Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Zm00001d039061_circ_g.2 |
ID in PlantcircBase | zma_circ_009181 |
Alias | Zm06circ00106, GRMZM2G092475_C1 |
Organism | Zea mays |
Position | chr6: 169437027-169440110 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | CIRI2 |
Parent gene | Zm00001d039061 |
Parent gene annotation |
Probable sodium/metabolite cotransporter BASS4 chloroplastic |
Parent gene strand | + |
Alternative splicing | Zm00001d039061_circ_g.1 |
Support reads | NA |
Tissues | leaf, endosperm |
Exon boundary | Yes-No |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d039061_T001:5 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.100990167 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Han et al., 2020;Zhang et al., 2019 |