Detailed infomation of each circRNA
General Information | |
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CircRNA Name | 1_circ_ag.4 |
ID in PlantcircBase | ath_circ_003660 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 7189855-7206426 JBrowse» |
Reference genome | TAIR10.38 |
Type | ag-circRNA |
Identification method | find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | 1_circ_ag.2 AT1G20720_circ_g.3 AT1G20720_circ_g.5 |
Support reads | 2 |
Tissues | whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.287124568 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | ath-miR1888a |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |