTCTCCTCCATTATTGGCATATTGGAGAGAGC
CACCAAATCAGTTGGCACCTCTAATGTAATCTTGAAGGTAGCCTGTTGAACAATGTGTCAATAT
TGATAGATAAAGACAGAAGAAGAACAAAATCACCAACTTGATAAACTCATGCTGATAGAAAGAG
GAGGGAATGAGAAAGAACAAGTGGAAACCTTGCAAGCAGGTTCATCCCAACATGGAAAGCATCT
CCTAGCATCAGCTGGTTCAAACTGGGTAACTGCCATATTCTTCTTCTCACCGTTATGTTCATAA
GTACTGCCACCAAGACAAATACAAGATCGTTCTAGAATTAATCTCGAGCTATCTAACAGTAAAA
AAAGATCGAAACTCATTGCTTTACCTTCTGTAGAATCCCTTCATTTTGTCATTTAGTACTCCAT
TGAAACCAAGTTTCAGAACTCCCACTCCATGGGGAAGAATCTCACCAAACTCAAGCACGAGAAT
CTCATCCTCCTCAAACAAGACAACTTTTGGAGCTGCAAGCGC
						
					

			
		

Sequences
Splice junction sequence	CAAGTTTCAGAACTCCCACTCCATGGGGAAGAATCTCACCAAACTCAAGCACGAGAATCTCATC CTCCTCAAACAAGACAACTTTTGGAGCTGCAAGCGCctcatcagacaatacgaagttaagaaca tcttgaactatagtggggtctgggcaagatgctaaagaacctgcaaagtcacaaaggaaacatt actacttg
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTCATCAGACAATACGAAGTTAAGAACATCTTGAACTATAGTGGGGTCTGGGCAAGATGCTAAA GAACCTGCAAAGTCACAAAGGAAACATTACTACTTGAACCACAAATTTTTATTTATTTTATTTT TCAGGTACGAGACCAAAGTTTGCAGTCAAGTTACCTAAGATTCGTGTTTTCTCTTGGCTCAGGT CGGTTTCCCTATAAACTCTCAGAAGAGACTCATAACCAGATTTGTCTGATTTGTTAGCTCTCTG CATTACAGCAACATAAGCAGCCTGCAAACACAAAACCCATACAGAAATTAATAAAAAGGTTCAC CATTCCAGTTTCAAAGTGTTATCGGGTTCTATGAAAAGAAACAAACCCTTCTAATGTCAGGAGG CAGAAGCGGAGTGTTCCTATCAGCCAAAAATGCATCAAATCTTCGAACTGCTTCCTTTAGTGTC TCATCATGCCCAAACACAGCAAGTGCAGTTAAGACTTCCCCTCTCAGCATAGCATCTAGATGGC TCTCGCCTTGCTTAGGATCCCAACCAAGTTTCCTGTAAGAACAATCAGCATTGTAACGACATTG TTTTTTTTTTGTTTAGTAAAACAGAACATTAGTCTAAATTCTGGAGATGCGTAAAACAGCTTAC CCAGCAGCAAACTGGAAAACGCCAATGAAGAAATGTTTAATCCCAGACATCAGTTCTTGATTTG CATCTGCTCCAATCTTCACAACTTTGTAGCTTATCTGTATGGAAGAAGAGTAAGAGCCAGAAGC AAAAGCAAACTTATGGACCAGGGAATTTAAAGACAGAAAGGGGAGATCCTTACAGCAATAAGAT TTGACAGCACAGTATAGTCAAGTTCCTTCTTGTAAGCACTACACAAAGTGAGCAATGAGGCCAG TGATTGCTGACGAGCCATAGTAAGTGCAAACGAATCATCCAAAATACCTGTGAAATACAAAGTA GGATATCTATCTCCAAAGAAATTTCATTCTGTCAACCAGAAAACAAAATTCTGCAAGGTTGAAT TACCATATCTATCGATAGAAGTCAAGCTTTGGCTCTCTGTTGCATTTCTGAGTCCAGCCGCAAG GCTGTCATCATATTTCACCCTATAGAATCCAGCCTGATCAACATTGATTTTTATCCAAGAACAT GTCCCATTAATTTTGTCGCTACCATCGGCAATGGAGCAGCCCAATAATTCCTTTAAATCATACG CTCCAGATTTGGATTCTAATAAGAAGTTTTTGCGCTTTTCATATGAACCACAACACAAGGTCAC TGGTACAATCCATTGTCCTTCCCCAGGAGAACCACTTGACAAGAATCGAGACTGAAAATTTCAA ATGAATTTCGTTACTTAATCATGCACAATATCCCAAAGTGGTATAAACAGAACATCCAGAAAGG GAAATAAGTCTAAGTACCTGCTCGAGTTCCAATTTTCCATCTTTTATTTTGGCTGAGACGACAG GATATCCTTTTTGCTTTGTCCAAGAACTCATAAGCTTGTTCACAGGTTCTCCGGATCCCGCTTC CAAAGCAGCCCATAAATCTTCTGTCTTCGCGTTTGAATAAGCGTGATTTTTAATGTATGCAGCA AGAGACTTCTGCTCACCAAAAGCCAAACAAGTAGGGTAAGATGTTTTGGAGACATTAGTGAAAC TGGAACTAGAAGCCACCATATTTACATGCATAATATAAACGCTGCAATTCTTTTGTAACTGAAG AAATGGGCATGAGAGCGAACCTGAAAAACCTCAGCACCAAGATAGCTTTGTAGCATGCGGATGA CAGATGCACCCTTTCTGTAGCTTATTGCATCAAATATTTCATCAATTTCAGCAGCATGATTAAC CTCCACCTGGGGAAATTTATGGACTTATGACAAATAGGCAATAGGGTATCTCTGGGATCGATAG TGAAATTAAGGAAAACCGACATTATTCTGTGAAGACATATTGACAGCATTTTGGTTACCTCTAT CGGGTGAGACTCCTCAAGCCCATCTAGCCTTAGACCCTCAGTAGATTCATCTAAAAACTGGGTC CAGATTTTCCATTCAGGGAACAAACTATCAGTAGCCAAGTAGCTGACCTGAAACAGATAAAGAG TAACAATATATTCACAACAAAACTCAAAATCATTGTTAATACTAAGACCTAAGTTTGCAATGTA CCCAAGTAGCAAAACCCTCATTCAGCCATAGATGAGTCCACCACTCCATAGTAACAAGATTGCC AAACCACTGGTGGGCCAGTTCATGAGCAACTACAGTGGCAACCTAGCAGCAGAAATTTAACTGC TTTAGATAATTGCACAAGAGAGCACAAGACAATTTCCTCTAGAGAATAAATGGACATGTTTACA GTACCCTCTGTTTGTTAGAAGCAGCTGAATGTTGTTCATCATAGAGAAGAGCTGTTTCACGGTA TGTAACTAAACCATAATTCTCCATAGCTCCGGCAGCAAAATCTGGTATTGCAATCATATCCATT TTGGGAAGGGGATATGGCACAGCAAAGTACCTACAAGAATGATTGGACTTATGCAATGAGATGA TACATCCATTAAAGAAGCTCAGAAATATGCATGCACATAAAGTTTCAAATGTCAACGAAGGACC TACTCTTTGAACAGATCCAATGTCTTGGCACCAACATGCAATGCAAATTTCCCTTGGTCGGCTT TGCCCACTTGACAGTATACTCTGACTTTAATCCCTGAGAAAAAGATGAAACTTGATTTAGAGCT TCTCGACTTGACTAGACGGGAGATAATAATGGATAAAATTAATTTACCATCGGATGTATGATCT TCCACGTAGTCAAACAAACCAACAACAATTGCTACCAAATATGTAGACATGATTGGTGACTCTT GATAGGAGACAATCTTCAGATTCCCATTGACTTTCTCCTCCATTATTGGCATATTGGAGAGAGC CACCAAATCAGTTGGCACCTCTAATGTAATCTTGAAGGTAGCCTGTTGAACAATGTGTCAATAT TGATAGATAAAGACAGAAGAAGAACAAAATCACCAACTTGATAAACTCATGCTGATAGAAAGAG GAGGGAATGAGAAAGAACAAGTGGAAACCTTGCAAGCAGGTTCATCCCAACATGGAAAGCATCT CCTAGCATCAGCTGGTTCAAACTGGGTAACTGCCATATTCTTCTTCTCACCGTTATGTTCATAA GTACTGCCACCAAGACAAATACAAGATCGTTCTAGAATTAATCTCGAGCTATCTAACAGTAAAA AAAGATCGAAACTCATTGCTTTACCTTCTGTAGAATCCCTTCATTTTGTCATTTAGTACTCCAT TGAAACCAAGTTTCAGAACTCCCACTCCATGGGGAAGAATCTCACCAAACTCAAGCACGAGAAT CTCATCCTCCTCAAACAAGACAACTTTTGGAGCTGCAAGCGC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.179191413

Conservation Information
Conserved circRNAs	NA
PMCS	0.179191413

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							15969757-15966451(-)
						
					

						Potential amino acid sequence
						
							MKGFYRSTYEHNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLEVPTDLVALSNMPIME
EKVNGNLKIVSYQESPIMSTYLVAIVVGLFDYVEDHTSDGIKVRVYCQVGKADQGKFALHVGAK
TLDLFKEYFAVPYPLPKMDMIAIPDFAAGAMENYGLVTYRETALLYDEQHSAASNKQRVATVVA
HELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLATDSLFPEWKIWTQFLDESTEGLRLDGLEES
HPIEVEVNHAAEIDEIFDAISYRKGASVIRMLQSYLGAEVFQKSLAAYIKNHAYSNAKTEDLWA
ALEAGSGEPVNKLMSSWTKQKGYPVVSAKIKDGKLELEQSRFLSSGSPGEGQWIVPVTLCCGSY
EKRKNFLLESKSGAYDLKELLGCSIADGSDKINGTCSWIKINVDQAGFYRVKYDDSLAAGLRNA
TESQSLTSIDRYGILDDSFALTMARQQSLASLLTLCSAYKKELDYTVLSNLIAISYKVVKIGAD
ANQELMSGIKHFFIGVFQFAAGKLGWDPKQGESHLDAMLRGEVLTALAVFGHDETLKEAVRRFD
AFLADRNTPLLPPDIRRAAYVAVMQRANKSDKSGYESLLRVYRETDLSQEKTRILGSLASCPDP
TIVQDVLNFVLSDEALAAPKVVLFEEDEILVLEFGEILPHGVGVLKLGFNGVLNDKMKGFYRST
YEHNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLEVPTDLVALSNMPIMEEKVNGNLK
IVSYQESPIMSTYLVAIVVGLFDYVEDHTSDGIKVRVYCQVGKADQGKFALHVGAKTLDLFKEY
FAVPYPLPKMDMIAIPDFAAGAMENYGLVTYRETALLYDEQHSAASNKQRVATVVAHELAHQWF
GNLVTMEWWTHLWLNEGFATWVSYLATDSLFPEWKIWTQFLDESTEGLRLDGLEESHPIEVEVN
HAAEIDEIFDAISYRKGASVIRMLQSYLGAEVFQKSLAAYIKNHAYSNAKTEDLWAALEAGSGE
PVNKLMSSWTKQKGYPVVSAKIKDGKLELEQSRFLSSGSPGEGQWIVPVTLCCGSYEKRKNFLL
ESKSGAYDLKELLGCSIADGSDKINGTCSWIKINVDQAGFYRVKYDDSLAAGLRNATESQSLTS
IDRYGILDDSFALTMARQQSLASLLTLCSAYKKELDYTVLSNLIAISYKVVKIGADANQELMSG
IKHFFIGVFQFAAGKLGWDPKQGESHLDAMLRGEVLTALAVFGHDETLKEAVRRFDAFLADRNT
PLLPPDIRRAAYVAVMQRANKSDKSGYESLLRVYRETDLSQEKTRILGSLASCPDPTIVQDVLN
FVLSDEALAAPKVVLFEEDEILVLEFGEILPHGVGVLKLGFNGVLNDKMKGFYRSTYEHNGEKK
NMAVTQFEPADARRCFPCWDEPACKATFKITLEVPTDLVALSNMPIMEEKVNGNLKIVSYQESP
IMSTYLVAIVVGLFDYVEDHTSDGIKVRVYCQVGKADQGKFALHVGAKTLDLFKEYFAVPYPLP
KMDMIAIPDFAAGAMENYGLVTYRETALLYDEQHSAASNKQRVATVVAHELAHQWFGNLVTMEW
WTHLWLNEGFATWVSYLATDSLFPEWKIWTQFLDESTEGLRLDGLEESHPIEVEVNHAAEIDEI
FDAISYRKGASVIRMLQSYLGAEVFQKSLAAYIKNHAYSNAKTEDLWAALEAGSGEPVNKLMSS
WTKQKGYPVVSAKIKDGKLELEQSRFLSSGSPGEGQWIVPVTLCCGSYEKRKNFLLESKSGAYD
LKELLGCSIADGSDKINGTCSWIKINVDQAGFYRVKYDDSLAAGLRNATESQSLTSIDRYGILD
DSFALTMARQQSLASLLTLCSAYKKELDYTVLSNLIAISYKVVKIGADANQELMSGIKHFFIGV
FQFAAGKLGWDPKQGESHLDAMLRGEVLTALAVFGHDETLKEAVRRFDAFLADRNTPLLPPDIR
RAAYVAVMQRANKSDKSGYESLLRVYRETDLSQEKTRILGSLASCPDPTIVQDVLNFVLSDEAL
AAPKVVLFEEDEILVLEFGEILPHGVGVLKLGFNGVLNDKMKGFYRSTYEHNGEKKNMAVTQFE
PADARRCFPCWDEPACKATFKITLEVPTDLVALSNMPIMEEKVNGNLKIVSYQESPIMSTYLVA
IVVGLFDYVEDHTSDGIKVRVYCQVGKADQGKFALHVGAKTLDLFKEYFAVPYPLPKMDMIAIP
DFAAGAMENYGLVTYRETALLYDEQHSAASNKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNE
GFATWVSYLATDSLFPEWKIWTQFLDESTEGLRLDGLEESHPIEVEVNHAAEIDEIFDAISYRK
GASVIRMLQSYLGAEVFQKSLAAYIKNHAYSNAKTEDLWAALEAGSGEPVNKLMSSWTKQKGYP
VVSAKIKDGKLELEQSRFLSSGSPGEGQWIVPVTLCCGSYEKRKNFLLESKSGAYDLKELLGCS
IADGSDKINGTCSWIKINVDQAGFYRVKYDDSLAAGLRNATESQSLTSIDRYGILDDSFALTMA
RQQSLASLLTLCSAYKKELDYTVLSNLIAISYKVVKIGADANQELMSGIKHFFIGVFQFAAGKL
GWDPKQGESHLDAMLRGEVLTALAVFGHDETLKEAVRRFDAFLADRNTPLLPPDIRRAAYVAVM
QRANKSDKSGYESLLRVYRETDLSQEKTRILGSLASCPDPTIVQDVLNFVLSDE(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	15969757-15966451(-)
Potential amino acid sequence	MKGFYRSTYEHNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLEVPTDLVALSNMPIME EKVNGNLKIVSYQESPIMSTYLVAIVVGLFDYVEDHTSDGIKVRVYCQVGKADQGKFALHVGAK TLDLFKEYFAVPYPLPKMDMIAIPDFAAGAMENYGLVTYRETALLYDEQHSAASNKQRVATVVA HELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLATDSLFPEWKIWTQFLDESTEGLRLDGLEES HPIEVEVNHAAEIDEIFDAISYRKGASVIRMLQSYLGAEVFQKSLAAYIKNHAYSNAKTEDLWA ALEAGSGEPVNKLMSSWTKQKGYPVVSAKIKDGKLELEQSRFLSSGSPGEGQWIVPVTLCCGSY EKRKNFLLESKSGAYDLKELLGCSIADGSDKINGTCSWIKINVDQAGFYRVKYDDSLAAGLRNA TESQSLTSIDRYGILDDSFALTMARQQSLASLLTLCSAYKKELDYTVLSNLIAISYKVVKIGAD ANQELMSGIKHFFIGVFQFAAGKLGWDPKQGESHLDAMLRGEVLTALAVFGHDETLKEAVRRFD AFLADRNTPLLPPDIRRAAYVAVMQRANKSDKSGYESLLRVYRETDLSQEKTRILGSLASCPDP TIVQDVLNFVLSDEALAAPKVVLFEEDEILVLEFGEILPHGVGVLKLGFNGVLNDKMKGFYRST YEHNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLEVPTDLVALSNMPIMEEKVNGNLK IVSYQESPIMSTYLVAIVVGLFDYVEDHTSDGIKVRVYCQVGKADQGKFALHVGAKTLDLFKEY FAVPYPLPKMDMIAIPDFAAGAMENYGLVTYRETALLYDEQHSAASNKQRVATVVAHELAHQWF GNLVTMEWWTHLWLNEGFATWVSYLATDSLFPEWKIWTQFLDESTEGLRLDGLEESHPIEVEVN HAAEIDEIFDAISYRKGASVIRMLQSYLGAEVFQKSLAAYIKNHAYSNAKTEDLWAALEAGSGE PVNKLMSSWTKQKGYPVVSAKIKDGKLELEQSRFLSSGSPGEGQWIVPVTLCCGSYEKRKNFLL ESKSGAYDLKELLGCSIADGSDKINGTCSWIKINVDQAGFYRVKYDDSLAAGLRNATESQSLTS IDRYGILDDSFALTMARQQSLASLLTLCSAYKKELDYTVLSNLIAISYKVVKIGADANQELMSG IKHFFIGVFQFAAGKLGWDPKQGESHLDAMLRGEVLTALAVFGHDETLKEAVRRFDAFLADRNT PLLPPDIRRAAYVAVMQRANKSDKSGYESLLRVYRETDLSQEKTRILGSLASCPDPTIVQDVLN FVLSDEALAAPKVVLFEEDEILVLEFGEILPHGVGVLKLGFNGVLNDKMKGFYRSTYEHNGEKK NMAVTQFEPADARRCFPCWDEPACKATFKITLEVPTDLVALSNMPIMEEKVNGNLKIVSYQESP IMSTYLVAIVVGLFDYVEDHTSDGIKVRVYCQVGKADQGKFALHVGAKTLDLFKEYFAVPYPLP KMDMIAIPDFAAGAMENYGLVTYRETALLYDEQHSAASNKQRVATVVAHELAHQWFGNLVTMEW WTHLWLNEGFATWVSYLATDSLFPEWKIWTQFLDESTEGLRLDGLEESHPIEVEVNHAAEIDEI FDAISYRKGASVIRMLQSYLGAEVFQKSLAAYIKNHAYSNAKTEDLWAALEAGSGEPVNKLMSS WTKQKGYPVVSAKIKDGKLELEQSRFLSSGSPGEGQWIVPVTLCCGSYEKRKNFLLESKSGAYD LKELLGCSIADGSDKINGTCSWIKINVDQAGFYRVKYDDSLAAGLRNATESQSLTSIDRYGILD DSFALTMARQQSLASLLTLCSAYKKELDYTVLSNLIAISYKVVKIGADANQELMSGIKHFFIGV FQFAAGKLGWDPKQGESHLDAMLRGEVLTALAVFGHDETLKEAVRRFDAFLADRNTPLLPPDIR RAAYVAVMQRANKSDKSGYESLLRVYRETDLSQEKTRILGSLASCPDPTIVQDVLNFVLSDEAL AAPKVVLFEEDEILVLEFGEILPHGVGVLKLGFNGVLNDKMKGFYRSTYEHNGEKKNMAVTQFE PADARRCFPCWDEPACKATFKITLEVPTDLVALSNMPIMEEKVNGNLKIVSYQESPIMSTYLVA IVVGLFDYVEDHTSDGIKVRVYCQVGKADQGKFALHVGAKTLDLFKEYFAVPYPLPKMDMIAIP DFAAGAMENYGLVTYRETALLYDEQHSAASNKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNE GFATWVSYLATDSLFPEWKIWTQFLDESTEGLRLDGLEESHPIEVEVNHAAEIDEIFDAISYRK GASVIRMLQSYLGAEVFQKSLAAYIKNHAYSNAKTEDLWAALEAGSGEPVNKLMSSWTKQKGYP VVSAKIKDGKLELEQSRFLSSGSPGEGQWIVPVTLCCGSYEKRKNFLLESKSGAYDLKELLGCS IADGSDKINGTCSWIKINVDQAGFYRVKYDDSLAAGLRNATESQSLTSIDRYGILDDSFALTMA RQQSLASLLTLCSAYKKELDYTVLSNLIAISYKVVKIGADANQELMSGIKHFFIGVFQFAAGKL GWDPKQGESHLDAMLRGEVLTALAVFGHDETLKEAVRRFDAFLADRNTPLLPPDIRRAAYVAVM QRANKSDKSGYESLLRVYRETDLSQEKTRILGSLASCPDPTIVQDVLNFVLSDE(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017;Chen et al., 2017a

circRNA

Detail information of AT4G33090_circ_g.1

Address

Any questions?

Supported by