Plant Circular RNA Database

Detail information of POPTR_0002s20260_circ_g.1

			
						 General Information
					
						CircRNA Name
						POPTR_0002s20260_circ_g.1
					
						ID in PlantcircBase
						pop_circ_000800
					
						Alias
						Chr02:16260697-16264404
					
						Organism
						
							Populus trichocarpa						
					
						Position
						
							chr2: 16211448-16215155  JBrowse»						
					
						Reference genome
						
							Populus trichocarpa genome v3.0 						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							POPTR_0002s20260						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							POPTR_0002s20260_circ_g.2 						
					
						Support reads
						NA
					
						Tissues
						stem xylem
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						POPTR_0002s20260.1:4

General Information
CircRNA Name	POPTR_0002s20260_circ_g.1
ID in PlantcircBase	pop_circ_000800
Alias	Chr02:16260697-16264404
Organism	Populus trichocarpa
Position	chr2: 16211448-16215155 JBrowse»
Reference genome	Populus trichocarpa genome v3.0
Type	ue-circRNA
Identification method	CIRCexplorer
Parent gene	POPTR_0002s20260
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	POPTR_0002s20260_circ_g.2
Support reads	NA
Tissues	stem xylem
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	POPTR_0002s20260.1:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CACAAGATGTCCCACACCTTTTTACTAAATTTGCTCAGCCACAAAGTGGATCTAGTCGAAGTAA
TGGTGGTGCAGGACTTGGGCTTGCCATCTGCAAACGatttacctcggtattgatcggaaggatg
gagtcctgtgactgtatcgatatgcaatggccacatgaagaacttcttgttagatatcagtaca
tatcggat

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							ATTTACCTCGGTATTGATCGGAAGGATGGAGTCCTGTGACTGTATCGATATGCAATGGCCACAT
GAAGAACTTCTTGTTAGATATCAGTACATATCGGATGTTTTAATTGCCTTCGCATACTTCTCCA
TTCCCATCGAGCTAATATACTTTGTACAAAAATCAGCATTCTTTCCGTACAGATGGGTGCTTAT
GCAGTTTGGTGCCTTCATTGTTCTTTGTGGAGCGACCCACTTTATAAATCTGTGGACGTTCTCG
ATGCATTCAAAAGCTGTTGCTGTGGTGATGACTGTTGCAAAAGTTGCTTGTGCTATTGTATCAT
GTGCAACTGCTTTGATGCTTGTCCACATTATTCCTGATCTACTGAGTGTTAAAACCAGGGAATT
ATTTCTCAAGAACAAGGCTGAAGAACTTGATAGGGAGATGGGCCTTATTCTCACACAGGAAGAA
ACTGGAAGGCATGTTAGAATGCTGACTCATGAAATTAGAAGCACACTTGACCGACATACTATAT
TGAAAACCACTCTTGTTGAGCTGGGTAGGACCTTAGGCCTCGAGGAATGTGCGTTGTGGATGCC
TTCAAGAACTGGTTTGAATCTGCAACTTTCTCACACCCTGAACTACCAAATACAAGTGGGATCT
TCTGTACCTATAAACCTTCCTATAGTCAACGAAGTCTTCAGCAGTGCTCATGCAGTGCGTATAC
CATATAACTGCCCACTGGCTAGGATCAGGCCCCTTTTTGGTAGGTACCTGCCACCCGAGGTTGT
TGCTGTTCGTGTACCTCTTCTACATCTGTCAAATTTCCAAATTAATGATTGGCCTGAACTCTCT
GCAAAAAGCTATGCTGTCATGGTTTTGATTCTACCAACAGAAAGTGCTAGAAAGTGGCGAGACC
ATGAATTGGAACTTGTTGAAGTTGTTGCAGACCAGGTATTTTATGATTTAATTGCTCTCTTCCT
GCTTCTGTGTCATAGAAATGTTGGAATGTTCTTATTTAGTTGTTCCAATACTCATGCTGTATTT
ATTTTTTAGTTTTTCTATTTCATGCATCTTGTTTGCATATAAGCTTATGAAAATGATGAAATAG
CATGACCAGTGAAAAAGCTAGCATATAAAAATTCACATGCAGGCTTATCTATTATACACAAGGG
ATTGAAAATTTGCGTAGGCATGGGGTGTCTCATTGCTCAGTTCAATGTTTTGGTTTTGGCATTT
TACCTTGGAATGTGTAGTTCAGTCATGCTTCTTTGGTGTATATGTCCAATTAATAAGCTGCCTT
TCATTACTGCATATATATATATATATATATGAATGATTGGATTTTATAGATAAAAATACTGCAC
ATATTCATTCATAAATGCATTATATGCTGCAATTAAAAAACTAAAAAACCAATTGTTGGCACTT
CAGATTCTCTCATCTGCGCCTGCTACCCATCTGCTGTAATATGCTGTTATGTTGACCAGTGTTG
TCAAGAGGCGCTTGCCTAGGCGCTCCAGGCAAGGTGAGGCCCCAGCACCTTTATTAGCCTCAGG
TGTTGGATTTCAATGAGGCGCTGCCTAGGTGAGCGCCTTGTGAGTGGGTGCAAGGCGCTAAGGC
TAGCGCCTGCTTGAAGTTCTTCCTTTTCTGTTGGATTTTTCTTTTAATTTACCACAAGAAACAA
CTTAGGGGTATTTTTGTAAAAAACAAAGATTAGGGTAAAAAAATTAAAAAAATCATCAAAGAGG
GAGACAAACAGACAATGAAGGACACTTGGAAGAGAAACGCCAACCAACCTTTCTTTTTTCAACA
GTGGGAGTCAATGAACAACACATCTTTATAGTTAATACTTTAATTTTTTCTAAACAAGTGCAAT
ATAGTTTGAGAGATGAGGATTTCGATTATATGCATGAAATGGAGGATATGGAGGATTCAAGTGA
AGGAGAGGAAAGCATAGATGGAGATGTTTTTGAAGATTAATGAATAACTATGATGATACTTAAT
TTTTCTTTTTAATCTACTTGGCTACTTATTACTTTAAATTATCTTATTTTGTTTTAAGGGTGAA
AAATATAACTTTATATGACCATGTTATGGTATTTAATATTTTCCTTTGATTTTCTAATGATCTA
ATCTTAATTGGGAAGATGTATATTTTAGATTTATATAATATAATATAATATAATATATATTTTT
TAATTTATAACATATCGCCCTGGTTCATTCGGGCGAGCGGCTAGTGCCTCGGGCATTTTACAGG
CTTGGCGCCTTTTAGTGCCTTTTGCCTTTGACAACACTGATGTTGACCACTATCAGAATGATGA
TCAACATCACAATTGTCTGTTTTGGTGGTCATGTTTCATATTAGGCATTGCCTCATTATACCTT
TACATATGGTTCCTTGCATCAGATGTTCATAAGCAATACAATTTATGTGCCATAGTTTGAAACT
TAAACTACTACTCCAAGCATGTTGTTCAGTGTTGAAATCCCTTTTGACATTCATCAGGTAGCAG
TTGCTCTTTCGCATGCTGCTATTCTTGAAGAGTCTATGCGGGCACGTGATCAGCTCATGGAGCA
GAATGTTGCTTTAAAATCAGCTCGTCGAGAAGCAGAAATGGCAATACATGCTCGGAATGATTTC
CTTGCTGTCATGAACCATGAGATGAGGACACCAATGCATGCAATTATTGCATTGTCTTCACTTC
TTTTAGAGACTGGACTAACTACTGAACAAAGAGCAATGATTGAGACAGTATTGAAGAGTAGTAA
CCTCTTGGCAGTACTTACTAATGATGTGCTAGATCTTTCAAGACTTGAAGATGGAAGCTTAGAC
TTAGACCTTAAGACATTCAATCTTCATGAGCTTTTCAGAGAGGTGACTACCCCTAATTTTCTAC
TTTCATCATGCACTAATGGAATTCAATACAAGTTGGCACTGTGGCACTTCCATAGAGGCATTGT
GGTAACACTAATGGTTTTTTTTTCCTTCTGTAAACGCAGGTTGTTGGTTTGATAAAGCCCATTG
CATCTGTTAAAAAGTTATCTATGACTTTAATTATGGCCCCAGATTTGCCTGCATGTGCAGTTGG
TGATGAGAAACGGCTGACACAAACTATTCTGAATGTTGTGGGCAATGCTGTCAAGTTCACAAAG
GAGGGTTATGTGTCTATTGTTGTTTCTGTTGCAAAACCAGATTCTTTGAGAGACTGGCAGCCTC
CTGAATTCTACCCGATGACGAGTGATGGCCACTTCTATCTACGCGTGCAGGTTGTTGACTAGTA
CATTTAGGTTTTGCTCAGATAATTATAGAACAGTGTTCATTGGTGTTAATAATAGATAGCTAAC
CTTTTTAAGGTTAAAGGCATCTCTTGGTATCTAATAGACATGCAGTTTTGGCAGTTCAGGACAA
CCTTTTGGATTCTAGTATTTCAGATTGCTATGCTGTCTAACATGATTAGCTTGTATAAAATCTC
ACGGCCATCATCCATTCCTAAGTTGGATACTAACCAATGCAGCATTTTGTGCTTGCATCATCCT
TGTAGGTTGTTTGGAATATGATCTGCTTTGTTGTTAACCTTATCATGTTGGTTGTGACAGGTTA
AGGATTCTGGATGCGGTGTTCTCCCACAAGATGTCCCACACCTTTTTACTAAATTTGCTCAGCC
ACAAAGTGGATCTAGTCGAAGTAATGGTGGTGCAGGACTTGGGCTTGCCATCTGCAAACG
						
					

			
		

Sequences
Splice junction sequence	CACAAGATGTCCCACACCTTTTTACTAAATTTGCTCAGCCACAAAGTGGATCTAGTCGAAGTAA TGGTGGTGCAGGACTTGGGCTTGCCATCTGCAAACGatttacctcggtattgatcggaaggatg gagtcctgtgactgtatcgatatgcaatggccacatgaagaacttcttgttagatatcagtaca tatcggat
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	ATTTACCTCGGTATTGATCGGAAGGATGGAGTCCTGTGACTGTATCGATATGCAATGGCCACAT GAAGAACTTCTTGTTAGATATCAGTACATATCGGATGTTTTAATTGCCTTCGCATACTTCTCCA TTCCCATCGAGCTAATATACTTTGTACAAAAATCAGCATTCTTTCCGTACAGATGGGTGCTTAT GCAGTTTGGTGCCTTCATTGTTCTTTGTGGAGCGACCCACTTTATAAATCTGTGGACGTTCTCG ATGCATTCAAAAGCTGTTGCTGTGGTGATGACTGTTGCAAAAGTTGCTTGTGCTATTGTATCAT GTGCAACTGCTTTGATGCTTGTCCACATTATTCCTGATCTACTGAGTGTTAAAACCAGGGAATT ATTTCTCAAGAACAAGGCTGAAGAACTTGATAGGGAGATGGGCCTTATTCTCACACAGGAAGAA ACTGGAAGGCATGTTAGAATGCTGACTCATGAAATTAGAAGCACACTTGACCGACATACTATAT TGAAAACCACTCTTGTTGAGCTGGGTAGGACCTTAGGCCTCGAGGAATGTGCGTTGTGGATGCC TTCAAGAACTGGTTTGAATCTGCAACTTTCTCACACCCTGAACTACCAAATACAAGTGGGATCT TCTGTACCTATAAACCTTCCTATAGTCAACGAAGTCTTCAGCAGTGCTCATGCAGTGCGTATAC CATATAACTGCCCACTGGCTAGGATCAGGCCCCTTTTTGGTAGGTACCTGCCACCCGAGGTTGT TGCTGTTCGTGTACCTCTTCTACATCTGTCAAATTTCCAAATTAATGATTGGCCTGAACTCTCT GCAAAAAGCTATGCTGTCATGGTTTTGATTCTACCAACAGAAAGTGCTAGAAAGTGGCGAGACC ATGAATTGGAACTTGTTGAAGTTGTTGCAGACCAGGTATTTTATGATTTAATTGCTCTCTTCCT GCTTCTGTGTCATAGAAATGTTGGAATGTTCTTATTTAGTTGTTCCAATACTCATGCTGTATTT ATTTTTTAGTTTTTCTATTTCATGCATCTTGTTTGCATATAAGCTTATGAAAATGATGAAATAG CATGACCAGTGAAAAAGCTAGCATATAAAAATTCACATGCAGGCTTATCTATTATACACAAGGG ATTGAAAATTTGCGTAGGCATGGGGTGTCTCATTGCTCAGTTCAATGTTTTGGTTTTGGCATTT TACCTTGGAATGTGTAGTTCAGTCATGCTTCTTTGGTGTATATGTCCAATTAATAAGCTGCCTT TCATTACTGCATATATATATATATATATATGAATGATTGGATTTTATAGATAAAAATACTGCAC ATATTCATTCATAAATGCATTATATGCTGCAATTAAAAAACTAAAAAACCAATTGTTGGCACTT CAGATTCTCTCATCTGCGCCTGCTACCCATCTGCTGTAATATGCTGTTATGTTGACCAGTGTTG TCAAGAGGCGCTTGCCTAGGCGCTCCAGGCAAGGTGAGGCCCCAGCACCTTTATTAGCCTCAGG TGTTGGATTTCAATGAGGCGCTGCCTAGGTGAGCGCCTTGTGAGTGGGTGCAAGGCGCTAAGGC TAGCGCCTGCTTGAAGTTCTTCCTTTTCTGTTGGATTTTTCTTTTAATTTACCACAAGAAACAA CTTAGGGGTATTTTTGTAAAAAACAAAGATTAGGGTAAAAAAATTAAAAAAATCATCAAAGAGG GAGACAAACAGACAATGAAGGACACTTGGAAGAGAAACGCCAACCAACCTTTCTTTTTTCAACA GTGGGAGTCAATGAACAACACATCTTTATAGTTAATACTTTAATTTTTTCTAAACAAGTGCAAT ATAGTTTGAGAGATGAGGATTTCGATTATATGCATGAAATGGAGGATATGGAGGATTCAAGTGA AGGAGAGGAAAGCATAGATGGAGATGTTTTTGAAGATTAATGAATAACTATGATGATACTTAAT TTTTCTTTTTAATCTACTTGGCTACTTATTACTTTAAATTATCTTATTTTGTTTTAAGGGTGAA AAATATAACTTTATATGACCATGTTATGGTATTTAATATTTTCCTTTGATTTTCTAATGATCTA ATCTTAATTGGGAAGATGTATATTTTAGATTTATATAATATAATATAATATAATATATATTTTT TAATTTATAACATATCGCCCTGGTTCATTCGGGCGAGCGGCTAGTGCCTCGGGCATTTTACAGG CTTGGCGCCTTTTAGTGCCTTTTGCCTTTGACAACACTGATGTTGACCACTATCAGAATGATGA TCAACATCACAATTGTCTGTTTTGGTGGTCATGTTTCATATTAGGCATTGCCTCATTATACCTT TACATATGGTTCCTTGCATCAGATGTTCATAAGCAATACAATTTATGTGCCATAGTTTGAAACT TAAACTACTACTCCAAGCATGTTGTTCAGTGTTGAAATCCCTTTTGACATTCATCAGGTAGCAG TTGCTCTTTCGCATGCTGCTATTCTTGAAGAGTCTATGCGGGCACGTGATCAGCTCATGGAGCA GAATGTTGCTTTAAAATCAGCTCGTCGAGAAGCAGAAATGGCAATACATGCTCGGAATGATTTC CTTGCTGTCATGAACCATGAGATGAGGACACCAATGCATGCAATTATTGCATTGTCTTCACTTC TTTTAGAGACTGGACTAACTACTGAACAAAGAGCAATGATTGAGACAGTATTGAAGAGTAGTAA CCTCTTGGCAGTACTTACTAATGATGTGCTAGATCTTTCAAGACTTGAAGATGGAAGCTTAGAC TTAGACCTTAAGACATTCAATCTTCATGAGCTTTTCAGAGAGGTGACTACCCCTAATTTTCTAC TTTCATCATGCACTAATGGAATTCAATACAAGTTGGCACTGTGGCACTTCCATAGAGGCATTGT GGTAACACTAATGGTTTTTTTTTCCTTCTGTAAACGCAGGTTGTTGGTTTGATAAAGCCCATTG CATCTGTTAAAAAGTTATCTATGACTTTAATTATGGCCCCAGATTTGCCTGCATGTGCAGTTGG TGATGAGAAACGGCTGACACAAACTATTCTGAATGTTGTGGGCAATGCTGTCAAGTTCACAAAG GAGGGTTATGTGTCTATTGTTGTTTCTGTTGCAAAACCAGATTCTTTGAGAGACTGGCAGCCTC CTGAATTCTACCCGATGACGAGTGATGGCCACTTCTATCTACGCGTGCAGGTTGTTGACTAGTA CATTTAGGTTTTGCTCAGATAATTATAGAACAGTGTTCATTGGTGTTAATAATAGATAGCTAAC CTTTTTAAGGTTAAAGGCATCTCTTGGTATCTAATAGACATGCAGTTTTGGCAGTTCAGGACAA CCTTTTGGATTCTAGTATTTCAGATTGCTATGCTGTCTAACATGATTAGCTTGTATAAAATCTC ACGGCCATCATCCATTCCTAAGTTGGATACTAACCAATGCAGCATTTTGTGCTTGCATCATCCT TGTAGGTTGTTTGGAATATGATCTGCTTTGTTGTTAACCTTATCATGTTGGTTGTGACAGGTTA AGGATTCTGGATGCGGTGTTCTCCCACAAGATGTCCCACACCTTTTTACTAAATTTGCTCAGCC ACAAAGTGGATCTAGTCGAAGTAATGGTGGTGCAGGACTTGGGCTTGCCATCTGCAAACG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.161959183

Conservation Information
Conserved circRNAs	NA
PMCS	0.161959183

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							16211474-16215152(+)
16214673-16211461(+)
16211513-16214688(-)
						
					

						Potential amino acid sequence
						
							MESCDCIDMQWPHEELLVRYQYISDVLIAFAYFSIPIELIYFVQKSAFFPYRWVLMQFGAFIVL
CGATHFINLWTFSMHSKAVAVVMTVAKVACAIVSCATALMLVHIIPDLLSVKTRELFLKNKAEE
LDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRTGLNLQ
LSHTLNYQIQVGSSVPINLPIVNEVFSSAHAVRIPYNCPLARIRPLFGRYLPPEVVAVRVPLLH
LSNFQINDWPELSAKSYAVMVLILPTESARKWRDHELELVEVVADQVAVALSHAAILEESMRAR
DQLMEQNVALKSARREAEMAIHARNDFLAVMNHEMRTPMHAIIALSSLLLETGLTTEQRAMIET
VLKSSNLLAVLTNDVLDLSRLEDGSLDLDLKTFNLHELFREVVGLIKPIASVKKLSMTLIMAPD
LPACAVGDEKRLTQTILNVVGNAVKFTKEGYVSIVVSVAKPDSLRDWQPPEFYPMTSDGHFYLR
VQVKDSGCGVLPQDVPHLFTKFAQPQSGSSRSNGGAGLGLAICKRFTSVLIGRMESCDCIDMQW
PHEELLVRYQYISDVLIAFAYFSIPIELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHFINLWT
FSMHSKAVAVVMTVAKVACAIVSCATALMLVHIIPDLLSVKTRELFLKNKAEELDREMGLILTQ
EETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRTGLNLQLSHTLNYQIQV
GSSVPINLPIVNEVFSSAHAVRIPYNCPLARIRPLFGRYLPPEVVAVRVPLLHLSNFQINDWPE
LSAKSYAVMVLILPTESARKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALK
SARREAEMAIHARNDFLAVMNHEMRTPMHAIIALSSLLLETGLTTEQRAMIETVLKSSNLLAVL
TNDVLDLSRLEDGSLDLDLKTFNLHELFREVVGLIKPIASVKKLSMTLIMAPDLPACAVGDEKR
LTQTILNVVGNAVKFTKEGYVSIVVSVAKPDSLRDWQPPEFYPMTSDGHFYLRVQVKDSGCGVL
PQDVPHLFTKFAQPQSGSSRSNGGAGLGLAICKRFTSVLIGRMESCDCIDMQWPHEELLVRYQY
ISDVLIAFAYFSIPIELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHFINLWTFSMHSKAVAVV
MTVAKVACAIVSCATALMLVHIIPDLLSVKTRELFLKNKAEELDREMGLILTQEETGRHVRMLT
HEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRTGLNLQLSHTLNYQIQVGSSVPINLPIV
NEVFSSAHAVRIPYNCPLARIRPLFGRYLPPEVVAVRVPLLHLSNFQINDWPELSAKSYAVMVL
ILPTESARKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALKSARREAEMAIH
ARNDFLAVMNHEMRTPMHAIIALSSLLLETGLTTEQRAMIETVLKSSNLLAVLTNDVLDLSRLE
DGSLDLDLKTFNLHELFREVVGLIKPIASVKKLSMTLIMAPDLPACAVGDEKRLTQTILNVVGN
AVKFTKEGYVSIVVSVAKPDSLRDWQPPEFYPMTSDGHFYLRVQVKDSGCGVLPQDVPHLFTKF
AQPQSGSSRSNGGAGLGLAICKRFTSVLIGRMESCDCIDMQWPHEELLVRYQYISDVLIAFAYF
SIPIELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHFINLWTFSMHSKAVAVVMTVAKVACAIV
SCATALMLVHIIPDLLSVKTRELFLKNKAEELDREMGLILTQEETGRHVRMLTHEIRSTLDRHT
ILKTTLVELGRTLGLEECALWMPSRTGLNLQLSHTLNYQIQVGSSVPINLPIVNEVFSSAHAVR
IPYNCPLARIRPLFGRYLPPEVVAVRVPLLHLSNFQINDWPELSAKSYAVMVLILPTESARKWR
DHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALKSARREAEMAIHARNDFLAVMNH
EMRTPMHAIIALSSLLLETGLTTEQRAMIETVLKSSNLLAVLTNDVLDLSRLEDGSLDLDLKTF
NLHELFREVVGLIKPIASVKKLSMTLIMAPDLPACAVGDEKRLTQTILNVVGNAVKFTKEGYVS
IVVSVAKPDSLRDWQPPEFYPMTSDGHFYLRVQVKDSGCGVLPQDVPHLFTKFAQPQSGSSRSN
GGAGLGLAICK(+)
MATSIYACRLRILDAVFSHKMSHTFLLNLLSHKVDLVEVMVVQDLGLPSANDLPRY*(+)
MWPLHIDTVTGLHPSDQYRGKSFADGKPKSCTTITSTRSTLWLSKFSKKVWDILWENTASRILN
LHA*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	16211474-16215152(+) 16214673-16211461(+) 16211513-16214688(-)
Potential amino acid sequence	MESCDCIDMQWPHEELLVRYQYISDVLIAFAYFSIPIELIYFVQKSAFFPYRWVLMQFGAFIVL CGATHFINLWTFSMHSKAVAVVMTVAKVACAIVSCATALMLVHIIPDLLSVKTRELFLKNKAEE LDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRTGLNLQ LSHTLNYQIQVGSSVPINLPIVNEVFSSAHAVRIPYNCPLARIRPLFGRYLPPEVVAVRVPLLH LSNFQINDWPELSAKSYAVMVLILPTESARKWRDHELELVEVVADQVAVALSHAAILEESMRAR DQLMEQNVALKSARREAEMAIHARNDFLAVMNHEMRTPMHAIIALSSLLLETGLTTEQRAMIET VLKSSNLLAVLTNDVLDLSRLEDGSLDLDLKTFNLHELFREVVGLIKPIASVKKLSMTLIMAPD LPACAVGDEKRLTQTILNVVGNAVKFTKEGYVSIVVSVAKPDSLRDWQPPEFYPMTSDGHFYLR VQVKDSGCGVLPQDVPHLFTKFAQPQSGSSRSNGGAGLGLAICKRFTSVLIGRMESCDCIDMQW PHEELLVRYQYISDVLIAFAYFSIPIELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHFINLWT FSMHSKAVAVVMTVAKVACAIVSCATALMLVHIIPDLLSVKTRELFLKNKAEELDREMGLILTQ EETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRTGLNLQLSHTLNYQIQV GSSVPINLPIVNEVFSSAHAVRIPYNCPLARIRPLFGRYLPPEVVAVRVPLLHLSNFQINDWPE LSAKSYAVMVLILPTESARKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALK SARREAEMAIHARNDFLAVMNHEMRTPMHAIIALSSLLLETGLTTEQRAMIETVLKSSNLLAVL TNDVLDLSRLEDGSLDLDLKTFNLHELFREVVGLIKPIASVKKLSMTLIMAPDLPACAVGDEKR LTQTILNVVGNAVKFTKEGYVSIVVSVAKPDSLRDWQPPEFYPMTSDGHFYLRVQVKDSGCGVL PQDVPHLFTKFAQPQSGSSRSNGGAGLGLAICKRFTSVLIGRMESCDCIDMQWPHEELLVRYQY ISDVLIAFAYFSIPIELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHFINLWTFSMHSKAVAVV MTVAKVACAIVSCATALMLVHIIPDLLSVKTRELFLKNKAEELDREMGLILTQEETGRHVRMLT HEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRTGLNLQLSHTLNYQIQVGSSVPINLPIV NEVFSSAHAVRIPYNCPLARIRPLFGRYLPPEVVAVRVPLLHLSNFQINDWPELSAKSYAVMVL ILPTESARKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALKSARREAEMAIH ARNDFLAVMNHEMRTPMHAIIALSSLLLETGLTTEQRAMIETVLKSSNLLAVLTNDVLDLSRLE DGSLDLDLKTFNLHELFREVVGLIKPIASVKKLSMTLIMAPDLPACAVGDEKRLTQTILNVVGN AVKFTKEGYVSIVVSVAKPDSLRDWQPPEFYPMTSDGHFYLRVQVKDSGCGVLPQDVPHLFTKF AQPQSGSSRSNGGAGLGLAICKRFTSVLIGRMESCDCIDMQWPHEELLVRYQYISDVLIAFAYF SIPIELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHFINLWTFSMHSKAVAVVMTVAKVACAIV SCATALMLVHIIPDLLSVKTRELFLKNKAEELDREMGLILTQEETGRHVRMLTHEIRSTLDRHT ILKTTLVELGRTLGLEECALWMPSRTGLNLQLSHTLNYQIQVGSSVPINLPIVNEVFSSAHAVR IPYNCPLARIRPLFGRYLPPEVVAVRVPLLHLSNFQINDWPELSAKSYAVMVLILPTESARKWR DHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALKSARREAEMAIHARNDFLAVMNH EMRTPMHAIIALSSLLLETGLTTEQRAMIETVLKSSNLLAVLTNDVLDLSRLEDGSLDLDLKTF NLHELFREVVGLIKPIASVKKLSMTLIMAPDLPACAVGDEKRLTQTILNVVGNAVKFTKEGYVS IVVSVAKPDSLRDWQPPEFYPMTSDGHFYLRVQVKDSGCGVLPQDVPHLFTKFAQPQSGSSRSN GGAGLGLAICK(+) MATSIYACRLRILDAVFSHKMSHTFLLNLLSHKVDLVEVMVVQDLGLPSANDLPRY(+) MWPLHIDTVTGLHPSDQYRGKSFADGKPKSCTTITSTRSTLWLSKFSKKVWDILWENTASRILN LHA(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Liu et al., 2021

circRNA

Detail information of POPTR_0002s20260_circ_g.1

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