Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Zm00001d028238_circ_g.5 |
| ID in PlantcircBase | zma_circ_006440 |
| Alias | zma_circ_0000535 |
| Organism | Zea mays |
| Position | chr1: 27592119-27596720 JBrowse» |
| Reference genome | AGPv4.38 |
| Type | ue-circRNA |
| Identification method | find_circ |
| Parent gene | Zm00001d028238 |
| Parent gene annotation |
CCAAT-binding factor |
| Parent gene strand | - |
| Alternative splicing | Zm00001d028238_circ_g.1 Zm00001d028238_circ_g.2 Zm00001d028238_circ_g.3 Zm00001d028238_circ_g.4 |
| Support reads | NA |
| Tissues | leaf, root |
| Exon boundary | Yes-No |
| Splicing signals | CT-AC |
| Number of exons covered | Zm00001d028238_T007:3 Zm00001d028238_T001:3 Zm00001d028238_T006:3 Zm00001d028238_T008:4 Zm00001d028238_T005:3 Zm00001d028238_T004:3 Zm00001d028238_T011:3 Zm00001d028238_T003:3 Zm00001d028238_T002:3 Zm00001d028238_T012:1 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.017261408 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Ma et al., 2021b |