Plant Circular RNA Database

Detail information of Solyc01g080240.2_circ_g.2

			
						 General Information
					
						CircRNA Name
						Solyc01g080240.2_circ_g.2
					
						ID in PlantcircBase
						sly_circ_000192
					
						Alias
						NA
					
						Organism
						
							Solanum lycopersicum						
					
						Position
						
							chr1: 79461940-79465035  JBrowse»						
					
						Reference genome
						
							SL2.50.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Solyc01g080240.2						
					
						Parent gene annotation
						
							Mitogen-activated protein kinase 16
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Solyc01g080240.2_circ_g.1 						
					
						Support reads
						2
					
						Tissues
						fruit
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Solyc01g080240.2.1:8

General Information
CircRNA Name	Solyc01g080240.2_circ_g.2
ID in PlantcircBase	sly_circ_000192
Alias	NA
Organism	Solanum lycopersicum
Position	chr1: 79461940-79465035 JBrowse»
Reference genome	SL2.50.38
Type	e-circRNA
Identification method	CIRI
Parent gene	Solyc01g080240.2
Parent gene annotation	Mitogen-activated protein kinase 16
Parent gene strand	+
Alternative splicing	Solyc01g080240.2_circ_g.1
Support reads	2
Tissues	fruit
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Solyc01g080240.2.1:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TCTAAGTGCTCCATCAAAGAAGATGAGAAACCACAAGCGGACCGGAGTTCAATGATCCCCATGA
CAAGGCTGCCTCTCCAAGTTCCTCAGAATGTTCAAGgggtctggagatgtagatttctttactg
aatacggtgaagggagtcgatacaagatagaggaagttattggcaaaggtagctatggtgtagt
atgctctg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1381
Transcript exons: 79461940-79462348,79462515-79462642,79462748-79462807,79
462932-79463081,79463167-79463322,79463413-79463624,7946
4607-79464711,79464875-79465035
GGGTCTGGAGATGTAGATTTCTTTACTGAATACGGTGAAGGGAGTCGATACAAGATAGAGGAAG
TTATTGGCAAAGGTAGCTATGGTGTAGTATGCTCTGCGTATGATACCCATCTAGGGGAAAAAGT
TGCAATCAAGAAGATAAATGACATCTTTGAACATGTCTCTGATGCCACACGTATTCTTCGTGAG
ATCAAGCTTCTTAGGCTTCTTCGGCATCCAGATATAGTGGAAATCAAGCATATATTGTTACCTC
CTTCTCGGAGGGAATTCAAGGATATCTATGTTGTCTTTGAACTCATGGAATCTGATTTGCACCA
AGTCATTAAAGCAAATGATGATCTGACGCCGGAACATTATCAATTTTTCCTTTATCAGCTTCTT
CGAGGGCTGAAATATATACACACAGCCAATGTCTTTCACCGTGACCTGAAACCCAAAAATATAT
TAGCAAATGCTGACTGCAAGCTTAAGATCTGTGACTTTGGTCTTGCAAGAGTGGCCTTCAATGA
TACTCCAACAGCTATATTTTGGACTGATTATGTTGCTACGAGGTGGTATAGGGCTCCTGAATTG
TGTGGATCATTTTTCTCTAAGTATACACCAGCAATTGATATATGGAGCATTGGATGTATATTTG
CAGAACTACTGACTGGGAAGCCTCTCTTTCCAGGTAAAAATGTGGTTCACCAATTAGACTTGAT
GACCGATCTGTTGGGCACACCCTCCCCAGAATCCATTGCCAGGATAAGAAATGAAAAGGCTCGG
AGGTATTTGAGCAGTATGCGTAAGAAAAAGCCTGTACCTTTCTCCCATAAATTTCCACATGCAG
ATCCCCTTGCACTTCGTTTGCTAGAAAGGATGCTTGCTTTTGATCCCAAGGATCGTCCTAATGC
AGAAGAGGCTCTTGCAGATCCATATTTCAGGAATCTAGCCAAAGTGGAAAGAGAACCCTCTGCT
CAACCAGTTACAAAAATGGAATTTGAGTTTGAAAGGCGAAGGATAACAAAGGAGGATGTGAGGG
AGCTGATATACAGAGAAATTCTTGAATACCACCCAAAAATGTTGAAGGAGTTCTTAGAGGGGCA
AGAACCTACAGGTTTCATGTACCCAAGTGCCGTTGACAAATTCAAGAAGCAGTTTGCATATCTT
GAAGAGCATTATGGCAAAGGAGGCGCTGCTGCTCCACCTGAGAGGCAGCACTCATCATCTCTAC
CTAGGGCTTGTGTATTATACTCAGACAATTCAGTGCAAAATCCACTTGAAGTTGCAAATGATCT
TTCTAAGTGCTCCATCAAAGAAGATGAGAAACCACAAGCGGACCGGAGTTCAATGATCCCCATG
ACAAGGCTGCCTCTCCAAGTTCCTCAGAATGTTCAAG
						
					

						Genomic sequence
						
							GGGTCTGGAGATGTAGATTTCTTTACTGAATACGGTGAAGGGAGTCGATACAAGATAGAGGAAG
TTATTGGCAAAGGTAGCTATGGTGTAGTATGCTCTGCGTATGATACCCATCTAGGGGAAAAAGT
TGCAATCAAGAAGATAAATGACATCTTTGAACATGTCTCTGATGCCACACGTATTCTTCGTGAG
ATCAAGCTTCTTAGGCTTCTTCGGCATCCAGATATAGTGGAAATCAAGCATATATTGTTACCTC
CTTCTCGGAGGGAATTCAAGGATATCTATGTTGTCTTTGAACTCATGGAATCTGATTTGCACCA
AGTCATTAAAGCAAATGATGATCTGACGCCGGAACATTATCAATTTTTCCTTTATCAGCTTCTT
CGAGGGCTGAAATATATACACACAGGTTGTATGCTGGCTAAAATTGTGCTTTAATTACTATGAC
TTTCTTCCACGAAGACCATATTTATGTATTTTGACATTAACATAGCCATATTAGCTGCAATGGT
ATGCTTCAATCCATGAAAGTTTCTCCAATTCTAACAATGCCTCTATGTTGGAATATTATGCAGC
CAATGTCTTTCACCGTGACCTGAAACCCAAAAATATATTAGCAAATGCTGACTGCAAGCTTAAG
ATCTGTGACTTTGGTCTTGCAAGAGTGGCCTTCAATGATACTCCAACAGCTATATTTTGGACTG
TATGCTTCTTAATGCTCTGCACAAAATTTATAACTTCGAAAATAGCTCTGTTTGAGATTAGAGG
AACATGTAACATCTAATAACCTGGTTATTTGTTCCTGTAGGATTATGTTGCTACGAGGTGGTAT
AGGGCTCCTGAATTGTGTGGATCATTTTTCTCTAAGGTGTGAATATACACTTTTTTGCTTTAGA
TAGTTATTCTGATTTATTGGTGAATCAGCTATAATTTCTTCATTTTATTATGATAACAGCACAT
TCTAAGATCAGTTTATTGTGATTTGTCCTCAGTATACACCAGCAATTGATATATGGAGCATTGG
ATGTATATTTGCAGAACTACTGACTGGGAAGCCTCTCTTTCCAGGTAAAAATGTGGTTCACCAA
TTAGACTTGATGACCGATCTGTTGGGCACACCCTCCCCAGAATCCATTGCCAGGGTAAGTCCCT
ATTTCCCCCCTGGAATACAAGATGTTATACGGTGATAGTTTTGTGGCTAATATATGGTTGCTTA
TGTGCCTATAGATAAGAAATGAAAAGGCTCGGAGGTATTTGAGCAGTATGCGTAAGAAAAAGCC
TGTACCTTTCTCCCATAAATTTCCACATGCAGATCCCCTTGCACTTCGTTTGCTAGAAAGGATG
CTTGCTTTTGATCCCAAGGATCGTCCTAATGCAGAAGAGGTACAAATACTTTGTCTATCTGTTT
CCACAAAGTAGTATTATTTGTGACTCCAGCTCCTAACTGGGCTTTTTTCCTTGTTCAAAATTCA
GGCTCTTGCAGATCCATATTTCAGGAATCTAGCCAAAGTGGAAAGAGAACCCTCTGCTCAACCA
GTTACAAAAATGGAATTTGAGTTTGAAAGGCGAAGGATAACAAAGGAGGATGTGAGGGAGCTGA
TATACAGAGAAATTCTTGAATACCACCCAAAAATGTTGAAGGAGTTCTTAGAGGGGCAAGAACC
TACAGGTTTCATGTACCCAAGGTACATTTGTCTCAAACTAAGTTTTCTTCTTGTCTTTGAACCC
GTGTATTGCATGGCTTTCTCCGCATCCATACCTCTTATTTGCATGTGCGCGTCAATGTGTTCAT
AGCACGTCTGTATAATATCAAAAATTAATTAATCAATGTAGTTCTGGGGTAAATTGCTTTACGT
ATTGTGAATCAGGGAAGACTTCCTTTTTAGTTTATCCTCCTTGGGGTAGTTCAGAGTTCAAAGG
AACACTTTAACTTCATTTCCATGTTAGTCAAACTTTGAGAACTCTTTTAATGTTGGATTAATGG
GAGTGGTTCTGGTGTTGTTTTCTTTCACATAGAAATGGGTAAATCTAGACTTCTTATACTCTAG
GAAGGTCTTGGAATGAAACCAGCCCATTCGATATGACAGTATGCTTATTATTTTATATTGAAGG
TAATTCATGTGGATCTCTGAACTTCCCATACATGGATGTGGTAGTATCTTGGTCAACCCTCATT
TTGCCAATCACATAAATTATGATTCATCTTCCTGATAAAGAAAATAGCATGGTTCATCCGACAT
TGCTTGAGAAAGATGTAGCCAACTTTAGAAGCTTATAAGTTATAAACGGAGGGGAAATATTGCA
CTTTGACTCAAGTTTTTCTCATTATCTCAAGAAGTTAAACTTCATACTATCATACTGTACTTGG
TTCTCTCCCTGGTCAGTCATGCCAGACTTATTATTAAAAATATGTTGTGTTATCAAGCCTCACT
CAGACTGCTTTTAACCCGCTAGAGAACTTTTCTCTAAAGAGAAATCATTGATCACTTGGTCCTA
TATTATCACTTGGTCCTATATTATAATAAGCTCATTATTACTTGGAAAAATCTCATTATAGAGT
GCTATTTACTGTTGTTCCTTTAAAGAAAGTAGAAATTTAATTTGGTTTCATCGCGCTTTACTGG
AGCCAAAAAGGATTTACTTATAGTTTCTTGTGTCACTCCCCAGTGCCGTTGACAAATTCAAGAA
GCAGTTTGCATATCTTGAAGAGCATTATGGCAAAGGAGGCGCTGCTGCTCCACCTGAGAGGCAG
CACTCATCATCTCTACCTAGGTTAGTCCCTGGCAGTCATGCTGGTTGATCAAATCCTTTTTTCC
TTTGACCATTTTTTATTGTTTTCGTAGTTTTTCTAATAAAAGGAATTCCTGCAAGTTTTGGCTA
TCAGACATTTCTCAATTATTGCACAACTTTAGCCACTGATAAATTTTAGATACAGGGCTTGTGT
ATTATACTCAGACAATTCAGTGCAAAATCCACTTGAAGTTGCAAATGATCTTTCTAAGTGCTCC
ATCAAAGAAGATGAGAAACCACAAGCGGACCGGAGTTCAATGATCCCCATGACAAGGCTGCCTC
TCCAAGTTCCTCAGAATGTTCAAG
						
					

			
		

Sequences
Splice junction sequence	TCTAAGTGCTCCATCAAAGAAGATGAGAAACCACAAGCGGACCGGAGTTCAATGATCCCCATGA CAAGGCTGCCTCTCCAAGTTCCTCAGAATGTTCAAGgggtctggagatgtagatttctttactg aatacggtgaagggagtcgatacaagatagaggaagttattggcaaaggtagctatggtgtagt atgctctg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1381 Transcript exons: 79461940-79462348,79462515-79462642,79462748-79462807,79 462932-79463081,79463167-79463322,79463413-79463624,7946 4607-79464711,79464875-79465035 GGGTCTGGAGATGTAGATTTCTTTACTGAATACGGTGAAGGGAGTCGATACAAGATAGAGGAAG TTATTGGCAAAGGTAGCTATGGTGTAGTATGCTCTGCGTATGATACCCATCTAGGGGAAAAAGT TGCAATCAAGAAGATAAATGACATCTTTGAACATGTCTCTGATGCCACACGTATTCTTCGTGAG ATCAAGCTTCTTAGGCTTCTTCGGCATCCAGATATAGTGGAAATCAAGCATATATTGTTACCTC CTTCTCGGAGGGAATTCAAGGATATCTATGTTGTCTTTGAACTCATGGAATCTGATTTGCACCA AGTCATTAAAGCAAATGATGATCTGACGCCGGAACATTATCAATTTTTCCTTTATCAGCTTCTT CGAGGGCTGAAATATATACACACAGCCAATGTCTTTCACCGTGACCTGAAACCCAAAAATATAT TAGCAAATGCTGACTGCAAGCTTAAGATCTGTGACTTTGGTCTTGCAAGAGTGGCCTTCAATGA TACTCCAACAGCTATATTTTGGACTGATTATGTTGCTACGAGGTGGTATAGGGCTCCTGAATTG TGTGGATCATTTTTCTCTAAGTATACACCAGCAATTGATATATGGAGCATTGGATGTATATTTG CAGAACTACTGACTGGGAAGCCTCTCTTTCCAGGTAAAAATGTGGTTCACCAATTAGACTTGAT GACCGATCTGTTGGGCACACCCTCCCCAGAATCCATTGCCAGGATAAGAAATGAAAAGGCTCGG AGGTATTTGAGCAGTATGCGTAAGAAAAAGCCTGTACCTTTCTCCCATAAATTTCCACATGCAG ATCCCCTTGCACTTCGTTTGCTAGAAAGGATGCTTGCTTTTGATCCCAAGGATCGTCCTAATGC AGAAGAGGCTCTTGCAGATCCATATTTCAGGAATCTAGCCAAAGTGGAAAGAGAACCCTCTGCT CAACCAGTTACAAAAATGGAATTTGAGTTTGAAAGGCGAAGGATAACAAAGGAGGATGTGAGGG AGCTGATATACAGAGAAATTCTTGAATACCACCCAAAAATGTTGAAGGAGTTCTTAGAGGGGCA AGAACCTACAGGTTTCATGTACCCAAGTGCCGTTGACAAATTCAAGAAGCAGTTTGCATATCTT GAAGAGCATTATGGCAAAGGAGGCGCTGCTGCTCCACCTGAGAGGCAGCACTCATCATCTCTAC CTAGGGCTTGTGTATTATACTCAGACAATTCAGTGCAAAATCCACTTGAAGTTGCAAATGATCT TTCTAAGTGCTCCATCAAAGAAGATGAGAAACCACAAGCGGACCGGAGTTCAATGATCCCCATG ACAAGGCTGCCTCTCCAAGTTCCTCAGAATGTTCAAG
Genomic sequence	GGGTCTGGAGATGTAGATTTCTTTACTGAATACGGTGAAGGGAGTCGATACAAGATAGAGGAAG TTATTGGCAAAGGTAGCTATGGTGTAGTATGCTCTGCGTATGATACCCATCTAGGGGAAAAAGT TGCAATCAAGAAGATAAATGACATCTTTGAACATGTCTCTGATGCCACACGTATTCTTCGTGAG ATCAAGCTTCTTAGGCTTCTTCGGCATCCAGATATAGTGGAAATCAAGCATATATTGTTACCTC CTTCTCGGAGGGAATTCAAGGATATCTATGTTGTCTTTGAACTCATGGAATCTGATTTGCACCA AGTCATTAAAGCAAATGATGATCTGACGCCGGAACATTATCAATTTTTCCTTTATCAGCTTCTT CGAGGGCTGAAATATATACACACAGGTTGTATGCTGGCTAAAATTGTGCTTTAATTACTATGAC TTTCTTCCACGAAGACCATATTTATGTATTTTGACATTAACATAGCCATATTAGCTGCAATGGT ATGCTTCAATCCATGAAAGTTTCTCCAATTCTAACAATGCCTCTATGTTGGAATATTATGCAGC CAATGTCTTTCACCGTGACCTGAAACCCAAAAATATATTAGCAAATGCTGACTGCAAGCTTAAG ATCTGTGACTTTGGTCTTGCAAGAGTGGCCTTCAATGATACTCCAACAGCTATATTTTGGACTG TATGCTTCTTAATGCTCTGCACAAAATTTATAACTTCGAAAATAGCTCTGTTTGAGATTAGAGG AACATGTAACATCTAATAACCTGGTTATTTGTTCCTGTAGGATTATGTTGCTACGAGGTGGTAT AGGGCTCCTGAATTGTGTGGATCATTTTTCTCTAAGGTGTGAATATACACTTTTTTGCTTTAGA TAGTTATTCTGATTTATTGGTGAATCAGCTATAATTTCTTCATTTTATTATGATAACAGCACAT TCTAAGATCAGTTTATTGTGATTTGTCCTCAGTATACACCAGCAATTGATATATGGAGCATTGG ATGTATATTTGCAGAACTACTGACTGGGAAGCCTCTCTTTCCAGGTAAAAATGTGGTTCACCAA TTAGACTTGATGACCGATCTGTTGGGCACACCCTCCCCAGAATCCATTGCCAGGGTAAGTCCCT ATTTCCCCCCTGGAATACAAGATGTTATACGGTGATAGTTTTGTGGCTAATATATGGTTGCTTA TGTGCCTATAGATAAGAAATGAAAAGGCTCGGAGGTATTTGAGCAGTATGCGTAAGAAAAAGCC TGTACCTTTCTCCCATAAATTTCCACATGCAGATCCCCTTGCACTTCGTTTGCTAGAAAGGATG CTTGCTTTTGATCCCAAGGATCGTCCTAATGCAGAAGAGGTACAAATACTTTGTCTATCTGTTT CCACAAAGTAGTATTATTTGTGACTCCAGCTCCTAACTGGGCTTTTTTCCTTGTTCAAAATTCA GGCTCTTGCAGATCCATATTTCAGGAATCTAGCCAAAGTGGAAAGAGAACCCTCTGCTCAACCA GTTACAAAAATGGAATTTGAGTTTGAAAGGCGAAGGATAACAAAGGAGGATGTGAGGGAGCTGA TATACAGAGAAATTCTTGAATACCACCCAAAAATGTTGAAGGAGTTCTTAGAGGGGCAAGAACC TACAGGTTTCATGTACCCAAGGTACATTTGTCTCAAACTAAGTTTTCTTCTTGTCTTTGAACCC GTGTATTGCATGGCTTTCTCCGCATCCATACCTCTTATTTGCATGTGCGCGTCAATGTGTTCAT AGCACGTCTGTATAATATCAAAAATTAATTAATCAATGTAGTTCTGGGGTAAATTGCTTTACGT ATTGTGAATCAGGGAAGACTTCCTTTTTAGTTTATCCTCCTTGGGGTAGTTCAGAGTTCAAAGG AACACTTTAACTTCATTTCCATGTTAGTCAAACTTTGAGAACTCTTTTAATGTTGGATTAATGG GAGTGGTTCTGGTGTTGTTTTCTTTCACATAGAAATGGGTAAATCTAGACTTCTTATACTCTAG GAAGGTCTTGGAATGAAACCAGCCCATTCGATATGACAGTATGCTTATTATTTTATATTGAAGG TAATTCATGTGGATCTCTGAACTTCCCATACATGGATGTGGTAGTATCTTGGTCAACCCTCATT TTGCCAATCACATAAATTATGATTCATCTTCCTGATAAAGAAAATAGCATGGTTCATCCGACAT TGCTTGAGAAAGATGTAGCCAACTTTAGAAGCTTATAAGTTATAAACGGAGGGGAAATATTGCA CTTTGACTCAAGTTTTTCTCATTATCTCAAGAAGTTAAACTTCATACTATCATACTGTACTTGG TTCTCTCCCTGGTCAGTCATGCCAGACTTATTATTAAAAATATGTTGTGTTATCAAGCCTCACT CAGACTGCTTTTAACCCGCTAGAGAACTTTTCTCTAAAGAGAAATCATTGATCACTTGGTCCTA TATTATCACTTGGTCCTATATTATAATAAGCTCATTATTACTTGGAAAAATCTCATTATAGAGT GCTATTTACTGTTGTTCCTTTAAAGAAAGTAGAAATTTAATTTGGTTTCATCGCGCTTTACTGG AGCCAAAAAGGATTTACTTATAGTTTCTTGTGTCACTCCCCAGTGCCGTTGACAAATTCAAGAA GCAGTTTGCATATCTTGAAGAGCATTATGGCAAAGGAGGCGCTGCTGCTCCACCTGAGAGGCAG CACTCATCATCTCTACCTAGGTTAGTCCCTGGCAGTCATGCTGGTTGATCAAATCCTTTTTTCC TTTGACCATTTTTTATTGTTTTCGTAGTTTTTCTAATAAAAGGAATTCCTGCAAGTTTTGGCTA TCAGACATTTCTCAATTATTGCACAACTTTAGCCACTGATAAATTTTAGATACAGGGCTTGTGT ATTATACTCAGACAATTCAGTGCAAAATCCACTTGAAGTTGCAAATGATCTTTCTAAGTGCTCC ATCAAAGAAGATGAGAAACCACAAGCGGACCGGAGTTCAATGATCCCCATGACAAGGCTGCCTC TCCAAGTTCCTCAGAATGTTCAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.571685083

Conservation Information
Conserved circRNAs	NA
PMCS	0.571685083

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							79462241-79461965(+)
79465028-79461965(+)
79462055-79464951(-)
						
						Potential amino acid sequence
						
							MESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGL
ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV
VHQLDLMTDLLGTPSPESIARIRNEKARRYLSSMRKKKPVPFSHKFPHADPLALRLLERMLAFD
PKDRPNAEEALADPYFRNLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKML
KEFLEGQEPTGFMYPSAVDKFKKQFAYLEEHYGKGGAAAPPERQHSSSLPRACVLYSDNSVQNP
LEVANDLSKCSIKEDEKPQADRSSMIPMTRLPLQVPQNVQGVWRCRFLY*(+)
MFKGSGDVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTHLGEKVAIKKINDIFEHVSDATRI
LREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLY
QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA
PELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDLLGTPSPESIARIRNE
KARRYLSSMRKKKPVPFSHKFPHADPLALRLLERMLAFDPKDRPNAEEALADPYFRNLAKVERE
PSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLEGQEPTGFMYPSAVDKFKKQF
AYLEEHYGKGGAAAPPERQHSSSLPRACVLYSDNSVQNPLEVANDLSKCSIKEDEKPQADRSSM
IPMTRLPLQVPQNVQGVWRCRFLY*(+)
MGIIRRAYYTIATFANNFLYLVSTPFTVFSKEIYISRPLEHSEELGEAALSWGSLNSGPLVVSH
LL*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	79462241-79461965(+) 79465028-79461965(+) 79462055-79464951(-)
Potential amino acid sequence	MESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGL ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV VHQLDLMTDLLGTPSPESIARIRNEKARRYLSSMRKKKPVPFSHKFPHADPLALRLLERMLAFD PKDRPNAEEALADPYFRNLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKML KEFLEGQEPTGFMYPSAVDKFKKQFAYLEEHYGKGGAAAPPERQHSSSLPRACVLYSDNSVQNP LEVANDLSKCSIKEDEKPQADRSSMIPMTRLPLQVPQNVQGVWRCRFLY(+) MFKGSGDVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTHLGEKVAIKKINDIFEHVSDATRI LREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLY QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA PELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDLLGTPSPESIARIRNE KARRYLSSMRKKKPVPFSHKFPHADPLALRLLERMLAFDPKDRPNAEEALADPYFRNLAKVERE PSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLEGQEPTGFMYPSAVDKFKKQF AYLEEHYGKGGAAAPPERQHSSSLPRACVLYSDNSVQNPLEVANDLSKCSIKEDEKPQADRSSM IPMTRLPLQVPQNVQGVWRCRFLY(+) MGIIRRAYYTIATFANNFLYLVSTPFTVFSKEIYISRPLEHSEELGEAALSWGSLNSGPLVVSH LL*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zuo et al., 2016

circRNA

Detail information of Solyc01g080240.2_circ_g.2

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