Plant Circular RNA Database

Detail information of 4_circ_igg.9

			
						 General Information
					
						CircRNA Name
						4_circ_igg.9
					
						ID in PlantcircBase
						ath_circ_030732
					
						Alias
						At_ciR330, Ath_circ_FC0056, AtciR101
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr4: 7887111-7887618  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							igg-circRNA							
									
						Identification method
						CIRI-full, circRNA_finder, circseq_cup, find_circ, CIRI2
					
						Parent gene
						
							NA						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						NA
					
						Alternative splicing
						
							4_circ_igg.8 4_circ_igg.10 						
					
						Support reads
						17/5
					
						Tissues
						leaf/leaf, aerial, whole_plant
					
						Exon boundary  
						
							No-No							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						NA

General Information
CircRNA Name	4_circ_igg.9
ID in PlantcircBase	ath_circ_030732
Alias	At_ciR330, Ath_circ_FC0056, AtciR101
Organism	Arabidpsis thaliana
Position	chr4: 7887111-7887618 JBrowse»
Reference genome	TAIR10.38
Type	igg-circRNA
Identification method	CIRI-full, circRNA_finder, circseq_cup, find_circ, CIRI2
Parent gene	NA
Parent gene annotation	NA
Parent gene strand	NA
Alternative splicing	4_circ_igg.8 4_circ_igg.10
Support reads	17/5
Tissues	leaf/leaf, aerial, whole_plant
Exon boundary	No-No "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	NA

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTTTGGGCGG
CTGTGTTCTTGTCTTGCTATGCTACGATATATATATcgtaccgttgacacaaagcatccgtgca
tcatttctgtcactttttccgacaaagcacgtatattctgtctactttcatcacagatctacgc
agtaatta

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 193
Transcript exons: ,7887116-7887140,7887452-7887618
CGTTGACACAAAGCATCCGTGCATCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACA
CTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGA
TCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT
Transcript length: 195
Transcript exons: 7887111-7887177,7887491-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTCTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCAT
GGATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATA
TAT
Transcript length: 206
Transcript exons: 7887111-7887188,7887491-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCTACTTTCACTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCA
TCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGC
TACGATATATATAT
Transcript length: 214
Transcript exons: 7887111-7887158,7887453-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCTCCCGTACTGCTACAA
AAGCAAATCTAACGTTGACACACTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATT
CTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCT
TGCTATGCTACGATATATATAT
Transcript length: 215
Transcript exons: 7887111-7887190,7887484-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCTACTTTCATCTGACACACTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGAT
TCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTC
TTGCTATGCTACGATATATATAT
Transcript length: 216
Transcript exons: 7887111-7887158,7887451-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCCTTCCCGTACTGCTAC
AAAAGCAAATCTAACGTTGACACACTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGA
TTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGT
CTTGCTATGCTACGATATATATAT
Transcript length: 230
Transcript exons: 7887111-7887176,7887455-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACACCGAGAGCTATATC
TTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTTTGGGC
GGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT
Transcript length: 235
Transcript exons: 7887111-7887180,7887454-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACACCGAGAGCT
ATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTT
TGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT
Transcript length: 237
Transcript exons: 7887111-7887179,7887451-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACACCGAGAG
CTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTC
TTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT
Transcript length: 237
Transcript exons: 7887111-7887188,7887460-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCTACTTTCACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACACCGAGAG
CTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTC
TTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT
Transcript length: 241
Transcript exons: 7887111-7887179,7887447-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACACCG
AGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTG
GTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT
Transcript length: 241
Transcript exons: 7887111-7887180,7887448-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACACCG
AGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTG
GTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT
Transcript length: 244
Transcript exons: 7887111-7887193,7887458-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCTACTTTCATCACATACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACA
CCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTT
TTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT
Transcript length: 245
Transcript exons: 7887111-7887190,7887454-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCTACTTTCATCCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTAC
ACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTT
TTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT
Transcript length: 246
Transcript exons: 7887111-7887184,7887447-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCTACTCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTA
CACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGT
TTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT
Transcript length: 249
Transcript exons: 7887111-7887184,7887444-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCTACTATTCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGA
TTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGA
AGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT
Transcript length: 250
Transcript exons: 7887111-7887195,7887454-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCTACTTTCATCACAGACCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCG
ATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAG
AAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT
Transcript length: 251
Transcript exons: 7887111-7887194,7887452-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCTACTTTCATCACAGTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCC
GATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGA
GAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT
Transcript length: 253
Transcript exons: 7887111-7887190,7887446-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCTACTTTCATCTCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTG
CCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCA
GAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT
Transcript length: 254
Transcript exons: 7887111-7887192,7887447-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCTACTTTCATCACCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACT
GCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATC
AGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT
Transcript length: 257
Transcript exons: 7887111-7887194,7887446-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCTACTTTCATCACAGTCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACAC
ACTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGG
ATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATA
T
Transcript length: 258
Transcript exons: 7887111-7887197,7887448-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCTACTTTCATCACAGATCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACA
CACTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATG
GATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATAT
AT
Transcript length: 320
Transcript exons: 7887111-7887265,7887454-7887618
CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCTACTTTCATCACAGATCTACGCAGTAATTAACAAAATATCTATTAAGAATCAAAAACA
CATAGAAAAAGAGAATAAAAACCAACTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACA
CTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGA
TCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT
Transcript length: 1670
Transcript exons: 7887111-7887618
ATGGATTCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACAC
CGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTT
TGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATATCGTACCGTTGACA
CAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATATTCTGTCTACTTTC
ATCACAGATCATATCGACAGTGTAATCCATTGGAGAATTCTTTCAGTTTTTCTTTGCTTGCTTG
GTCTTAATCCTGAAATGGATTCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACAC
ACTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGG
ATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATA
TCGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATA
TTCTGTCTACTTTCATCACAGATCATATCGACAGTGTAATCCATTGGAGAATTCTTTCAGTTTT
TCTTTGCTTGCTTGGTCTTAATCCTGAAATGGATTCCTTCTTCCCGTACTGCTACAAAAGCAAA
TCTAACGTTGACACACTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTC
ATCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATG
CTACGATATATATATCGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCG
ACAAAGCACGTATATTCTGTCTACTTTCATCACAGATCATATCGACAGTGTAATCCATTGGAGA
ATTCTTTCAGTTTTTCTTTGCTTGCTTGGTCTTAATCCTGAAATGGATTCCTTCTTCCCGTACT
GCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACACCGAGAGCTATATCTTCTCGCCT
TTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTT
CTTGTCTTGCTATGCTACGATATATATATCGTACCGTTGACACAAAGCATCCGTGCATCATTTC
TGTCACTTTTTCCGACAAAGCACGTATATTCTGTCTACTTTCATCACAGATCATATCGACAGTG
TAATCCATTGGAGAATTCTTGCAGTTTTTCTTTGCTTGCTTGGTCTTAATCCTGAAATGGATTC
CTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACACCGAGAGCT
ATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTT
TGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATATCGTACCGTTGACACAAAGCAT
CCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATATTCTGTCTACTTTCATCACAGA
TCATATCGACAGTGTAATCCATTGGAGAATTCTTTCAGTTTTTCTTTGCTTGCTTGGTCTTAAT
CCTGAA
						
					

						Genomic sequence
						
							CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT
TCTGTCTACTTTCATCACAGATCTACGCAGTAATTAACAAAATATCTATTAAGAATCAAAAACA
CATAGAAAAAGAGAATAAAAACCAACTGATTAGATCTAAATCTGTATCGTTTTCGCTAACCATA
TCGACAGTGTAATCCATTGGAGAATTCTTTCAGTTTTTCTTTGCTTGCTTGGTCTTAATCCTAA
ATCAATAAAAGTTAAATAGTTTAAGACAAGTATATCTGAAATTTGATCGAATATTTTATATTGC
TTGCCTGAAATGGATTCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGC
CGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAG
AGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT
						
					

			
		

Sequences
Splice junction sequence	CTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTTTGGGCGG CTGTGTTCTTGTCTTGCTATGCTACGATATATATATcgtaccgttgacacaaagcatccgtgca tcatttctgtcactttttccgacaaagcacgtatattctgtctactttcatcacagatctacgc agtaatta
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 193 Transcript exons: ,7887116-7887140,7887452-7887618 CGTTGACACAAAGCATCCGTGCATCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACA CTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGA TCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT Transcript length: 195 Transcript exons: 7887111-7887177,7887491-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTCTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCAT GGATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATA TAT Transcript length: 206 Transcript exons: 7887111-7887188,7887491-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCTACTTTCACTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCA TCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGC TACGATATATATAT Transcript length: 214 Transcript exons: 7887111-7887158,7887453-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCTCCCGTACTGCTACAA AAGCAAATCTAACGTTGACACACTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATT CTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCT TGCTATGCTACGATATATATAT Transcript length: 215 Transcript exons: 7887111-7887190,7887484-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCTACTTTCATCTGACACACTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGAT TCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTC TTGCTATGCTACGATATATATAT Transcript length: 216 Transcript exons: 7887111-7887158,7887451-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCCTTCCCGTACTGCTAC AAAAGCAAATCTAACGTTGACACACTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGA TTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGT CTTGCTATGCTACGATATATATAT Transcript length: 230 Transcript exons: 7887111-7887176,7887455-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACACCGAGAGCTATATC TTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTTTGGGC GGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT Transcript length: 235 Transcript exons: 7887111-7887180,7887454-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACACCGAGAGCT ATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTT TGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT Transcript length: 237 Transcript exons: 7887111-7887179,7887451-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACACCGAGAG CTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTC TTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT Transcript length: 237 Transcript exons: 7887111-7887188,7887460-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCTACTTTCACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACACCGAGAG CTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTC TTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT Transcript length: 241 Transcript exons: 7887111-7887179,7887447-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACACCG AGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTG GTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT Transcript length: 241 Transcript exons: 7887111-7887180,7887448-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACACCG AGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTG GTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT Transcript length: 244 Transcript exons: 7887111-7887193,7887458-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCTACTTTCATCACATACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACA CCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTT TTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT Transcript length: 245 Transcript exons: 7887111-7887190,7887454-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCTACTTTCATCCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTAC ACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTT TTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT Transcript length: 246 Transcript exons: 7887111-7887184,7887447-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCTACTCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTA CACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGT TTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT Transcript length: 249 Transcript exons: 7887111-7887184,7887444-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCTACTATTCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGA TTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGA AGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT Transcript length: 250 Transcript exons: 7887111-7887195,7887454-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCTACTTTCATCACAGACCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCG ATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAG AAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT Transcript length: 251 Transcript exons: 7887111-7887194,7887452-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCTACTTTCATCACAGTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCC GATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGA GAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT Transcript length: 253 Transcript exons: 7887111-7887190,7887446-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCTACTTTCATCTCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTG CCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCA GAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT Transcript length: 254 Transcript exons: 7887111-7887192,7887447-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCTACTTTCATCACCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACT GCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATC AGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT Transcript length: 257 Transcript exons: 7887111-7887194,7887446-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCTACTTTCATCACAGTCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACAC ACTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGG ATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATA T Transcript length: 258 Transcript exons: 7887111-7887197,7887448-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCTACTTTCATCACAGATCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACA CACTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATG GATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATAT AT Transcript length: 320 Transcript exons: 7887111-7887265,7887454-7887618 CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCTACTTTCATCACAGATCTACGCAGTAATTAACAAAATATCTATTAAGAATCAAAAACA CATAGAAAAAGAGAATAAAAACCAACTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACA CTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGA TCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT Transcript length: 1670 Transcript exons: 7887111-7887618 ATGGATTCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACAC CGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTT TGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATATCGTACCGTTGACA CAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATATTCTGTCTACTTTC ATCACAGATCATATCGACAGTGTAATCCATTGGAGAATTCTTTCAGTTTTTCTTTGCTTGCTTG GTCTTAATCCTGAAATGGATTCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACAC ACTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGG ATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATA TCGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATA TTCTGTCTACTTTCATCACAGATCATATCGACAGTGTAATCCATTGGAGAATTCTTTCAGTTTT TCTTTGCTTGCTTGGTCTTAATCCTGAAATGGATTCCTTCTTCCCGTACTGCTACAAAAGCAAA TCTAACGTTGACACACTGCCGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTC ATCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATG CTACGATATATATATCGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCG ACAAAGCACGTATATTCTGTCTACTTTCATCACAGATCATATCGACAGTGTAATCCATTGGAGA ATTCTTTCAGTTTTTCTTTGCTTGCTTGGTCTTAATCCTGAAATGGATTCCTTCTTCCCGTACT GCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACACCGAGAGCTATATCTTCTCGCCT TTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTTTGGGCGGCTGTGTT CTTGTCTTGCTATGCTACGATATATATATCGTACCGTTGACACAAAGCATCCGTGCATCATTTC TGTCACTTTTTCCGACAAAGCACGTATATTCTGTCTACTTTCATCACAGATCATATCGACAGTG TAATCCATTGGAGAATTCTTGCAGTTTTTCTTTGCTTGCTTGGTCTTAATCCTGAAATGGATTC CTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGCCGATTACACCGAGAGCT ATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAGAGAAGTTTTTGGTTCTT TGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATATCGTACCGTTGACACAAAGCAT CCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATATTCTGTCTACTTTCATCACAGA TCATATCGACAGTGTAATCCATTGGAGAATTCTTTCAGTTTTTCTTTGCTTGCTTGGTCTTAAT CCTGAA
Genomic sequence	CGTACCGTTGACACAAAGCATCCGTGCATCATTTCTGTCACTTTTTCCGACAAAGCACGTATAT TCTGTCTACTTTCATCACAGATCTACGCAGTAATTAACAAAATATCTATTAAGAATCAAAAACA CATAGAAAAAGAGAATAAAAACCAACTGATTAGATCTAAATCTGTATCGTTTTCGCTAACCATA TCGACAGTGTAATCCATTGGAGAATTCTTTCAGTTTTTCTTTGCTTGCTTGGTCTTAATCCTAA ATCAATAAAAGTTAAATAGTTTAAGACAAGTATATCTGAAATTTGATCGAATATTTTATATTGC TTGCCTGAAATGGATTCCTTCTTCCCGTACTGCTACAAAAGCAAATCTAACGTTGACACACTGC CGATTACACCGAGAGCTATATCTTCTCGCCTTTGGATTCTGCTTCATCTTCAACCATGGATCAG AGAAGTTTTTGGTTCTTTGGGCGGCTGTGTTCTTGTCTTGCTATGCTACGATATATATAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.473304822

Conservation Information
Conserved circRNAs	NA
PMCS	0.473304822

			
						 Functional Information
					
						Coding potential
						N
					
						Potential coding position
						
							NA
						
						Potential amino acid sequence
						
							NA
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to methyl jasmonate

Functional Information
Coding potential	N
Potential coding position	NA
Potential amino acid sequence	NA
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to methyl jasmonate

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017;Chen et al., 2017a;Zhang et al., 2019

circRNA

Detail information of 4_circ_igg.9

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