Splice junction sequence |
GCCCAGCCGCGCCATGCGCGCTGCCTCTGCCCGGCTGGAGGTTGAAGACGACCTCCCTCAGCCG AGCCGATGACAGGATGGGCCCACCTCCTGTTTTTCCctcttattgagagggcctgaacctgtct aaatcctttgtctccgcatccatccactcttaggtctcgtgcgctacccccttttattattgcc gaattcat
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 192 Transcript exons: 7452959-7453051,7453584-7453682 CTCTTATTGAGAGGGCCTGAACCTGTCTAAATCCTTTGTCTCCGCATCCATCCACTCTTAGGTC TCGTGCGCTACCCCCTTTTATTATTGCCGCCCAGCCGCGCCATGCGCGCTGCCTCTGCCCGGCT GGAGGTTGAAGACGACCTCCCTCAGCCGAGCCGATGACAGGATGGGCCCACCTCCTGTTTTTCC
Transcript length: 212 Transcript exons: 7452959-7453047,7453560-7453682 CTCTTATTGAGAGGGCCTGAACCTGTCTAAATCCTTTGTCTCCGCATCCATCCACTCTTAGGTC TCGTGCGCTACCCCCTTTTATTATTCGGCCTCGCACCATCCCGGCTGCGCCCAGCCGCGCCATG CGCGCTGCCTCTGCCCGGCTGGAGGTTGAAGACGACCTCCCTCAGCCGAGCCGATGACAGGATG GGCCCACCTCCTGTTTTTCC
Transcript length: 225 Transcript exons: 7452959-7453048,7453545-7453645,7453649-7453682 CTCTTATTGAGAGGGCCTGAACCTGTCTAAATCCTTTGTCTCCGCATCCATCCACTCTTAGGTC TCGTGCGCTACCCCCTTTTATTATTGCGGCCGCTTCCGTGCCGGCCTCGCACCATCCCGGCTGC GCCCAGCCGCGCCATGCGCGCTGCCTCTGCCCGGCTGGAGGTTGAAGACGACCTCCCTCAGCCC CGATGACAGGATGGGCCCACCTCCTGTTTTTCC
Transcript length: 273 Transcript exons: 7452959-7453143,7453595-7453682 CTCTTATTGAGAGGGCCTGAACCTGTCTAAATCCTTTGTCTCCGCATCCATCCACTCTTAGGTC TCGTGCGCTACCCCCTTTTATTATTGCCGAATTCATGTTTTGACAGTTGGCACGCCAGGTAGGG GTGACGTCGAGTTTCCTGTCGAAAAGTGCGATGGAATCAACTTCGTGAGTCACTCGCCATGCGC GCTGCCTCTGCCCGGCTGGAGGTTGAAGACGACCTCCCTCAGCCGAGCCGATGACAGGATGGGC CCACCTCCTGTTTTTCC
Transcript length: 273 Transcript exons: 7452959-7453153,7453605-7453682 CTCTTATTGAGAGGGCCTGAACCTGTCTAAATCCTTTGTCTCCGCATCCATCCACTCTTAGGTC TCGTGCGCTACCCCCTTTTATTATTGCCGAATTCATGTTTTGACAGTTGGCACGCCAGGTAGGG GTGACGTCGAGTTTCCTGTCGAAAAGTGCGATGGAATCAACTTCGTGAGTCACTCGCTTCATCT TCGGCCTCTGCCCGGCTGGAGGTTGAAGACGACCTCCCTCAGCCGAGCCGATGACAGGATGGGC CCACCTCCTGTTTTTCC
Transcript length: 275 Transcript exons: 7452959-7453132,7453582-7453682 CTCTTATTGAGAGGGCCTGAACCTGTCTAAATCCTTTGTCTCCGCATCCATCCACTCTTAGGTC TCGTGCGCTACCCCCTTTTATTATTGCCGAATTCATGTTTTGACAGTTGGCACGCCAGGTAGGG GTGACGTCGAGTTTCCTGTCGAAAAGTGCGATGGAATCAACTTCGTCGCCCAGCCGCGCCATGC GCGCTGCCTCTGCCCGGCTGGAGGTTGAAGACGACCTCCCTCAGCCGAGCCGATGACAGGATGG GCCCACCTCCTGTTTTTCC
Transcript length: 306 Transcript exons: 7452959-7453178,7453597-7453682 CTCTTATTGAGAGGGCCTGAACCTGTCTAAATCCTTTGTCTCCGCATCCATCCACTCTTAGGTC TCGTGCGCTACCCCCTTTTATTATTGCCGAATTCATGTTTTGACAGTTGGCACGCCAGGTAGGG GTGACGTCGAGTTTCCTGTCGAAAAGTGCGATGGAATCAACTTCGTGAGTCACTCGCTTCATCT TCGCTTTGGGAGATTTTTTGCCTCCTCGTGCGCGCTGCCTCTGCCCGGCTGGAGGTTGAAGACG ACCTCCCTCAGCCGAGCCGATGACAGGATGGGCCCACCTCCTGTTTTTCC
Transcript length: 309 Transcript exons: 7452959-7453168,7453584-7453682 CTCTTATTGAGAGGGCCTGAACCTGTCTAAATCCTTTGTCTCCGCATCCATCCACTCTTAGGTC TCGTGCGCTACCCCCTTTTATTATTGCCGAATTCATGTTTTGACAGTTGGCACGCCAGGTAGGG GTGACGTCGAGTTTCCTGTCGAAAAGTGCGATGGAATCAACTTCGTGAGTCACTCGCTTCATCT TCGCTTTGGGAGATTTTTCCCAGCCGCGCCATGCGCGCTGCCTCTGCCCGGCTGGAGGTTGAAG ACGACCTCCCTCAGCCGAGCCGATGACAGGATGGGCCCACCTCCTGTTTTTCC
Transcript length: 331 Transcript exons: 7452959-7453189,7453583-7453682 CTCTTATTGAGAGGGCCTGAACCTGTCTAAATCCTTTGTCTCCGCATCCATCCACTCTTAGGTC TCGTGCGCTACCCCCTTTTATTATTGCCGAATTCATGTTTTGACAGTTGGCACGCCAGGTAGGG GTGACGTCGAGTTTCCTGTCGAAAAGTGCGATGGAATCAACTTCGTGAGTCACTCGCTTCATCT TCGCTTTGGGAGATTTTTTGCCTCCTCGTCACCGAATACGCCCAGCCGCGCCATGCGCGCTGCC TCTGCCCGGCTGGAGGTTGAAGACGACCTCCCTCAGCCGAGCCGATGACAGGATGGGCCCACCT CCTGTTTTTCC
Transcript length: 339 Transcript exons: 7452959-7453178,7453564-7453682 CTCTTATTGAGAGGGCCTGAACCTGTCTAAATCCTTTGTCTCCGCATCCATCCACTCTTAGGTC TCGTGCGCTACCCCCTTTTATTATTGCCGAATTCATGTTTTGACAGTTGGCACGCCAGGTAGGG GTGACGTCGAGTTTCCTGTCGAAAAGTGCGATGGAATCAACTTCGTGAGTCACTCGCTTCATCT TCGCTTTGGGAGATTTTTTGCCTCCTCGCTCGCACCATCCCGGCTGCGCCCAGCCGCGCCATGC GCGCTGCCTCTGCCCGGCTGGAGGTTGAAGACGACCTCCCTCAGCCGAGCCGATGACAGGATGG GCCCACCTCCTGTTTTTCC
Transcript length: 566 Transcript exons: 7452959-7453682 TCATCTTCGCTTTGGGAGATTTTTTGCCTCCTCGTCACCGAATACTCCAGCAGACTCTCTCTCT GACTGGGATTCAAACCAGTCGGGGGGCTCAAGGTCACTTCGAGGTGGCGGAAAGACCGGTTGCT CGGCAGGAACTACTCGCGGTTGCGGGCGTCGACGAAGGCGCGCAGCACGCGAGCGGTGAGGAAG GCGAGCCGTCGCCACCGGCGGGAGGTCGCCGGAGCCTCGCCACATCTTTCCGGCCGCTTCCGTG CCGGCCTCGCACCATCCCGGCTGCGCCCAGCCGCGCCATGCGCGCTGCCTCTGCCCGGCTGGAG GTTGAAGACGACCTCCCTCAGCCGAGCCGATGACAGGATGGGCCCACCTCCTGTTTTTCCCTCT TATTGAGAGGGCCTGAACCTGTCTAAATCCTTTGTCTCCGCATCCATCCACTCTTAGGTCTCGT GCGCTACCCCCTTTTATTATTGCCGAATTCATGTTTTGACAGTTGGCACGCCAGGTAGGGGTGA CGTCGAGTTTCCTGTCGAAAAGTGCGATGGAATCAACTTCGTGAGTCACTCGCT
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Genomic sequence |
CTCTTATTGAGAGGGCCTGAACCTGTCTAAATCCTTTGTCTCCGCATCCATCCACTCTTAGGTC TCGTGCGCTACCCCCTTTTATTATTGCCGAATTCATGTTTTGACAGTTGGCACGCCAGGTAGGG GTGACGTCGAGTTTCCTGTCGAAAAGTGCGATGGAATCAACTTCGTGAGTCACTCGCTTCATCT TCGCTTTGGGAGATTTTTTGCCTCCTCGTCACCGAATACTCCAGCAGACTCTCTCTCTGACTGG GATTCAAACCAGTCGGGGGGCTCAAGGTCACTTCTGTTGAAATTATAAGCACATAATGATTTAA TTTATTCCATAAATAAATCATGACATTGCAGATGTAAACTAGATTGAACGCATCATTAGATCTA CACATGTAAACTAAGCAGTAAAACATGAACAGATCAAATATGCGCAACATGTCGAACACGTACC GAGGTGGCGGAAAGACCGGTTGCTCGGCAGGAACTACTCGCGGTTGCGGGCGTCGACGAAGGCG CGCAGCACGCGAGCGGTGAGGAAGGCGAGCCGTCGCCACCGGCGGGAGGTCGCCGGAGCCTCGC CACATCTTTCCGGCCGCTTCCGTGCCGGCCTCGCACCATCCCGGCTGCGCCCAGCCGCGCCATG CGCGCTGCCTCTGCCCGGCTGGAGGTTGAAGACGACCTCCCTCAGCCGAGCCGATGACAGGATG GGCCCACCTCCTGTTTTTCC |