Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Zm00001d048434_circ_g.1 |
ID in PlantcircBase | zma_circ_010107 |
Alias | zma_circ_0003137 |
Organism | Zea mays |
Position | chr9: 156304499-156308504 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d048434 |
Parent gene annotation |
Type IV inositol polyphosphate 5-phosphatase 7 |
Parent gene strand | - |
Alternative splicing | Zm00001d048434_circ_g.2 |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | Yes-No |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d048434_T018:2 Zm00001d048434_T010:2 Zm00001d048434_T002:2 Zm00001d048434_T007:3 Zm00001d048434_T020:2 Zm00001d048434_T014:1 Zm00001d048434_T003:2 Zm00001d048434_T016:2 Zm00001d048434_T023:1 Zm00001d048434_T004:3 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.370891913 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Ma et al., 2021b |