Plant Circular RNA Database

Detail information of AT3G17360_circ_g.2

			
						 General Information
					
						CircRNA Name
						AT3G17360_circ_g.2
					
						ID in PlantcircBase
						ath_circ_022382
					
						Alias
						NA
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr3: 5940805-5944236  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, PcircRNA_finder
					
						Parent gene
						
							AT3G17360						
					
						Parent gene annotation
						
							Phragmoplast orienting kinesin 1
							
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						3
					
						Tissues
						whole_plant
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT3G17360.1:6
AT3G17360.3:6
AT3G17360.2:6

General Information
CircRNA Name	AT3G17360_circ_g.2
ID in PlantcircBase	ath_circ_022382
Alias	NA
Organism	Arabidpsis thaliana
Position	chr3: 5940805-5944236 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	CIRCexplorer, PcircRNA_finder
Parent gene	AT3G17360
Parent gene annotation	Phragmoplast orienting kinesin 1
Parent gene strand	+
Alternative splicing	NA
Support reads	3
Tissues	whole_plant
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT3G17360.1:6 AT3G17360.3:6 AT3G17360.2:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ACTTTGGTAAAAATAAATGTAAAATAGGTCGACAGGGCTGCAAGGTGCGCATAGTCAGATACAA
GTCCTACAGAAGGAAGTAGCAGAACAAACCAAAGAGgcagaaacaatgccaactataagtgaaa
tccaagaggaggtggctatttcacatagtaaaaactatgatagaggtgcactagtgaagacaga
tgagggga

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GCAGAAACAATGCCAACTATAAGTGAAATCCAAGAGGAGGTGGCTATTTCACATAGTAAAAACT
ATGATAGAGGTGCACTAGTGAAGACAGATGAGGGGATAGACCGGTCAATCCTGCAGTTCAAGTT
AGGGAAGTTAATGAAGGACCTCGAGGAGGCCAGAACACTCAATTGTAAATATGAAAAAGATCAT
AAGTCGCAGTTATCTCAACAAGAAGACATTGAAGTAGTCCGTGAGCAAGTCGAGACAGAAACTG
CTAGAACCATTCTTGAGTTGCAGGAAGAGGTGATTGCTCTCCAGTCTGAATTTCAAAGAAGAAT
CTGTAACTTGACCGAGGAAAATCAGTCGATAAAAGATACTATAACTGCTAGAGAGTCAGAAATA
AGAGCACTTAACCAAGACTGGGAAAAGGCTACCTTAGAACTGACTAATTTCATCGTCGCTGGGT
CCAAATCCATCAAAAATGCCTCTACACAGATTGAAAGTATCATCTGTTCATTTCCACAAGTGAA
TGCGTGGATAGGTGATTATGTTGAGAAGGCTGCAAAAAATTGTATAAAAAAGGAAGAAACAATT
TTACTTCTACAGAAAAGCTTGGAAGATGCAAGGATATTAGTAGCAGAGATGAATTTGAAGCTGA
ATTCTTTAAAGGGCGCAACAATTGCTCTCAACGAATTTCAACTGGGTGGCAATGCTGCAACGAC
TGAAGAGGCTTTCAACTTGAATAATGATGTAGACAGGATGAGCGATGAGGTAGACACGCTTGAG
AGTAACTTTAAAGCAAATCAATATTCTATTCTGAAAACAGAACGACATGCCGAAGCTGCTTTAG
CTGTTACAAAATGGCTTTCTGATTCTAGAGATCAACACCAAATGATGGAAAAAGTACAAGATCA
ATCAGTTAAAGAATTTGGTACATTAAGTTCAATCTCTGCTTCTCTTAGTGCGGAAGGGAATGCT
GATATTAGTTTGTCAAGGGATGGACATCTAAGTGACGCAACATATCCAAAGGGTGATGAGCTTT
CAACATCAAGCTCTGACTTTTCAAACTGTAGATGGCAACATGATTGTGCACTGAACGTAAAGTG
TCAAGGAGTTTCAAGTTCTGAATCTGACGCTCAAGAAAGTAATAACAAGATTACATCAGCAGCT
TTAATTGCTAAGAATGGTTCTGCACATTCTGTTTACTGTGGAGGTATACTTTTGCTTGTTTTCT
CTTATTCACCATCCTAAATTTAAGATCTGAAACGAGTAATCTTGAATGACTAAACCACCAGTTT
TATTTTATATGTAAATAAAGAAGCTACAGATTTTGTTTCATGCAGAGGGGAGGCAGTCAGTTGA
GAAGCCATTGACCATTATGATGGGGAGAGAAGAAACAGAATACAAATGCAGTAAACCGGTAAGC
TTTTATTAGCATCGTTTCATTTTGTGAAGGTATATAAAGAAATTGGTTACATGTCAGTGACAAA
GTAAACCACTGAACTTATATCTATGCAGCTTTCTTCTGGGGTATATATGGGTCTTATGCAGAGA
ATGGATCCTGTTAGAACTTTCTTCGATCGATTTGAGGAAGTCAATGCTACCATGAAAGAAGCTG
ATCTCACAATATGTGAATTAGTAAAGGCCAATGAAAAATCAAATAGTGTTACTGAAATGTGGCT
TCAAACCCATGAAGAGTTAATAAGTAAGGAAAAAAATTTGATGGATGATCTTGAACAGGTCAAG
TCTATACTATCTGCTTGTGAAGAAGAAAAACAAGTCTTGCTAAATCAAACACACACCACTTTGG
CGGACATGGAAAATTCAGTGTCTTTGCTTGAAGAATATTTTCAGGAAATGAAAAGAGGAGTAGA
AGAAACAGTAGAGGCTTTGTTTTCCCATGCCCGTTTAGCTGGAAAAGAGCTTCTCCAATTGATT
TCCAACTCAAGACCATCACTTGAACAGATTGCATCTGAATTCATGGAGAGAGAGTTCACCATGT
ATGCAACATACCAATGCCACATTGGGAAACTGATCGATCAAATTTTGGATCAGAGAAAACAGGT
TATCACTCCCAACCTTTCAGGCCAAGAAACCAATCAGTCAGTGAAGATTAATGCCATTGGGTAT
AATGCCGAAGATGAAGTCACTAAAAAGCAAAGCAGAGAAGAGATTGTCACAGGCTTAGAAAATG
ATGAAGTTGTTCAGTCACATGAAAGCCTATTATATGAGAACTTGTATCTGAAAAAGGAGCTTGA
GAGAAAAGAAGCTTTGTTTGAAGGCTTGCTTTTTGATTTTAGGCTACTTCAGGAATCAGCATCA
AATAAAAGAGATATCAAGAATGAAATGGATGAGCTGTTTGACGCATTATGCAAAGTACAGCTAG
AGCTGGAACTGAAAGCAAGTCAAGTTCATGAGCTTTTTGTTCATAACGAGAATCTTGAAAATTG
CTCCATTGACTTGAAAACGGCGTTGTTCACGTCACAGTCAGATCTAGAGCAGGCTAAACAGAGG
ATACAAATTCTTGCGGAGCAGAATGATGAGTTAAGGGCCCTTGTTAGTGATCTCTGTAAGGAAA
AGGCTGCAGCTGAGGAGGGATTGGACGAACAAAGGGATCTTGTCAATAGGTTGGAAAAAGAAAT
CCTTCACTTGACTACTACAGCAGAGAAGCAATTGCTTTCTGCGGTCAAGTCCATTAAAGAAAAT
TTGAAAAAGACCAGCGATGAGAAAGATCAGATTGTTGACGAAATATGTTCGTTAAATAATAAGC
TTGAGTTGGCCTATGCTATAGCTGATGAAAAAGAAGCAATTGCCGTAGAGGCTCATCAGGTATG
TAACTTGGAGCCTTTTGTTTCTAGATGAATCATTTGATCCTTAGCAATATTGAAGAGTTGACAA
GAATCTAAACTTGTTCTCATGTAGGAATCTGAAGCAAGTAAAATATATGCTGAACAAAAGGAAG
AGGAGGTCAAGATTCTAGAAATTTCTGTTGAGGAACTTGAGCGTACGATAAATATATTAGAAAG
ACGGGTTCGTTTGCTTTCTTTTTCATTCTCTATATCTGATAGGTATTGCATGAAACTCTTATAC
CTACTAATATGTGAGCTATTTTGGCTTCCAGGTGTATGATATGGATGAAGAAGTAAAAAGGCAT
CGTACCACCCAAGATTCGTTAGAGACAGAGCTGCAAGCTCTCAGACAGAGATTGTTTCGATTTG
AAAACTTCACTGGCACTATGGTCACAACCAATGAAAGCACAGAGGAATATAAGAGTCACATATC
CAGGTCAGCCAACCTAAATCCTACTCAAAATATTAGTTTCTCTTGCATATCTTTCTTGGTGAAG
ACTGACTTTGGTAAAAATAAATGTAAAATAGGTCGACAGGGCTGCAAGGTGCGCATAGTCAGAT
ACAAGTCCTACAGAAGGAAGTAGCAGAACAAACCAAAGAG
						
					

			
		

Sequences
Splice junction sequence	ACTTTGGTAAAAATAAATGTAAAATAGGTCGACAGGGCTGCAAGGTGCGCATAGTCAGATACAA GTCCTACAGAAGGAAGTAGCAGAACAAACCAAAGAGgcagaaacaatgccaactataagtgaaa tccaagaggaggtggctatttcacatagtaaaaactatgatagaggtgcactagtgaagacaga tgagggga
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GCAGAAACAATGCCAACTATAAGTGAAATCCAAGAGGAGGTGGCTATTTCACATAGTAAAAACT ATGATAGAGGTGCACTAGTGAAGACAGATGAGGGGATAGACCGGTCAATCCTGCAGTTCAAGTT AGGGAAGTTAATGAAGGACCTCGAGGAGGCCAGAACACTCAATTGTAAATATGAAAAAGATCAT AAGTCGCAGTTATCTCAACAAGAAGACATTGAAGTAGTCCGTGAGCAAGTCGAGACAGAAACTG CTAGAACCATTCTTGAGTTGCAGGAAGAGGTGATTGCTCTCCAGTCTGAATTTCAAAGAAGAAT CTGTAACTTGACCGAGGAAAATCAGTCGATAAAAGATACTATAACTGCTAGAGAGTCAGAAATA AGAGCACTTAACCAAGACTGGGAAAAGGCTACCTTAGAACTGACTAATTTCATCGTCGCTGGGT CCAAATCCATCAAAAATGCCTCTACACAGATTGAAAGTATCATCTGTTCATTTCCACAAGTGAA TGCGTGGATAGGTGATTATGTTGAGAAGGCTGCAAAAAATTGTATAAAAAAGGAAGAAACAATT TTACTTCTACAGAAAAGCTTGGAAGATGCAAGGATATTAGTAGCAGAGATGAATTTGAAGCTGA ATTCTTTAAAGGGCGCAACAATTGCTCTCAACGAATTTCAACTGGGTGGCAATGCTGCAACGAC TGAAGAGGCTTTCAACTTGAATAATGATGTAGACAGGATGAGCGATGAGGTAGACACGCTTGAG AGTAACTTTAAAGCAAATCAATATTCTATTCTGAAAACAGAACGACATGCCGAAGCTGCTTTAG CTGTTACAAAATGGCTTTCTGATTCTAGAGATCAACACCAAATGATGGAAAAAGTACAAGATCA ATCAGTTAAAGAATTTGGTACATTAAGTTCAATCTCTGCTTCTCTTAGTGCGGAAGGGAATGCT GATATTAGTTTGTCAAGGGATGGACATCTAAGTGACGCAACATATCCAAAGGGTGATGAGCTTT CAACATCAAGCTCTGACTTTTCAAACTGTAGATGGCAACATGATTGTGCACTGAACGTAAAGTG TCAAGGAGTTTCAAGTTCTGAATCTGACGCTCAAGAAAGTAATAACAAGATTACATCAGCAGCT TTAATTGCTAAGAATGGTTCTGCACATTCTGTTTACTGTGGAGGTATACTTTTGCTTGTTTTCT CTTATTCACCATCCTAAATTTAAGATCTGAAACGAGTAATCTTGAATGACTAAACCACCAGTTT TATTTTATATGTAAATAAAGAAGCTACAGATTTTGTTTCATGCAGAGGGGAGGCAGTCAGTTGA GAAGCCATTGACCATTATGATGGGGAGAGAAGAAACAGAATACAAATGCAGTAAACCGGTAAGC TTTTATTAGCATCGTTTCATTTTGTGAAGGTATATAAAGAAATTGGTTACATGTCAGTGACAAA GTAAACCACTGAACTTATATCTATGCAGCTTTCTTCTGGGGTATATATGGGTCTTATGCAGAGA ATGGATCCTGTTAGAACTTTCTTCGATCGATTTGAGGAAGTCAATGCTACCATGAAAGAAGCTG ATCTCACAATATGTGAATTAGTAAAGGCCAATGAAAAATCAAATAGTGTTACTGAAATGTGGCT TCAAACCCATGAAGAGTTAATAAGTAAGGAAAAAAATTTGATGGATGATCTTGAACAGGTCAAG TCTATACTATCTGCTTGTGAAGAAGAAAAACAAGTCTTGCTAAATCAAACACACACCACTTTGG CGGACATGGAAAATTCAGTGTCTTTGCTTGAAGAATATTTTCAGGAAATGAAAAGAGGAGTAGA AGAAACAGTAGAGGCTTTGTTTTCCCATGCCCGTTTAGCTGGAAAAGAGCTTCTCCAATTGATT TCCAACTCAAGACCATCACTTGAACAGATTGCATCTGAATTCATGGAGAGAGAGTTCACCATGT ATGCAACATACCAATGCCACATTGGGAAACTGATCGATCAAATTTTGGATCAGAGAAAACAGGT TATCACTCCCAACCTTTCAGGCCAAGAAACCAATCAGTCAGTGAAGATTAATGCCATTGGGTAT AATGCCGAAGATGAAGTCACTAAAAAGCAAAGCAGAGAAGAGATTGTCACAGGCTTAGAAAATG ATGAAGTTGTTCAGTCACATGAAAGCCTATTATATGAGAACTTGTATCTGAAAAAGGAGCTTGA GAGAAAAGAAGCTTTGTTTGAAGGCTTGCTTTTTGATTTTAGGCTACTTCAGGAATCAGCATCA AATAAAAGAGATATCAAGAATGAAATGGATGAGCTGTTTGACGCATTATGCAAAGTACAGCTAG AGCTGGAACTGAAAGCAAGTCAAGTTCATGAGCTTTTTGTTCATAACGAGAATCTTGAAAATTG CTCCATTGACTTGAAAACGGCGTTGTTCACGTCACAGTCAGATCTAGAGCAGGCTAAACAGAGG ATACAAATTCTTGCGGAGCAGAATGATGAGTTAAGGGCCCTTGTTAGTGATCTCTGTAAGGAAA AGGCTGCAGCTGAGGAGGGATTGGACGAACAAAGGGATCTTGTCAATAGGTTGGAAAAAGAAAT CCTTCACTTGACTACTACAGCAGAGAAGCAATTGCTTTCTGCGGTCAAGTCCATTAAAGAAAAT TTGAAAAAGACCAGCGATGAGAAAGATCAGATTGTTGACGAAATATGTTCGTTAAATAATAAGC TTGAGTTGGCCTATGCTATAGCTGATGAAAAAGAAGCAATTGCCGTAGAGGCTCATCAGGTATG TAACTTGGAGCCTTTTGTTTCTAGATGAATCATTTGATCCTTAGCAATATTGAAGAGTTGACAA GAATCTAAACTTGTTCTCATGTAGGAATCTGAAGCAAGTAAAATATATGCTGAACAAAAGGAAG AGGAGGTCAAGATTCTAGAAATTTCTGTTGAGGAACTTGAGCGTACGATAAATATATTAGAAAG ACGGGTTCGTTTGCTTTCTTTTTCATTCTCTATATCTGATAGGTATTGCATGAAACTCTTATAC CTACTAATATGTGAGCTATTTTGGCTTCCAGGTGTATGATATGGATGAAGAAGTAAAAAGGCAT CGTACCACCCAAGATTCGTTAGAGACAGAGCTGCAAGCTCTCAGACAGAGATTGTTTCGATTTG AAAACTTCACTGGCACTATGGTCACAACCAATGAAAGCACAGAGGAATATAAGAGTCACATATC CAGGTCAGCCAACCTAAATCCTACTCAAAATATTAGTTTCTCTTGCATATCTTTCTTGGTGAAG ACTGACTTTGGTAAAAATAAATGTAAAATAGGTCGACAGGGCTGCAAGGTGCGCATAGTCAGAT ACAAGTCCTACAGAAGGAAGTAGCAGAACAAACCAAAGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.158316494

Conservation Information
Conserved circRNAs	NA
PMCS	0.158316494

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							5940814-5944233(+)
						
					

						Potential amino acid sequence
						
							MPTISEIQEEVAISHSKNYDRGALVKTDEGIDRSILQFKLGKLMKDLEEARTLNCKYEKDHKSQ
LSQQEDIEVVREQVETETARTILELQEEVIALQSEFQRRICNLTEENQSIKDTITARESEIRAL
NQDWEKATLELTNFIVAGSKSIKNASTQIESIICSFPQVNAWIGDYVEKAAKNCIKKEETILLL
QKSLEDARILVAEMNLKLNSLKGATIALNEFQLGGNAATTEEAFNLNNDVDRMSDEVDTLESNF
KANQYSILKTERHAEAALAVTKWLSDSRDQHQMMEKVQDQSVKEFGTLSSISASLSAEGNADIS
LSRDGHLSDATYPKGDELSTSSSDFSNCRWQHDCALNVKCQGVSSSESDAQESNNKITSAALIA
KNGSAHSVYCGEGRQSVEKPLTIMMGREETEYKCSKPLSSGVYMGLMQRMDPVRTFFDRFEEVN
ATMKEADLTICELVKANEKSNSVTEMWLQTHEELISKEKNLMDDLEQVKSILSACEEEKQVLLN
QTHTTLADMENSVSLLEEYFQEMKRGVEETVEALFSHARLAGKELLQLISNSRPSLEQIASEFM
EREFTMYATYQCHIGKLIDQILDQRKQVITPNLSGQETNQSVKINAIGYNAEDEVTKKQSREEI
VTGLENDEVVQSHESLLYENLYLKKELERKEALFEGLLFDFRLLQESASNKRDIKNEMDELFDA
LCKVQLELELKASQVHELFVHNENLENCSIDLKTALFTSQSDLEQAKQRIQILAEQNDELRALV
SDLCKEKAAAEEGLDEQRDLVNRLEKEILHLTTTAEKQLLSAVKSIKENLKKTSDEKDQIVDEI
CSLNNKLELAYAIADEKEAIAVEAHQESEASKIYAEQKEEEVKILEISVEELERTINILERRVY
DMDEEVKRHRTTQDSLETELQALRQRLFRFENFTGTMVTTNESTEEYKSHISRSTGLQGAHSQI
QVLQKEVAEQTKEAETMPTISEIQEEVAISHSKNYDRGALVKTDEGIDRSILQFKLGKLMKDLE
EARTLNCKYEKDHKSQLSQQEDIEVVREQVETETARTILELQEEVIALQSEFQRRICNLTEENQ
SIKDTITARESEIRALNQDWEKATLELTNFIVAGSKSIKNASTQIESIICSFPQVNAWIGDYVE
KAAKNCIKKEETILLLQKSLEDARILVAEMNLKLNSLKGATIALNEFQLGGNAATTEEAFNLNN
DVDRMSDEVDTLESNFKANQYSILKTERHAEAALAVTKWLSDSRDQHQMMEKVQDQSVKEFGTL
SSISASLSAEGNADISLSRDGHLSDATYPKGDELSTSSSDFSNCRWQHDCALNVKCQGVSSSES
DAQESNNKITSAALIAKNGSAHSVYCGEGRQSVEKPLTIMMGREETEYKCSKPLSSGVYMGLMQ
RMDPVRTFFDRFEEVNATMKEADLTICELVKANEKSNSVTEMWLQTHEELISKEKNLMDDLEQV
KSILSACEEEKQVLLNQTHTTLADMENSVSLLEEYFQEMKRGVEETVEALFSHARLAGKELLQL
ISNSRPSLEQIASEFMEREFTMYATYQCHIGKLIDQILDQRKQVITPNLSGQETNQSVKINAIG
YNAEDEVTKKQSREEIVTGLENDEVVQSHESLLYENLYLKKELERKEALFEGLLFDFRLLQESA
SNKRDIKNEMDELFDALCKVQLELELKASQVHELFVHNENLENCSIDLKTALFTSQSDLEQAKQ
RIQILAEQNDELRALVSDLCKEKAAAEEGLDEQRDLVNRLEKEILHLTTTAEKQLLSAVKSIKE
NLKKTSDEKDQIVDEICSLNNKLELAYAIADEKEAIAVEAHQESEASKIYAEQKEEEVKILEIS
VEELERTINILERRVYDMDEEVKRHRTTQDSLETELQALRQRLFRFENFTGTMVTTNESTEEYK
SHISRSTGLQGAHSQIQVLQKEVAEQTKEAETMPTISEIQEEVAISHSKNYDRGALVKTDEGID
RSILQFKLGKLMKDLEEARTLNCKYEKDHKSQLSQQEDIEVVREQVETETARTILELQEEVIAL
QSEFQRRICNLTEENQSIKDTITARESEIRALNQDWEKATLELTNFIVAGSKSIKNASTQIESI
ICSFPQVNAWIGDYVEKAAKNCIKKEETILLLQKSLEDARILVAEMNLKLNSLKGATIALNEFQ
LGGNAATTEEAFNLNNDVDRMSDEVDTLESNFKANQYSILKTERHAEAALAVTKWLSDSRDQHQ
MMEKVQDQSVKEFGTLSSISASLSAEGNADISLSRDGHLSDATYPKGDELSTSSSDFSNCRWQH
DCALNVKCQGVSSSESDAQESNNKITSAALIAKNGSAHSVYCGEGRQSVEKPLTIMMGREETEY
KCSKPLSSGVYMGLMQRMDPVRTFFDRFEEVNATMKEADLTICELVKANEKSNSVTEMWLQTHE
ELISKEKNLMDDLEQVKSILSACEEEKQVLLNQTHTTLADMENSVSLLEEYFQEMKRGVEETVE
ALFSHARLAGKELLQLISNSRPSLEQIASEFMEREFTMYATYQCHIGKLIDQILDQRKQVITPN
LSGQETNQSVKINAIGYNAEDEVTKKQSREEIVTGLENDEVVQSHESLLYENLYLKKELERKEA
LFEGLLFDFRLLQESASNKRDIKNEMDELFDALCKVQLELELKASQVHELFVHNENLENCSIDL
KTALFTSQSDLEQAKQRIQILAEQNDELRALVSDLCKEKAAAEEGLDEQRDLVNRLEKEILHLT
TTAEKQLLSAVKSIKENLKKTSDEKDQIVDEICSLNNKLELAYAIADEKEAIAVEAHQESEASK
IYAEQKEEEVKILEISVEELERTINILERRVYDMDEEVKRHRTTQDSLETELQALRQRLFRFEN
FTGTMVTTNESTEEYKSHISRSTGLQGAHSQIQVLQKEVAEQTKEAETMPTISEIQEEVAISHS
KNYDRGALVKTDEGIDRSILQFKLGKLMKDLEEARTLNCKYEKDHKSQLSQQEDIEVVREQVET
ETARTILELQEEVIALQSEFQRRICNLTEENQSIKDTITARESEIRALNQDWEKATLELTNFIV
AGSKSIKNASTQIESIICSFPQVNAWIGDYVEKAAKNCIKKEETILLLQKSLEDARILVAEMNL
KLNSLKGATIALNEFQLGGNAATTEEAFNLNNDVDRMSDEVDTLESNFKANQYSILKTERHAEA
ALAVTKWLSDSRDQHQMMEKVQDQSVKEFGTLSSISASLSAEGNADISLSRDGHLSDATYPKGD
ELSTSSSDFSNCRWQHDCALNVKCQGVSSSESDAQESNNKITSAALIAKNGSAHSVYCGEGRQS
VEKPLTIMMGREETEYKCSKPLSSGVYMGLMQRMDPVRTFFDRFEEVNATMKEADLTICELVKA
NEKSNSVTEMWLQTHEELISKEKNLMDDLEQVKSILSACEEEKQVLLNQTHTTLADMENSVSLL
EEYFQEMKRGVEETVEALFSHARLAGKELLQLISNSRPSLEQIASEFMEREFTMYATYQCHIGK
LIDQILDQRKQVITPNLSGQETNQSVKINAIGYNAEDEVTKKQSREEIVTGLENDEVVQSHESL
LYENLYLKKELERKEALFEGLLFDFRLLQESASNKRDIKNEMDELFDALCKVQLELELKASQVH
ELFVHNENLENCSIDLKTALFTSQSDLEQAKQRIQILAEQNDELRALVSDLCKEKAAAEEGLDE
QRDLVNRLEKEILHLTTTAEKQLLSAVKSIKENLKKTSDEKDQIVDEICSLNNKLELAYAIADE
KEAIAVEAHQESEASKIYAEQKEEEVKILEISVEELERTINILERRVYDMDEEVKRHRTTQDSL
ETELQALRQRLFRFENFTGTMVTTNESTEEYKSHISRSTGLQGAHSQIQVLQKEVAEQTKE(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	5940814-5944233(+)
Potential amino acid sequence	MPTISEIQEEVAISHSKNYDRGALVKTDEGIDRSILQFKLGKLMKDLEEARTLNCKYEKDHKSQ LSQQEDIEVVREQVETETARTILELQEEVIALQSEFQRRICNLTEENQSIKDTITARESEIRAL NQDWEKATLELTNFIVAGSKSIKNASTQIESIICSFPQVNAWIGDYVEKAAKNCIKKEETILLL QKSLEDARILVAEMNLKLNSLKGATIALNEFQLGGNAATTEEAFNLNNDVDRMSDEVDTLESNF KANQYSILKTERHAEAALAVTKWLSDSRDQHQMMEKVQDQSVKEFGTLSSISASLSAEGNADIS LSRDGHLSDATYPKGDELSTSSSDFSNCRWQHDCALNVKCQGVSSSESDAQESNNKITSAALIA KNGSAHSVYCGEGRQSVEKPLTIMMGREETEYKCSKPLSSGVYMGLMQRMDPVRTFFDRFEEVN ATMKEADLTICELVKANEKSNSVTEMWLQTHEELISKEKNLMDDLEQVKSILSACEEEKQVLLN QTHTTLADMENSVSLLEEYFQEMKRGVEETVEALFSHARLAGKELLQLISNSRPSLEQIASEFM EREFTMYATYQCHIGKLIDQILDQRKQVITPNLSGQETNQSVKINAIGYNAEDEVTKKQSREEI VTGLENDEVVQSHESLLYENLYLKKELERKEALFEGLLFDFRLLQESASNKRDIKNEMDELFDA LCKVQLELELKASQVHELFVHNENLENCSIDLKTALFTSQSDLEQAKQRIQILAEQNDELRALV SDLCKEKAAAEEGLDEQRDLVNRLEKEILHLTTTAEKQLLSAVKSIKENLKKTSDEKDQIVDEI CSLNNKLELAYAIADEKEAIAVEAHQESEASKIYAEQKEEEVKILEISVEELERTINILERRVY DMDEEVKRHRTTQDSLETELQALRQRLFRFENFTGTMVTTNESTEEYKSHISRSTGLQGAHSQI QVLQKEVAEQTKEAETMPTISEIQEEVAISHSKNYDRGALVKTDEGIDRSILQFKLGKLMKDLE EARTLNCKYEKDHKSQLSQQEDIEVVREQVETETARTILELQEEVIALQSEFQRRICNLTEENQ SIKDTITARESEIRALNQDWEKATLELTNFIVAGSKSIKNASTQIESIICSFPQVNAWIGDYVE KAAKNCIKKEETILLLQKSLEDARILVAEMNLKLNSLKGATIALNEFQLGGNAATTEEAFNLNN DVDRMSDEVDTLESNFKANQYSILKTERHAEAALAVTKWLSDSRDQHQMMEKVQDQSVKEFGTL SSISASLSAEGNADISLSRDGHLSDATYPKGDELSTSSSDFSNCRWQHDCALNVKCQGVSSSES DAQESNNKITSAALIAKNGSAHSVYCGEGRQSVEKPLTIMMGREETEYKCSKPLSSGVYMGLMQ RMDPVRTFFDRFEEVNATMKEADLTICELVKANEKSNSVTEMWLQTHEELISKEKNLMDDLEQV KSILSACEEEKQVLLNQTHTTLADMENSVSLLEEYFQEMKRGVEETVEALFSHARLAGKELLQL ISNSRPSLEQIASEFMEREFTMYATYQCHIGKLIDQILDQRKQVITPNLSGQETNQSVKINAIG YNAEDEVTKKQSREEIVTGLENDEVVQSHESLLYENLYLKKELERKEALFEGLLFDFRLLQESA SNKRDIKNEMDELFDALCKVQLELELKASQVHELFVHNENLENCSIDLKTALFTSQSDLEQAKQ RIQILAEQNDELRALVSDLCKEKAAAEEGLDEQRDLVNRLEKEILHLTTTAEKQLLSAVKSIKE NLKKTSDEKDQIVDEICSLNNKLELAYAIADEKEAIAVEAHQESEASKIYAEQKEEEVKILEIS VEELERTINILERRVYDMDEEVKRHRTTQDSLETELQALRQRLFRFENFTGTMVTTNESTEEYK SHISRSTGLQGAHSQIQVLQKEVAEQTKEAETMPTISEIQEEVAISHSKNYDRGALVKTDEGID RSILQFKLGKLMKDLEEARTLNCKYEKDHKSQLSQQEDIEVVREQVETETARTILELQEEVIAL QSEFQRRICNLTEENQSIKDTITARESEIRALNQDWEKATLELTNFIVAGSKSIKNASTQIESI ICSFPQVNAWIGDYVEKAAKNCIKKEETILLLQKSLEDARILVAEMNLKLNSLKGATIALNEFQ LGGNAATTEEAFNLNNDVDRMSDEVDTLESNFKANQYSILKTERHAEAALAVTKWLSDSRDQHQ MMEKVQDQSVKEFGTLSSISASLSAEGNADISLSRDGHLSDATYPKGDELSTSSSDFSNCRWQH DCALNVKCQGVSSSESDAQESNNKITSAALIAKNGSAHSVYCGEGRQSVEKPLTIMMGREETEY KCSKPLSSGVYMGLMQRMDPVRTFFDRFEEVNATMKEADLTICELVKANEKSNSVTEMWLQTHE ELISKEKNLMDDLEQVKSILSACEEEKQVLLNQTHTTLADMENSVSLLEEYFQEMKRGVEETVE ALFSHARLAGKELLQLISNSRPSLEQIASEFMEREFTMYATYQCHIGKLIDQILDQRKQVITPN LSGQETNQSVKINAIGYNAEDEVTKKQSREEIVTGLENDEVVQSHESLLYENLYLKKELERKEA LFEGLLFDFRLLQESASNKRDIKNEMDELFDALCKVQLELELKASQVHELFVHNENLENCSIDL KTALFTSQSDLEQAKQRIQILAEQNDELRALVSDLCKEKAAAEEGLDEQRDLVNRLEKEILHLT TTAEKQLLSAVKSIKENLKKTSDEKDQIVDEICSLNNKLELAYAIADEKEAIAVEAHQESEASK IYAEQKEEEVKILEISVEELERTINILERRVYDMDEEVKRHRTTQDSLETELQALRQRLFRFEN FTGTMVTTNESTEEYKSHISRSTGLQGAHSQIQVLQKEVAEQTKEAETMPTISEIQEEVAISHS KNYDRGALVKTDEGIDRSILQFKLGKLMKDLEEARTLNCKYEKDHKSQLSQQEDIEVVREQVET ETARTILELQEEVIALQSEFQRRICNLTEENQSIKDTITARESEIRALNQDWEKATLELTNFIV AGSKSIKNASTQIESIICSFPQVNAWIGDYVEKAAKNCIKKEETILLLQKSLEDARILVAEMNL KLNSLKGATIALNEFQLGGNAATTEEAFNLNNDVDRMSDEVDTLESNFKANQYSILKTERHAEA ALAVTKWLSDSRDQHQMMEKVQDQSVKEFGTLSSISASLSAEGNADISLSRDGHLSDATYPKGD ELSTSSSDFSNCRWQHDCALNVKCQGVSSSESDAQESNNKITSAALIAKNGSAHSVYCGEGRQS VEKPLTIMMGREETEYKCSKPLSSGVYMGLMQRMDPVRTFFDRFEEVNATMKEADLTICELVKA NEKSNSVTEMWLQTHEELISKEKNLMDDLEQVKSILSACEEEKQVLLNQTHTTLADMENSVSLL EEYFQEMKRGVEETVEALFSHARLAGKELLQLISNSRPSLEQIASEFMEREFTMYATYQCHIGK LIDQILDQRKQVITPNLSGQETNQSVKINAIGYNAEDEVTKKQSREEIVTGLENDEVVQSHESL LYENLYLKKELERKEALFEGLLFDFRLLQESASNKRDIKNEMDELFDALCKVQLELELKASQVH ELFVHNENLENCSIDLKTALFTSQSDLEQAKQRIQILAEQNDELRALVSDLCKEKAAAEEGLDE QRDLVNRLEKEILHLTTTAEKQLLSAVKSIKENLKKTSDEKDQIVDEICSLNNKLELAYAIADE KEAIAVEAHQESEASKIYAEQKEEEVKILEISVEELERTINILERRVYDMDEEVKRHRTTQDSL ETELQALRQRLFRFENFTGTMVTTNESTEEYKSHISRSTGLQGAHSQIQVLQKEVAEQTKE(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of AT3G17360_circ_g.2

Address

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