Splice junction sequence |
CAGTTCATTAGCAGTAGGAAGCCTCAGCTCTTGTCGTGCAGCCTCAAAAATCCCATTATCTCTG TCATCTGATATATATTGCCACCTTGCATACCCATGCaaataggttcaaggacaggcaattctct cagcatttcactgtagtctggaacggccggtctatgaccaccaggaaaatcttgttcagcgaga tcatcagg
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 392 Transcript exons: 4169544-4169664,4169775-4169915,4170013-4170142 AAATAGGTTCAAGGACAGGCAATTCTCTCAGCATTTCACTGTAGTCTGGAACGGCCGGTCTATG ACCACCAGGAAAATCTTGTTCAGCGAGATCATCAGGAACAGGGGTTTTTGTTTTAATCACAGCG TATTCAAGATTCAAACATCTCTCCAAAAGATGGTATCTCTTTCTAATAAACTCAACTATCTTTC TCTGTGTATCCCTGTAATGGATCATGCTCGTTGGGTTCGACTGGCCTTCTTGTGTGCTTTCCAG ATTTCCGTTTGTCTCATTGTTTGAGTGAGAACTAATCAGTTCATTAGCAGTAGGAAGCCTCAGC TCTTGTCGTGCAGCCTCAAAAATCCCATTATCTCTGTCATCTGATATATATTGCCACCTTGCAT ACCCATGC
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Genomic sequence |
AAATAGGTTCAAGGACAGGCAATTCTCTCAGCATTTCACTGTAGTCTGGAACGGCCGGTCTATG ACCACCAGGAAAATCTTGTTCAGCGAGATCATCAGGAACAGGGGTTTTTGTTTTAATCTGCAAA ATACCAAAAATTGCATGTTATACATCCTAAAACCAATAATCTTAGTGTTACCACCCGTGTGAGC TTTGGGTGCTATATTTAAGGAAATAGGTCACAGGCATACCACAGCGTATTCAAGATTCAAACAT CTCTCCAAAAGATGGTATCTCTTTCTAATAAACTCAACTATCTTTCTCTGTGTATCCCTGTAAT GGATCATGCTCGTTGGGTTCGACTGGCCTTCTTGTGTGCTTTCCAGATTTCCCTGTCAGAGATC CCAAAAAATGAAATGAACCGCATCCTTTAGTCAAGCAGAAATCCTATAACTTCTGTAGAAAAAA GTTATGTGCGCGCACACTAACGTTTGTCTCATTGTTTGAGTGAGAACTAATCAGTTCATTAGCA GTAGGAAGCCTCAGCTCTTGTCGTGCAGCCTCAAAAATCCCATTATCTCTGTCATCTGATATAT ATTGCCACCTTGCATACCCATGC |