Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G15240_circ_g.5 |
ID in PlantcircBase | ath_circ_002660 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 5246322-5246468 JBrowse» |
Reference genome | TAIR10.38 |
Type | ei-circRNA |
Identification method | PcircRNA_finder |
Parent gene | AT1G15240 |
Parent gene annotation |
Phox (PX) domain-containing protein |
Parent gene strand | + |
Alternative splicing | AT1G15240_circ_g.3 AT1G15240_circ_g.4 AT1G15240_circ_g.6 |
Support reads | 1 |
Tissues | leaf |
Exon boundary | No-Yes |
Splicing signals | GT-TC |
Number of exons covered | AT1G15240.2:1 AT1G15240.3:1 AT1G15240.4:1 AT1G15240.5:1 AT1G15240.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.231295463 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |