Plant Circular RNA Database

Detail information of orai.005G196700_circ_g.2

			
						 General Information
					
						CircRNA Name
						orai.005G196700_circ_g.2
					
						ID in PlantcircBase
						gra_circ_000517
					
						Alias
						Chr05:57032789|57037760
					
						Organism
						
							Gossypium raimondii						
					
						Position
						
							chrChr05: 57032789-57037760  JBrowse»						
					
						Reference genome
						
							Graimondii_221						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Gorai.005G196700						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							orai.005G196700_circ_g.1 orai.005G196700_circ_g.3 						
					
						Support reads
						2
					
						Tissues
						ovule
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Gorai.005G196700.5:15
Gorai.005G196700.1:16
Gorai.005G196700.4:16
Gorai.005G196700.3:16
Gorai.005G196700.2:16

General Information
CircRNA Name	orai.005G196700_circ_g.2
ID in PlantcircBase	gra_circ_000517
Alias	Chr05:57032789\|57037760
Organism	Gossypium raimondii
Position	chrChr05: 57032789-57037760 JBrowse»
Reference genome	Graimondii_221
Type	ue-circRNA
Identification method	CIRI
Parent gene	Gorai.005G196700
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	orai.005G196700_circ_g.1 orai.005G196700_circ_g.3
Support reads	2
Tissues	ovule
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Gorai.005G196700.5:15 Gorai.005G196700.1:16 Gorai.005G196700.4:16 Gorai.005G196700.3:16 Gorai.005G196700.2:16

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TACATTAGAAGATATAGACGTACGTGTATTTTCGGCATCCTTTGAAAAACCTTAAGCTTCTCTC
ACGTAACAACTCGGCGCTTTCCTCCATGCATTGTATctttgcatgaatgaacttctcctttaca
gatatagaatcagaatgacaaggttttcccataagcagcagctgcggtttatcagacttggaaa
agcttcat

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTTTGCATGAATGAACTTCTCCTTTACAGATATAGAATCAGAATGACAAGGTTTTCCCATAAGC
AGCAGCTGCGGTTTATCAGACTTGGAAAAGCTTCATCACCAATAATAAGCATTAGCAACACATA
GCTAGAGAACTAAGTTGGTTTTTATTATTACTACAAATACTGTATTTTAATCATAAGAAAAAAA
GATTCTTTACCTTGGAGTAAGATCAACGTGGAAAGCATTTCTGGAGTGCAACAATTCCTCCCAA
ACTGAGTTAGCAAAGGTATTGCCCAGAGATTGAAACAAACTTATAACAGATGGGTCCCACACTT
TTACATCAAGAGTAAGCGACCTAACCTGAAATATGAACCAACAAAAACATAAGAGCTACACAAA
GGACAAAGCAACATCACTAAAGATTACTCAGGATGCTTTTATCCAGCTAAAAGAATTCACTATA
GCAAGAAAACAGTATACTGCATAGAAACCAAAAAAATACAAATTCCAACAAGAGACTAATTATC
CTCTTTATTATCAAATTCCTGTAATCCAATCAATAGCAGAAATAACTTTTCATTCTGTTTGTAT
TACCATGTTCATTACTGAGAACCATTCATCTTTAGAAATAAGAAAATTCAAGAAAAAGAGCAAT
TGATCAATAAAATACTTCTCTAGAGAGACGCAGGTTCTCATATGGATGAATAAAAATGTTGTAT
ATAATCTATTCACTTCACCTTTGATATATGAACACCAAGATTACGGTGAACACCAGAACACTCG
ATACAAAGAAGAACACCCAGATTCAAAGATGCCCAATCAGGTTCAGGAGCACCACAATCTGCAC
ATTTGTCATTCCCACATACTCTTCGCAGTACATCAATTGGCTTTTCATTTTTTAGACAGGACCT
TTGATGTTGTGAGGCTCTTGATTGGCGTTCGTTATGTGCACTAACAAGGTTTCTCTCAGAGGCA
TACTCTTCAACACCAGTGTGATCAAAATCAGAACTTTCAAATGAACTACTCTCACTGGCAGATC
GATGATGACCACTTCCCATGGGACTAGCAGAGAGACACTGAAAATTTATAAGAATTCAACAGTC
AATAAGTTGATAAGGAAGCAACGAGAAAAAATTGTGCTACATAAATAATTACCCTTTCAGGAGC
CTGAGAACTAAGCAAAGAAGCAATAACACCAGTTATCTTTTCAATCCAATCCATTTGATCCAGT
GCACTCTCTGCCTGCTCTGACAAGCACAAAAAAAGCATTATTGCAGTCAATTTCCAAATAATAG
CCCTAATCCTACACAAGTGCAATTTGGCCTGTCAACCCAGCAATTGATTGATCCCAGAAATAAG
AGAAATGCAAAGATACAAGTTAACAGCTAATGAGAAACACAGTCTACACCTAGGTCATACCTGC
AAGGTGTAATTCTTTGTAGGAGAAATTATCCTAAAACAAAACCTCAAATCTGACTGGTCGGCAT
CAACTTTAATTGTTGACGTAAGCAGATTCACTGTGTGATGGGCAACAGATTTTTCATCATGAAC
GCCACCATGATAATGAGAAGAAAGCCATCGGCCCAATAATCCAGATCCAAGTTCAGAGCTATTT
CTCTGACCAGAAAGCTGACTGCCAGACCCCTACTCACCAAGAAAGATCAAGAAGAGCAGGAGAG
CTTTCATCACAAAATGCACTTCAAGCACCCTACTTTATATTTTTCAAAAAAGCAGGAGAGGAGG
AAGAATCTTACAGATGATTTGCTGCACTGCTTGCGGTAATAATACAACATTCCACGGCTATCAA
GGACAAAAAATCTTCTTTTCCAGTCTCCTCTCAAGCTTGATGAACGTTTTGACAGATAGCCTTG
TCGAATGGTTTGAACCTGTAGGAATATTCAGAGTTTCAGATGCAGATATACAGTACATAGATGC
AAAAGCATCAGAGGACTAATAAAATCTAACAAACAGAAATCTGGGATAACTTAAAATCTTCTTT
AAACCTTTCCCTTCGCAGCAGACTGCATTACTGCCTCTATCATTTTATGTGAACTTCTACCTAT
TGCTTGTATACCATCTCCATTAGGAGATCCATTAGAACCATTAGAAGACAATCTGCTCTCTCTG
TCAACCTGCCGTTTGTACTCTTGCATTCTTTCATTTAAAGCTGCCTGGTCATATTTGGATCTTT
CCCTTGATTGCCGTGCATAGGTCATGACCTGCAGGACTTGTATTTCAACAATTAGCACATATAT
AGGCATAGACATAGCAATCATCAATGACAAGATACAAATTTTATTTTTGCTTTGGTTAGATTCA
AAAGCATACCAACTATTAACCATGCATCTTATAACATGCTATGACTAATCTCTCAAATAACTGA
TACCATATTCAGTATAGGGATAATATTTTTCTTTTTCCTTTGAGTAAAACAATTGGATGAAGAA
AATACAGCTCAAGCAGATATGTATAGAATTATGTTTTGGTCTGGAGGAAATTTAAGATAACAAA
CCTGATTAATATATGGCTCCATTTGATGCAATAATTCATAGCCCTATAAACAGAAAAACTTCAT
CATGACCAATGCATTCACCATGTGATAGAAACAATGTGAAAGAAATTGAGAAGTCCTGCGACAA
GATAACCTGTTTGAAGTATCGAAGATGTGCATCCATAGTCCCACTAACAGCTTCCAGAAACTCA
AATCGCTTTTTAGCTTCAACATTTGAAAGAGCAGTTACCTGTAATTGTAAAAACAATAGCGTAA
TCACATATATTGAACCACATTCGAATTGTCACAGCAACATCAGTTCAGAAATCATCTGCTAGCA
ATTCACTCACTAGATTAAAGCGAGCCTGCTCAAATGTTGACCTCGCATTATGAAGTTCCTAGAA
TAACTCCAACCGTGTCAGAGTATGTAGGAAATATTCATCAACATGAAATCTATGTAGGAAAGAA
TGTCATGTACATGAAATTATAAACCATCAAGCCATTTTGCAAGATACCTCTTCCAAAACATTGG
CAATATTACTCTTTGTGCTTTTCCTGAGTGAAAGAAACTTTTCACGAGCCTGCAAGATTATTCA
AACCGGTACAATATAACTATAAATTTGATTGTATGCCAGCTCAAGACTATAATATCATATTCAA
GCAACGTAACTAAGCAAGAAAACAAACTACAGTGGAAAAATGAATTTAACTTCTGAAGCACCTG
GTCATAAACGAGACTAGCCTTATCAAAGCGTTTACGTGCTTCCTGCACTCAGATAAGTTCTTTT
AAAACAATAGGCTAGACAAATAAAACAGATAAAACTAAAAAAAATACACAGATTATTAAAAGGT
CAATGAATCCATAGCAGAGCAATAAATAAACAACCTATGTTTCTCTTAAGAAGACTAATTTACA
TAGCAATAGTTGATAAGGTTGCCCAGCTTTTAGCTAGTTCCAAATCTTCCCTACTTTGTAGGGC
AACTTAAATCTCATTTGCAATAAAGGCGGTTACCTTGACGTCAAGTAAATCCCTATTGACAAAC
TGCATTAATTTTTCATTTAGCTCGGTTTCAACCTGGAGAGAAAAGAAAGTAGTTCAGAAATAAT
ATTATCGTATGCCAATATAGTTGTAACATTTGCATTCTCAAAATGTTTAAAAGAAATATTTAAA
TGTTGACATCAGGACAGGTTTTAAAGATTTAATGCATTAAAGTCTTAAATAGACATGAAGAAAA
CAAGCAAAGTTATAACTTTAATGCATTAAAGTCTTAGGTCTTCACTGCTCCATAATAAATTTGA
TATTCATGCTCAAACAATATTTCAGAAATTTACCTGTGACCGAAGAACTTCCTTGTATGTTCCA
ATTTCTCTCAATGCTATGGTAAACTTGGTCATAACTGGTCCTAAAGAGGGGAAAAAAGGTTCAA
TTACTGCTATGGTGCCATACCAAAACATAATATACACAACATGTCAGATACGGGAAAATTTTTG
AGAAAGCAAAAAGTAAGAAAAGGCATTTGGATGTCTTATAGAGATCAAACAAACAATTATTACA
ATAGGAAGAACACCAAAGCAAAAATAATGAAGCCACTGAAACTTAAGACCGCCTGATCTCTTCA
GGTGCAAATCTATCACCAATATTCAAGCAAGTAGAATAAACAACTTTGGCACAAAATTAGAACA
AATACATACCACCAAAAGCAACGCTAATAGGGTCATTATGTCCTCCACCAAACATTTCAAGGGC
ACTTGCAAAAGCAATGTCCCCATCATATCCCTCGCCAAGTCCTTCACTGCAATCAAAGAAAAAT
AATATGCAAATAAATATTTCCCCAACTCATGGCCCCAATAGCAGGCGGTAGCAACCCCCTCCCA
CTTAAGAGGAAGAAACCAAAAAAGGAAAGAAAAAGTCTATTCCAGTTGAGAGCTACAATTATAT
GACTGCTTTTACAGTGATAGTCAGGAAATTTACGAGTACCAGTATCCTGGTGTAAAACCACAAG
CATGGAACCATGGTCAAGTACCAAAGAAAAGTAACTAACGGATACATAATTATTGAAGTTTTTG
TGTTATAATGCAAGGTTGCATTCAGTTTTTTTGTCATATGTTTGACCTACAGGTAAGAAAGAAT
GTTGAAAAACATAAGAAACTTCCATAAACTGGCAGAAAGTCGAGAACAAATATGGGCAATGACT
ACTAATACATGGTAACAGAAACCCTTTATGTTCGAGAGGCATAAAGCAACAAACAACAAATACT
TTGCCCATTATAAAGACATATCGGACTATTTCTTTATTTAATTTAGAATTCAAGTTTGGCCATG
TCACATTCTCATACACTTCTTTCATTCACTAAAAAGGGAACTTGTTTTGATTAAAACAATCAGA
TTCATAGATACATTAGAAGATATAGACGTACGTGTATTTTCGGCATCCTTTGAAAAACCTTAAG
CTTCTCTCACGTAACAACTCGGCGCTTTCCTCCATGCATTGTAT
						
					

			
		

Sequences
Splice junction sequence	TACATTAGAAGATATAGACGTACGTGTATTTTCGGCATCCTTTGAAAAACCTTAAGCTTCTCTC ACGTAACAACTCGGCGCTTTCCTCCATGCATTGTATctttgcatgaatgaacttctcctttaca gatatagaatcagaatgacaaggttttcccataagcagcagctgcggtttatcagacttggaaa agcttcat
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTTTGCATGAATGAACTTCTCCTTTACAGATATAGAATCAGAATGACAAGGTTTTCCCATAAGC AGCAGCTGCGGTTTATCAGACTTGGAAAAGCTTCATCACCAATAATAAGCATTAGCAACACATA GCTAGAGAACTAAGTTGGTTTTTATTATTACTACAAATACTGTATTTTAATCATAAGAAAAAAA GATTCTTTACCTTGGAGTAAGATCAACGTGGAAAGCATTTCTGGAGTGCAACAATTCCTCCCAA ACTGAGTTAGCAAAGGTATTGCCCAGAGATTGAAACAAACTTATAACAGATGGGTCCCACACTT TTACATCAAGAGTAAGCGACCTAACCTGAAATATGAACCAACAAAAACATAAGAGCTACACAAA GGACAAAGCAACATCACTAAAGATTACTCAGGATGCTTTTATCCAGCTAAAAGAATTCACTATA GCAAGAAAACAGTATACTGCATAGAAACCAAAAAAATACAAATTCCAACAAGAGACTAATTATC CTCTTTATTATCAAATTCCTGTAATCCAATCAATAGCAGAAATAACTTTTCATTCTGTTTGTAT TACCATGTTCATTACTGAGAACCATTCATCTTTAGAAATAAGAAAATTCAAGAAAAAGAGCAAT TGATCAATAAAATACTTCTCTAGAGAGACGCAGGTTCTCATATGGATGAATAAAAATGTTGTAT ATAATCTATTCACTTCACCTTTGATATATGAACACCAAGATTACGGTGAACACCAGAACACTCG ATACAAAGAAGAACACCCAGATTCAAAGATGCCCAATCAGGTTCAGGAGCACCACAATCTGCAC ATTTGTCATTCCCACATACTCTTCGCAGTACATCAATTGGCTTTTCATTTTTTAGACAGGACCT TTGATGTTGTGAGGCTCTTGATTGGCGTTCGTTATGTGCACTAACAAGGTTTCTCTCAGAGGCA TACTCTTCAACACCAGTGTGATCAAAATCAGAACTTTCAAATGAACTACTCTCACTGGCAGATC GATGATGACCACTTCCCATGGGACTAGCAGAGAGACACTGAAAATTTATAAGAATTCAACAGTC AATAAGTTGATAAGGAAGCAACGAGAAAAAATTGTGCTACATAAATAATTACCCTTTCAGGAGC CTGAGAACTAAGCAAAGAAGCAATAACACCAGTTATCTTTTCAATCCAATCCATTTGATCCAGT GCACTCTCTGCCTGCTCTGACAAGCACAAAAAAAGCATTATTGCAGTCAATTTCCAAATAATAG CCCTAATCCTACACAAGTGCAATTTGGCCTGTCAACCCAGCAATTGATTGATCCCAGAAATAAG AGAAATGCAAAGATACAAGTTAACAGCTAATGAGAAACACAGTCTACACCTAGGTCATACCTGC AAGGTGTAATTCTTTGTAGGAGAAATTATCCTAAAACAAAACCTCAAATCTGACTGGTCGGCAT CAACTTTAATTGTTGACGTAAGCAGATTCACTGTGTGATGGGCAACAGATTTTTCATCATGAAC GCCACCATGATAATGAGAAGAAAGCCATCGGCCCAATAATCCAGATCCAAGTTCAGAGCTATTT CTCTGACCAGAAAGCTGACTGCCAGACCCCTACTCACCAAGAAAGATCAAGAAGAGCAGGAGAG CTTTCATCACAAAATGCACTTCAAGCACCCTACTTTATATTTTTCAAAAAAGCAGGAGAGGAGG AAGAATCTTACAGATGATTTGCTGCACTGCTTGCGGTAATAATACAACATTCCACGGCTATCAA GGACAAAAAATCTTCTTTTCCAGTCTCCTCTCAAGCTTGATGAACGTTTTGACAGATAGCCTTG TCGAATGGTTTGAACCTGTAGGAATATTCAGAGTTTCAGATGCAGATATACAGTACATAGATGC AAAAGCATCAGAGGACTAATAAAATCTAACAAACAGAAATCTGGGATAACTTAAAATCTTCTTT AAACCTTTCCCTTCGCAGCAGACTGCATTACTGCCTCTATCATTTTATGTGAACTTCTACCTAT TGCTTGTATACCATCTCCATTAGGAGATCCATTAGAACCATTAGAAGACAATCTGCTCTCTCTG TCAACCTGCCGTTTGTACTCTTGCATTCTTTCATTTAAAGCTGCCTGGTCATATTTGGATCTTT CCCTTGATTGCCGTGCATAGGTCATGACCTGCAGGACTTGTATTTCAACAATTAGCACATATAT AGGCATAGACATAGCAATCATCAATGACAAGATACAAATTTTATTTTTGCTTTGGTTAGATTCA AAAGCATACCAACTATTAACCATGCATCTTATAACATGCTATGACTAATCTCTCAAATAACTGA TACCATATTCAGTATAGGGATAATATTTTTCTTTTTCCTTTGAGTAAAACAATTGGATGAAGAA AATACAGCTCAAGCAGATATGTATAGAATTATGTTTTGGTCTGGAGGAAATTTAAGATAACAAA CCTGATTAATATATGGCTCCATTTGATGCAATAATTCATAGCCCTATAAACAGAAAAACTTCAT CATGACCAATGCATTCACCATGTGATAGAAACAATGTGAAAGAAATTGAGAAGTCCTGCGACAA GATAACCTGTTTGAAGTATCGAAGATGTGCATCCATAGTCCCACTAACAGCTTCCAGAAACTCA AATCGCTTTTTAGCTTCAACATTTGAAAGAGCAGTTACCTGTAATTGTAAAAACAATAGCGTAA TCACATATATTGAACCACATTCGAATTGTCACAGCAACATCAGTTCAGAAATCATCTGCTAGCA ATTCACTCACTAGATTAAAGCGAGCCTGCTCAAATGTTGACCTCGCATTATGAAGTTCCTAGAA TAACTCCAACCGTGTCAGAGTATGTAGGAAATATTCATCAACATGAAATCTATGTAGGAAAGAA TGTCATGTACATGAAATTATAAACCATCAAGCCATTTTGCAAGATACCTCTTCCAAAACATTGG CAATATTACTCTTTGTGCTTTTCCTGAGTGAAAGAAACTTTTCACGAGCCTGCAAGATTATTCA AACCGGTACAATATAACTATAAATTTGATTGTATGCCAGCTCAAGACTATAATATCATATTCAA GCAACGTAACTAAGCAAGAAAACAAACTACAGTGGAAAAATGAATTTAACTTCTGAAGCACCTG GTCATAAACGAGACTAGCCTTATCAAAGCGTTTACGTGCTTCCTGCACTCAGATAAGTTCTTTT AAAACAATAGGCTAGACAAATAAAACAGATAAAACTAAAAAAAATACACAGATTATTAAAAGGT CAATGAATCCATAGCAGAGCAATAAATAAACAACCTATGTTTCTCTTAAGAAGACTAATTTACA TAGCAATAGTTGATAAGGTTGCCCAGCTTTTAGCTAGTTCCAAATCTTCCCTACTTTGTAGGGC AACTTAAATCTCATTTGCAATAAAGGCGGTTACCTTGACGTCAAGTAAATCCCTATTGACAAAC TGCATTAATTTTTCATTTAGCTCGGTTTCAACCTGGAGAGAAAAGAAAGTAGTTCAGAAATAAT ATTATCGTATGCCAATATAGTTGTAACATTTGCATTCTCAAAATGTTTAAAAGAAATATTTAAA TGTTGACATCAGGACAGGTTTTAAAGATTTAATGCATTAAAGTCTTAAATAGACATGAAGAAAA CAAGCAAAGTTATAACTTTAATGCATTAAAGTCTTAGGTCTTCACTGCTCCATAATAAATTTGA TATTCATGCTCAAACAATATTTCAGAAATTTACCTGTGACCGAAGAACTTCCTTGTATGTTCCA ATTTCTCTCAATGCTATGGTAAACTTGGTCATAACTGGTCCTAAAGAGGGGAAAAAAGGTTCAA TTACTGCTATGGTGCCATACCAAAACATAATATACACAACATGTCAGATACGGGAAAATTTTTG AGAAAGCAAAAAGTAAGAAAAGGCATTTGGATGTCTTATAGAGATCAAACAAACAATTATTACA ATAGGAAGAACACCAAAGCAAAAATAATGAAGCCACTGAAACTTAAGACCGCCTGATCTCTTCA GGTGCAAATCTATCACCAATATTCAAGCAAGTAGAATAAACAACTTTGGCACAAAATTAGAACA AATACATACCACCAAAAGCAACGCTAATAGGGTCATTATGTCCTCCACCAAACATTTCAAGGGC ACTTGCAAAAGCAATGTCCCCATCATATCCCTCGCCAAGTCCTTCACTGCAATCAAAGAAAAAT AATATGCAAATAAATATTTCCCCAACTCATGGCCCCAATAGCAGGCGGTAGCAACCCCCTCCCA CTTAAGAGGAAGAAACCAAAAAAGGAAAGAAAAAGTCTATTCCAGTTGAGAGCTACAATTATAT GACTGCTTTTACAGTGATAGTCAGGAAATTTACGAGTACCAGTATCCTGGTGTAAAACCACAAG CATGGAACCATGGTCAAGTACCAAAGAAAAGTAACTAACGGATACATAATTATTGAAGTTTTTG TGTTATAATGCAAGGTTGCATTCAGTTTTTTTGTCATATGTTTGACCTACAGGTAAGAAAGAAT GTTGAAAAACATAAGAAACTTCCATAAACTGGCAGAAAGTCGAGAACAAATATGGGCAATGACT ACTAATACATGGTAACAGAAACCCTTTATGTTCGAGAGGCATAAAGCAACAAACAACAAATACT TTGCCCATTATAAAGACATATCGGACTATTTCTTTATTTAATTTAGAATTCAAGTTTGGCCATG TCACATTCTCATACACTTCTTTCATTCACTAAAAAGGGAACTTGTTTTGATTAAAACAATCAGA TTCATAGATACATTAGAAGATATAGACGTACGTGTATTTTCGGCATCCTTTGAAAAACCTTAAG CTTCTCTCACGTAACAACTCGGCGCTTTCCTCCATGCATTGTAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.121779281

Conservation Information
Conserved circRNAs	NA
PMCS	0.121779281

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							57032849-57032989(-)
57036644-57032795(+)
						
						Potential amino acid sequence
						
							MGKPCHSDSISVKEKFIHAKIQCMEESAELLRERSLRFFKGCRKYTEGLGEGYDGDIAFASALE
MFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVETELNEKLMQFVNRDLLDVKEARK
RFDKASLVYDQAREKFLSLRKSTKSNIANVLEEELHNARSTFEQARFNLVTALSNVEAKKRFEF
LEAVSGTMDAHLRYFKQGYELLHQMEPYINQVMTYARQSRERSKYDQAALNERMQEYKRQVDRE
SRLSSNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSSLRGDWKRRFF
VLDSRGMLYYYRKQCSKSSGSGSQLSGQRNSSELGSGLLGRWLSSHYHGGVHDEKSVAHHTVNL
LTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQAPERCLSAS
PMGSGHHRSASESSSFESSDFDHTGVEEYASERNLVSAHNERQSRASQHQRSCLKNEKPIDVLR
RVCGNDKCADCGAPEPDWASLNLGVLLCIECSGVHRNLGVHISKVRSLTLDVKVWDPSVISLFQ
SLGNTFANSVWEELLHSRNAFHVDLTPR*(-)
MVNLVITGPPKATLIGSLCPPPNISRALAKAMSPSYPSPSPSVYFRHPLKNLKLLSRNNSALSS
MHCIFA*(+)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	57032849-57032989(-) 57036644-57032795(+)
Potential amino acid sequence	MGKPCHSDSISVKEKFIHAKIQCMEESAELLRERSLRFFKGCRKYTEGLGEGYDGDIAFASALE MFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVETELNEKLMQFVNRDLLDVKEARK RFDKASLVYDQAREKFLSLRKSTKSNIANVLEEELHNARSTFEQARFNLVTALSNVEAKKRFEF LEAVSGTMDAHLRYFKQGYELLHQMEPYINQVMTYARQSRERSKYDQAALNERMQEYKRQVDRE SRLSSNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSSLRGDWKRRFF VLDSRGMLYYYRKQCSKSSGSGSQLSGQRNSSELGSGLLGRWLSSHYHGGVHDEKSVAHHTVNL LTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQAPERCLSAS PMGSGHHRSASESSSFESSDFDHTGVEEYASERNLVSAHNERQSRASQHQRSCLKNEKPIDVLR RVCGNDKCADCGAPEPDWASLNLGVLLCIECSGVHRNLGVHISKVRSLTLDVKVWDPSVISLFQ SLGNTFANSVWEELLHSRNAFHVDLTPR(-) MVNLVITGPPKATLIGSLCPPPNISRALAKAMSPSYPSPSPSVYFRHPLKNLKLLSRNNSALSS MHCIFA(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhao et al., 2017b

circRNA

Detail information of orai.005G196700_circ_g.2

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