Plant Circular RNA Database

Detail information of Zm00001d038648_circ_g.2

			
						 General Information
					
						CircRNA Name
						Zm00001d038648_circ_g.2
					
						ID in PlantcircBase
						zma_circ_009147
					
						Alias
						Zm06circ00097, zma_circ_0002302, GRMZM2G305115_C1
					
						Organism
						
							Zea mays						
					
						Position
						
							chr6: 161702932-161705987  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRI2, find_circ
					
						Parent gene
						
							Zm00001d038648						
					
						Parent gene annotation
						
							Calreticulin-3
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d038648_circ_g.1 Zm00001d038648_circ_g.3 Zm00001d038648_circ_g.4 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d038648_T003:11
Zm00001d038648_T005:11
Zm00001d038648_T002:11
Zm00001d038648_T004:6
Zm00001d038648_T001:10

General Information
CircRNA Name	Zm00001d038648_circ_g.2
ID in PlantcircBase	zma_circ_009147
Alias	Zm06circ00097, zma_circ_0002302, GRMZM2G305115_C1
Organism	Zea mays
Position	chr6: 161702932-161705987 JBrowse»
Reference genome	AGPv4.38
Type	u-circRNA
Identification method	CIRI2, find_circ
Parent gene	Zm00001d038648
Parent gene annotation	Calreticulin-3
Parent gene strand	+
Alternative splicing	Zm00001d038648_circ_g.1 Zm00001d038648_circ_g.3 Zm00001d038648_circ_g.4
Support reads	NA
Tissues	leaf, endosperm, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d038648_T003:11 Zm00001d038648_T005:11 Zm00001d038648_T002:11 Zm00001d038648_T004:6 Zm00001d038648_T001:10

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTTTCCACAGGAAGCACGGAGGGCACGGGAGGAAGGGGAGAGACGAAGGCGGGAGAGGGATAGG
GACCGCGGCAGGGACCGATACAAGGATAGATATAAGatgggtgggatagccgctgggtgaaatc
tgattggaagaagagccaaggacaagctggaaccttccgacacacagcgggaacctactctgga
gaccctga

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1121
Transcript exons: 161702932-161703039,161703446-161703638,161704150-161704
408,161704492-161704548,161704628-161704675,161704984-16
1705070,161705153-161705210,161705383-161705450,16170555
5-161705650,161705726-161705782,161705898-161705987
ATGGGTGGGATAGCCGCTGGGTGAAATCTGATTGGAAGAAGAGCCAAGGACAAGCTGGAACCTT
CCGACACACAGCGGGAACCTACTCTGGAGACCCTGACGATAAAGGTATACAAACAACTGGGGAT
GCCAAACATTTTGCTATATCAGCAAAATTCCCACAATTTAGTAACAAGGACCGGACATTGGTGA
TCCAGTACTCTCTAAAGATTGAGCAAGATATTGAATGCGGTGGTGCTTACATCAAACTTATGTC
TGGTTATCTCAACCAGAAGAAATTTGGTGGCGACACTCCTTACAGCTTCATGTTTGGGCCTGAT
ATATGTGGGGATCAGAAAAAGAAGCTCCATCTCATACTTTCATACCAAGGGCAAAACTACCCTA
TCAAGAAAGAACTAAAATGTGAAACAGACAAGTTGACACATTTTTACACATTTATTCTTAGACC
TGATGCCACTTATAGCATCCTTATCGATAACCGGGAGAGAGAATTCGGGAGCATGTACACTGAC
TGGGATATCCTTCCTCCTCGTAAGATCAAAGATGTTAATGCAAAAAAGCCAAAAGACTGGGATG
ACAGGGAATATATTGAAGATCCTGATCAAGTTAAGCCAGAGGGATATGATTCAATTCCTAAAGA
GATACCTGATCCCAAGGACAAAAAGCCTGAGTCATGGGATGACGATGACGATGGTACATGGAAG
CCTAGAATGATACCTAATCCAGAATACAAGGGACCATGGAAGCGGAAGAAAATTAAGAATCCTA
ACTACAAAGGAAAATGGAAGACCCCATGGATTGTCAATCCAGAGTTTGAGGATGACCCAGACCT
ATATGTTCTGAAACCTTTGCAGTATGTGGGGATTGAAGTATGGCAGGTCAAAGCTGGTTCAGTT
TTTGACAACATTTTGATTTGCGATGACCCAGACTATGCAAGACATGTTGTAGATGAAACTTTTG
CTGCAAATAAGGAGGCTGAAAAGGAGGCCTTTGAAGGAGCTGAAAGAAAGAGGAAGGCTAGAGA
AGAAGAGGAAGCACGGAGGGCACGGGAGGAAGGGGAGAGACGAAGGCGGGAGAGGGATAGGGAC
CGCGGCAGGGACCGATACAAGGATAGATATAAG
						
					

						Genomic sequence
						
							ATGGGTGGGATAGCCGCTGGGTGAAATCTGATTGGAAGAAGAGCCAAGGACAAGCTGGAACCTT
CCGACACACAGCGGGAACCTACTCTGGAGACCCTGACGATAAAGGTGATGGTTTATTCATGAGT
GCTATCTTATGTGCAGTAAGGGGGGCATATAGCCCTACCCTTTACTTGTTTGTTGTGTTTTACC
AAAAAAAACTGTATTTGATAGTGACAGTGGCTATTTTGATACCCAGTTTCCAACCAGATATGCC
TTGAATCTATCCATGTTAATACATCCACTAAACTTGAGCATTTTCTGAAACTTCAATCAAAGAG
CTCAGGCTGCATTCCATGTGGCCCCTGTTTTTATCATAAACATTTTATGTTAGAAAACAAGAGA
AACATTCCACGATTTGTGCATACTATATCAATCATGTTCAACTTTTAAAGCCACAAAATATATA
ACCTTATTTTCCATGGTTTATTTCATACGTCGTATGATTATTTGCATTATGGAATCATCTTTTC
AGGTATACAAACAACTGGGGATGCCAAACATTTTGCTATATCAGCAAAATTCCCACAATTTAGT
AACAAGGACCGGACATTGGTGATCCAGTACTCTCTAAAGATTGAGCAAGATATTGAATGCGGTG
GTGCTTACATCAAACTTATGTCTGGTTATCTCAACCAGAAGAAATTTGGTGGCGACACTCCTTA
CAGGTCGGTTTGCTCTCTGTGTTTGGCTAAAAAAGTTTGTTTTAATGTTCAAAAGTAACCATGA
ACTCTTCAAATGCAACTTTTCAGTCTTCACCTTAATATAGAACATTTTTTTGTAAAATCTGATA
GTAATCGTACCTTCGGATCTTGCGCATATGCCTAGAGAATTATCATTGGTAACTTGGTGTATTG
GTCATCCTTTAAGTTGATTTTATTTGTCAAGGAAAGGCAATAACTTTACCAAAAATTTATTAAC
ACACTGTGTTAGCGGTCTCACCGAGTCACACTGGGTCGTGGGTTTGAAACAGCCTCTCTGCATT
TGTGCGGGAAGCCTTGCATCTGTTTGTCCCTTCCCTAGATCCTACTCATGCGGGAGCCTCTGTC
ACTGACTCTGCCCTTTTTTACCACTGCACCAGACCTCATTGCCCTCCTATTGAACTATTAGAAA
TTATTCAGTCTGTCTTAGCTTATACTGAATATTACCTACTAAATGTCTTGATATTTGCTTATGC
AGCTTCATGTTTGGGCCTGATATATGTGGGGATCAGAAAAAGAAGCTCCATCTCATACTTTCAT
ACCAAGGGCAAAACTACCCTATCAAGAAAGAACTAAAATGTGAAACAGACAAGTTGACACATTT
TTACACATTTATTCTTAGACCTGATGCCACTTATAGCATCCTTATCGATAACCGGGAGAGAGAA
TTCGGGAGCATGTACACTGACTGGGATATCCTTCCTCCTCGTAAGATCAAAGATGTTAATGCAA
AAAAGGTTTGAGATTTTTTTGGTGTGATGAAAGCATTGTTATACAGTAATTTCAATCATGCCTT
TCATTATGCATCCGTTTCTTTCAGCCAAAAGACTGGGATGACAGGGAATATATTGAAGATCCTG
ATCAAGTTAAGCCAGAGGTATGCCTTGTTATATTTCCTGTCTTAGGACTTATCTTGATCAATAA
TTCTATTATAACCTTTTACCTGAACTGAACAGGGATATGATTCAATTCCTAAAGAGATACCTGA
TCCCAAGGACAAAAAGGTATGCATGATTCTGAGTTTGTTTAATATGCATCCAGTTCGGTTTTAA
CAATTTAATTGTCACTTTCATGCTTCAGAGCACTTACTCAGATCTCAGTATGCAAATGATAGAT
CTTCACTATTTATGTTATTAGACAAATGAGGATTGAGAAACATTCAACTTTATTCATGCATGCA
TGTTACTTTTGCTTTATTTTTTTAGCAACTTAGTCACTTTTTTCCTGGTTTGCTAGTGTGTATC
AGTAATTTCTAAACATTCATGACTAAACGAACACAAGATGACAGTATTTTTGTTTTATGCTAAA
TCAGCCTGAGTCATGGGATGACGATGACGATGGTACATGGAAGCCTAGAATGATACCTAATCCA
GAATACAAGGGACCATGGAAGCGGAAGGTTTATTTACTTTATACTAGTTATAATTTCTTAACCT
TTTGTTCATTTGAATATTTATGTACTCATGACTTTTCTCTCTCAGAAAATTAAGAATCCTAACT
ACAAAGGAAAATGGAAGACCCCATGGATTGTCAATCCAGGTGAGAGACATATATCTGATCTTCT
GCTCTTTACATATTGTCATGTAGATTATGTCTACTGTCTGTTGATGACAGTTTTGAGTATTTCT
CTTGGCAGTAAGTTTACTTCATATCTGTCTTTGAATTGAATCTTGCACGCTTGACCCAGCATTA
ACTAAACTATCTTTTGCAGAGTTTGAGGATGACCCAGACCTATATGTTCTGAAACCTTTGCAGT
ATGTGGGGATTGAAGTATGGCAGGTATCAAACATCATAACTGGGCAAAGACGTGTGCCCCATCA
CAATCTTTGGTTGTATCAAATAAATTAAACCCTATCTGAACTTACTACTACCATGGTATACAGG
TCAAAGCTGGTTCAGTTTTTGACAACATTTTGATTTGCGATGACCCAGACTATGCAAGACATGT
TGTAGATGAAACTTTTGCTGCAAATAAGGAGGTAGAGGCACGGCATGTTATGATCCATGTTGTC
CCTCCGTAGGAACCCTTGTCTCATTTTATTTCTATGCTGCAGGCTGAAAAGGAGGCCTTTGAAG
GAGCTGAAAGAAAGAGGAAGGCTAGAGAAGAAGAGGTTAATTAACATGGAATCTTACTCTCTTT
CTGCTCTGGTCGCTGTTGCCTGTTAACAATTCTGAAACTGTGAATGTGAGCCTTGGAGGAGTTA
ACAGGACGTTGCTTTTCCACAGGAAGCACGGAGGGCACGGGAGGAAGGGGAGAGACGAAGGCGG
GAGAGGGATAGGGACCGCGGCAGGGACCGATACAAGGATAGATATAAG
						
					

			
		

Sequences
Splice junction sequence	TTTTCCACAGGAAGCACGGAGGGCACGGGAGGAAGGGGAGAGACGAAGGCGGGAGAGGGATAGG GACCGCGGCAGGGACCGATACAAGGATAGATATAAGatgggtgggatagccgctgggtgaaatc tgattggaagaagagccaaggacaagctggaaccttccgacacacagcgggaacctactctgga gaccctga
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1121 Transcript exons: 161702932-161703039,161703446-161703638,161704150-161704 408,161704492-161704548,161704628-161704675,161704984-16 1705070,161705153-161705210,161705383-161705450,16170555 5-161705650,161705726-161705782,161705898-161705987 ATGGGTGGGATAGCCGCTGGGTGAAATCTGATTGGAAGAAGAGCCAAGGACAAGCTGGAACCTT CCGACACACAGCGGGAACCTACTCTGGAGACCCTGACGATAAAGGTATACAAACAACTGGGGAT GCCAAACATTTTGCTATATCAGCAAAATTCCCACAATTTAGTAACAAGGACCGGACATTGGTGA TCCAGTACTCTCTAAAGATTGAGCAAGATATTGAATGCGGTGGTGCTTACATCAAACTTATGTC TGGTTATCTCAACCAGAAGAAATTTGGTGGCGACACTCCTTACAGCTTCATGTTTGGGCCTGAT ATATGTGGGGATCAGAAAAAGAAGCTCCATCTCATACTTTCATACCAAGGGCAAAACTACCCTA TCAAGAAAGAACTAAAATGTGAAACAGACAAGTTGACACATTTTTACACATTTATTCTTAGACC TGATGCCACTTATAGCATCCTTATCGATAACCGGGAGAGAGAATTCGGGAGCATGTACACTGAC TGGGATATCCTTCCTCCTCGTAAGATCAAAGATGTTAATGCAAAAAAGCCAAAAGACTGGGATG ACAGGGAATATATTGAAGATCCTGATCAAGTTAAGCCAGAGGGATATGATTCAATTCCTAAAGA GATACCTGATCCCAAGGACAAAAAGCCTGAGTCATGGGATGACGATGACGATGGTACATGGAAG CCTAGAATGATACCTAATCCAGAATACAAGGGACCATGGAAGCGGAAGAAAATTAAGAATCCTA ACTACAAAGGAAAATGGAAGACCCCATGGATTGTCAATCCAGAGTTTGAGGATGACCCAGACCT ATATGTTCTGAAACCTTTGCAGTATGTGGGGATTGAAGTATGGCAGGTCAAAGCTGGTTCAGTT TTTGACAACATTTTGATTTGCGATGACCCAGACTATGCAAGACATGTTGTAGATGAAACTTTTG CTGCAAATAAGGAGGCTGAAAAGGAGGCCTTTGAAGGAGCTGAAAGAAAGAGGAAGGCTAGAGA AGAAGAGGAAGCACGGAGGGCACGGGAGGAAGGGGAGAGACGAAGGCGGGAGAGGGATAGGGAC CGCGGCAGGGACCGATACAAGGATAGATATAAG
Genomic sequence	ATGGGTGGGATAGCCGCTGGGTGAAATCTGATTGGAAGAAGAGCCAAGGACAAGCTGGAACCTT CCGACACACAGCGGGAACCTACTCTGGAGACCCTGACGATAAAGGTGATGGTTTATTCATGAGT GCTATCTTATGTGCAGTAAGGGGGGCATATAGCCCTACCCTTTACTTGTTTGTTGTGTTTTACC AAAAAAAACTGTATTTGATAGTGACAGTGGCTATTTTGATACCCAGTTTCCAACCAGATATGCC TTGAATCTATCCATGTTAATACATCCACTAAACTTGAGCATTTTCTGAAACTTCAATCAAAGAG CTCAGGCTGCATTCCATGTGGCCCCTGTTTTTATCATAAACATTTTATGTTAGAAAACAAGAGA AACATTCCACGATTTGTGCATACTATATCAATCATGTTCAACTTTTAAAGCCACAAAATATATA ACCTTATTTTCCATGGTTTATTTCATACGTCGTATGATTATTTGCATTATGGAATCATCTTTTC AGGTATACAAACAACTGGGGATGCCAAACATTTTGCTATATCAGCAAAATTCCCACAATTTAGT AACAAGGACCGGACATTGGTGATCCAGTACTCTCTAAAGATTGAGCAAGATATTGAATGCGGTG GTGCTTACATCAAACTTATGTCTGGTTATCTCAACCAGAAGAAATTTGGTGGCGACACTCCTTA CAGGTCGGTTTGCTCTCTGTGTTTGGCTAAAAAAGTTTGTTTTAATGTTCAAAAGTAACCATGA ACTCTTCAAATGCAACTTTTCAGTCTTCACCTTAATATAGAACATTTTTTTGTAAAATCTGATA GTAATCGTACCTTCGGATCTTGCGCATATGCCTAGAGAATTATCATTGGTAACTTGGTGTATTG GTCATCCTTTAAGTTGATTTTATTTGTCAAGGAAAGGCAATAACTTTACCAAAAATTTATTAAC ACACTGTGTTAGCGGTCTCACCGAGTCACACTGGGTCGTGGGTTTGAAACAGCCTCTCTGCATT TGTGCGGGAAGCCTTGCATCTGTTTGTCCCTTCCCTAGATCCTACTCATGCGGGAGCCTCTGTC ACTGACTCTGCCCTTTTTTACCACTGCACCAGACCTCATTGCCCTCCTATTGAACTATTAGAAA TTATTCAGTCTGTCTTAGCTTATACTGAATATTACCTACTAAATGTCTTGATATTTGCTTATGC AGCTTCATGTTTGGGCCTGATATATGTGGGGATCAGAAAAAGAAGCTCCATCTCATACTTTCAT ACCAAGGGCAAAACTACCCTATCAAGAAAGAACTAAAATGTGAAACAGACAAGTTGACACATTT TTACACATTTATTCTTAGACCTGATGCCACTTATAGCATCCTTATCGATAACCGGGAGAGAGAA TTCGGGAGCATGTACACTGACTGGGATATCCTTCCTCCTCGTAAGATCAAAGATGTTAATGCAA AAAAGGTTTGAGATTTTTTTGGTGTGATGAAAGCATTGTTATACAGTAATTTCAATCATGCCTT TCATTATGCATCCGTTTCTTTCAGCCAAAAGACTGGGATGACAGGGAATATATTGAAGATCCTG ATCAAGTTAAGCCAGAGGTATGCCTTGTTATATTTCCTGTCTTAGGACTTATCTTGATCAATAA TTCTATTATAACCTTTTACCTGAACTGAACAGGGATATGATTCAATTCCTAAAGAGATACCTGA TCCCAAGGACAAAAAGGTATGCATGATTCTGAGTTTGTTTAATATGCATCCAGTTCGGTTTTAA CAATTTAATTGTCACTTTCATGCTTCAGAGCACTTACTCAGATCTCAGTATGCAAATGATAGAT CTTCACTATTTATGTTATTAGACAAATGAGGATTGAGAAACATTCAACTTTATTCATGCATGCA TGTTACTTTTGCTTTATTTTTTTAGCAACTTAGTCACTTTTTTCCTGGTTTGCTAGTGTGTATC AGTAATTTCTAAACATTCATGACTAAACGAACACAAGATGACAGTATTTTTGTTTTATGCTAAA TCAGCCTGAGTCATGGGATGACGATGACGATGGTACATGGAAGCCTAGAATGATACCTAATCCA GAATACAAGGGACCATGGAAGCGGAAGGTTTATTTACTTTATACTAGTTATAATTTCTTAACCT TTTGTTCATTTGAATATTTATGTACTCATGACTTTTCTCTCTCAGAAAATTAAGAATCCTAACT ACAAAGGAAAATGGAAGACCCCATGGATTGTCAATCCAGGTGAGAGACATATATCTGATCTTCT GCTCTTTACATATTGTCATGTAGATTATGTCTACTGTCTGTTGATGACAGTTTTGAGTATTTCT CTTGGCAGTAAGTTTACTTCATATCTGTCTTTGAATTGAATCTTGCACGCTTGACCCAGCATTA ACTAAACTATCTTTTGCAGAGTTTGAGGATGACCCAGACCTATATGTTCTGAAACCTTTGCAGT ATGTGGGGATTGAAGTATGGCAGGTATCAAACATCATAACTGGGCAAAGACGTGTGCCCCATCA CAATCTTTGGTTGTATCAAATAAATTAAACCCTATCTGAACTTACTACTACCATGGTATACAGG TCAAAGCTGGTTCAGTTTTTGACAACATTTTGATTTGCGATGACCCAGACTATGCAAGACATGT TGTAGATGAAACTTTTGCTGCAAATAAGGAGGTAGAGGCACGGCATGTTATGATCCATGTTGTC CCTCCGTAGGAACCCTTGTCTCATTTTATTTCTATGCTGCAGGCTGAAAAGGAGGCCTTTGAAG GAGCTGAAAGAAAGAGGAAGGCTAGAGAAGAAGAGGTTAATTAACATGGAATCTTACTCTCTTT CTGCTCTGGTCGCTGTTGCCTGTTAACAATTCTGAAACTGTGAATGTGAGCCTTGGAGGAGTTA ACAGGACGTTGCTTTTCCACAGGAAGCACGGAGGGCACGGGAGGAAGGGGAGAGACGAAGGCGG GAGAGGGATAGGGACCGCGGCAGGGACCGATACAAGGATAGATATAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.151893232

Conservation Information
Conserved circRNAs	NA
PMCS	0.151893232

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							161705626-161702941(+)
161703590-161702952(+)
161703476-161705607(-)
						
						Potential amino acid sequence
						
							MKLLLQIRRLKRRPLKELKERGRLEKKRKHGGHGRKGRDEGGRGIGTAAGTDTRIDIRWVG*(+
)
MSGYLNQKKFGGDTPYSFMFGPDICGDQKKKLHLILSYQGQNYPIKKELKCETDKLTHFYTFIL
RPDATYSILIDNREREFGSMYTDWDILPPRKIKDVNAKKPKDWDDREYIEDPDQVKPEGYDSIP
KEIPDPKDKKPESWDDDDDGTWKPRMIPNPEYKGPWKRKKIKNPNYKGKWKTPWIVNPEFEDDP
DLYVLKPLQYVGIEVWQVKAGSVFDNILICDDPDYARHVVDETFAANKEAEKEAFEGAERKRKA
REEEEARRAREEGERRRRERDRDRGRDRYKDRYKMGGIAAG*(+)
MFGIPSCLYTFIVRVSRVGSRCVSEGSSLSLALLPIRFHPAAIPPILYLSLYRSLPRSLSLSRL
RLSPSSRALRASSSSLAFLFLSAPSKASFSASLFAAKVSSTTCLA*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to drought stress

Functional Information
Coding potential	Y
Potential coding position	161705626-161702941(+) 161703590-161702952(+) 161703476-161705607(-)
Potential amino acid sequence	MKLLLQIRRLKRRPLKELKERGRLEKKRKHGGHGRKGRDEGGRGIGTAAGTDTRIDIRWVG(+ ) MSGYLNQKKFGGDTPYSFMFGPDICGDQKKKLHLILSYQGQNYPIKKELKCETDKLTHFYTFIL RPDATYSILIDNREREFGSMYTDWDILPPRKIKDVNAKKPKDWDDREYIEDPDQVKPEGYDSIP KEIPDPKDKKPESWDDDDDGTWKPRMIPNPEYKGPWKRKKIKNPNYKGKWKTPWIVNPEFEDDP DLYVLKPLQYVGIEVWQVKAGSVFDNILICDDPDYARHVVDETFAANKEAEKEAFEGAERKRKA REEEEARRAREEGERRRRERDRDRGRDRYKDRYKMGGIAAG(+) MFGIPSCLYTFIVRVSRVGSRCVSEGSSLSLALLPIRFHPAAIPPILYLSLYRSLPRSLSLSRL RLSPSSRALRASSSSLAFLFLSAPSKASFSASLFAAKVSSTTCLA*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to drought stress

			
						 Other Information
					
						References
						Han et al., 2020; Ma et al., 2021b;Zhang et al., 2019

circRNA

Detail information of Zm00001d038648_circ_g.2

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