Plant Circular RNA Database

Detail information of Os03g0441000_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os03g0441000_circ_g.2
					
						ID in PlantcircBase
						osa_circ_020440
					
						Alias
						Os_ciR2949
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr3: 18640170-18643549  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, find_circ
					
						Parent gene
						
							Os03g0441000						
					
						Parent gene annotation
						
							Similar to Transcription initiation factor TFIID component TAF4 
family protein, expressed. (Os03t0441000-01);Similar to Transcri
ption initiation factor TFIID component TAF4 family protein, exp
ressed. (Os03t0441000-02);Similar to Transcription initiation fa
ctor TFIID component TAF4 family protein, expressed. (Os03t04410
00-03)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os03g0441000_circ_g.1 Os03g0441000_circ_g.3 Os03g0441000_circ_g.4 Os03g0441000_circ_g.5 						
					
						Support reads
						4/4
					
						Tissues
						root/shoot, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os03t0441000-03:8
Os03t0441000-02:5
Os03t0441000-01:8

General Information
CircRNA Name	Os03g0441000_circ_g.2
ID in PlantcircBase	osa_circ_020440
Alias	Os_ciR2949
Organism	Oryza sativa
Position	chr3: 18640170-18643549 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, find_circ
Parent gene	Os03g0441000
Parent gene annotation	Similar to Transcription initiation factor TFIID component TAF4 family protein, expressed. (Os03t0441000-01);Similar to Transcri ption initiation factor TFIID component TAF4 family protein, exp ressed. (Os03t0441000-02);Similar to Transcription initiation fa ctor TFIID component TAF4 family protein, expressed. (Os03t04410 00-03)
Parent gene strand	-
Alternative splicing	Os03g0441000_circ_g.1 Os03g0441000_circ_g.3 Os03g0441000_circ_g.4 Os03g0441000_circ_g.5
Support reads	4/4
Tissues	root/shoot, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os03t0441000-03:8 Os03t0441000-02:5 Os03t0441000-01:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CTGACGTAGAACCACTGGGAACATTCTGCTGATTGGAAACTTGACTTAACAAAGAATAGTTGCT
TGGATTTGTCTGTGGATTCCGTTGCCCATGAGCAGCatcactctgtttcctgattctttcagca
tcttcggccagctttttgtcccactgttctctagcttctctgttcaccctcaaaatgtgactac
gaacatct

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1326
Transcript exons: 18640170-18640316,18640402-18640458,18640528-18640583,18
640666-18640801,18640907-18640994,18641081-18641199,1864
2731-18642847,18642944-18643549
ATCACTCTGTTTCCTGATTCTTTCAGCATCTTCGGCCAGCTTTTTGTCCCACTGTTCTCTAGCT
TCTCTGTTCACCCTCAAAATGTGACTACGAACATCTGAAGACAAAGGATAAATTCGATGTCTTG
ATTTTTCAAGATCAACCCTCTGTTTTGAAAGTCTTATTGTATTGCTTATGAATCCTCGTAACCG
CTCTTCAACACACATCGATAGACATCGCTCCACGTCACTGCCTATGCTCTTCAAATTGCATTTC
CTCATGATCTCTGCTAATTTTTTTTTCAGAGGACCCTTTTGTAGGATGAGTTTTTCTTCTTCAA
GTTGTACGACCATCCGAGCAGCTTCTGAAACTCGACTCTCCTCCTTTGGAGCAGAGAAAAGTTG
CTCCTCTTCTTCCCTCAGATTAACACCACTAACTGCAGTAACATCATTCAGCTGGTCAATACTT
TGATCATGATAACCTCCGGATGTCTTCTGCTTTTTGCTAGATGGTGGAGGGGATGAGCCTAAAG
CGTCCAAAGGTTTCTTCTGTCCAGCAGATGCCTTCTTTTGAGGTGTTTTAGAAGCTGCTGCAGG
GGGAGGTGTTTGTGTAGCAGGTTGGATCTGCATGTTTGGTTCTGCTTGAGTGCCATGAGATCGA
TGAGGCTGACTTGAGTTTGTTGTGTTGAAAGATTTAGAAGTACCTGATGTTGATGGTTGGTTTT
CAGGAACACCAACACCCTTATTTGTGTGTTCTGTTGGAGGGAAAGATTTAGTTTTCTGCTCTTT
GTTTACTTGTTGCCATGGAGATATATTAGTTTGCAACGTTGGTCGTGCTGCCATGCTCCCAGTC
ACTGAGGTAACAGCTCCCTGGACTAATTGTCCTCTTTGACTGGAATCTGCCATTTGTGGTCTAA
GTGGTACAATTGGACCTCCAACTGGTCGTGGCAATGGACGAGCATGAATATTATTTGACCCAAG
CACAGGTAAAGATGTTTGTGGATGCTGTGTTGCTTGCCCTGGGGCTGATTGTATATTGTGTGGA
TGGCTGAGCATATGCCCCCCTTTCACATCTGACATGTTACTAGATTCATTAACCTTTTGCAAAT
TGCTTTCTGAAGATGGATAGCCCATGTTACTTTGCATTTGGCCTGACAAAGAAGGTCGGAAAAA
AGGTGGTCTTGGGCTGTCACTAGCTTGGTTTGCAGGAATGGAATGAGCTGACGGATATGATTTG
TGCTCAACTCCTGACGTAGAACCACTGGGAACATTCTGCTGATTGGAAACTTGACTTAACAAAG
AATAGTTGCTTGGATTTGTCTGTGGATTCCGTTGCCCATGAGCAGC
						
					

						Genomic sequence
						
							ATCACTCTGTTTCCTGATTCTTTCAGCATCTTCGGCCAGCTTTTTGTCCCACTGTTCTCTAGCT
TCTCTGTTCACCCTCAAAATGTGACTACGAACATCTGAAGACAAAGGATAAATTCGATGTCTTG
ATTTTTCAAGATCAACCCTCTACACAAAAGAAAGAACAAAATGAATTAGTATCTTAAGTAGAAT
TCTTTATTTGGAAAAGATCCATGAAATTAAGCCATCACACCTGTTTTGAAAGTCTTATTGTATT
GCTTATGAATCCTCGTAACCGCTCTTCAACACACTGAATAAAACTTACGTTAGATTAGGAACAA
AACAACTCCGGGAAGGGCGTTGCTAAACAGTAGCTCACCATCGATAGACATCGCTCCACGTCAC
TGCCTATGCTCTTCAAATTGCATTTCCTCACTGCCAAAACACCAGCATTAGATAATAAAATCAT
AAAAGACCCCTATCAAGTTAATTATTCTCGAAGGTCAAAGGTATTAACTGATCTCTGCTAATTT
TTTTTTCAGAGGACCCTTTTGTAGGATGAGTTTTTCTTCTTCAAGTTGTACGACCATCCGAGCA
GCTTCTGAAACTCGACTCTCCTCCTTTGGAGCAGAGAAAAGTTGCTCCTCTTCTTCCTGGTAAA
AAGGGACAAGTTATGCAAGTAATGTTAACTGAATAATGAGTACTCTAAGGTATGCAGAAAGCAA
ACCATCAGAATAAAAGCACATCAAGGAATATACCCTCAGATTAACACCACTAACTGCAGTAACA
TCATTCAGCTGGTCAATACTTTGATCATGATAACCTCCGGATGTCTTCTGCTTTTTGCTGGCAC
AATAGAAAATGGCATCAGAAACCATAGAGCAAGTATGATTAGAACGAGGTCATTAACTCAGTAT
AGCCATTGGAATTACCTAGATGGTGGAGGGGATGAGCCTAAAGCGTCCAAAGGTTTCTTCTGTC
CAGCAGATGCCTTCTTTTGAGGTGTTTTAGAAGCTGCTGCAGGGGGAGGTGTTTGTGTAGCAGG
TTGGATCTAATGATAAAAAAACTCTCGTAAATACTCTGTCAATATTCTGTACATAGTTATATTA
TTAATATATTAATGCAGTAGGAACCACTCCTGTTTTCTTGTAAAAAAATAAAATATTGGTTAGA
GCACAATAACAATATCGTGCATTACTGAAACACTTAGCTTGAACGAAAAAAAAAAAAAGTTAAA
CCCAACAGAAGCTAGCATGTGGCCAAATGGATAGAGGTGCAGATGAGCACCAAGCCCAGGGAAG
TTCAGCACCTAGCAAATTTTTGGATTACACATGTGTGCACTCAATGGGCATACACTTGCTAGAG
TTCTGAGAGATTTTCAGTTCTTCTGGCATTTTCCAAGTGTGTAGACATGTGCACAATCACATGT
GTAAGGTGATGTGACTGTGGTGCATGTACTTTGCATGTTCCAATGTACACTAAAATAAATAAAT
AAAACCCAGCAAGAATAATTGAACAAATGCAAGCAAGCATATGCCTCTATGCACATCATAAAAG
GCATATTTCATTTTTCCAATAAAATATAATAAATTGATATCCATATTTTTCAAACTCATGTGGG
GGCCACTGCTTATCAGTAGTTCTGATCAGGACCAAGTTTTACATAAACCGATCAGATCTGAGAT
TTTTAAAAAGTACTTTCTAGATTTAAACATTGGCAATAGGCCCAAAAAAGATCAACAGTAAGAC
ATACTCGAAAACAATTGCAAAATCACACATTCAATGAAATAGTATATCATCAATTATTTCACAA
AATTCAAATGCTTTTTTCCATCCTCCAGATCGATTCAACCATTGATGCCTACATCAAACTACTA
AGCTTCAATTGTTAGATCCTCCTGACTTGTAAAACATCTTTTGCTTAGCCCATTTGCATAACTG
TGCACTGTCACTCTGACATATAAATCTATTTCTTAGTACAAACTATATGTTTGCAGTGATGCGT
GTTATCATTCTAAAAGATATGAGAATAATCATATATGTTTAAAAGAGAAGATATAATTCTACGG
TTTTATTTTGAAATAGCTATGCTTGGCTACAGCCATCATTTGACCAGTTCCTCCTGCCTCAGAA
TACAAACTGGATTTTCTGGTTTCTAGTGCAAACATCAGGAGTATGAACTTGTAATTCTCAAACT
ATAAGTATACTCAGACCAAGTTTATAATTCCATCTAGCTGTTGCTCTAACTTAAGCCAAGGTGA
GCAAAACTAACTTAAGCTTGATCAATTATTAATAACCATAGTTATTACCAGTGTATCTTAAGCA
CTGTAATATACTCTGGATATGCTATATGTACAGATCCCACATGAGTCTCAAATAGGCAAAAATA
AACATATCAGTAAAAGCATAAATACATGTACAATTGGAACTTTGGCATTAGTAAGATCATCATA
TCTGAGCATTCATGTGAAAATATACAAAGAATAATAATGCATTTTTTTCAGCGGGAATCTATCT
TCCAGTTATATTGTTTTTCAAGTGACAATTAAGGTCCAACAACAAGTGCACACATCGACGTATA
CCTGCATGTTTGGTTCTGCTTGAGTGCCATGAGATCGATGAGGCTGACTTGAGTTTGTTGTGTT
GAAAGATTTAGAAGTACCTGATGTTGATGGTTGGTTTTCAGGAACACCAACACCCTTACATCCA
AAGGCTGTGTTAACTTGATTTACATGCATGGAGGCGCAAAAAAAAAAAAACACTTACGTAGATT
CAGAGCATTAGATTTCAGTTACCTTATTTGTGTGTTCTGTTGGAGGGAAAGATTTAGTTTTCTG
CTCTTTGTTTACTTGTTGCCATGGAGATATATTAGTTTGCAACGTTGGTCGTGCTGCCATGCTC
CCAGTCACTGAGGTAACAGCTCCCTGGACTAATTGTCCTCTTTGACTGGAATCTGCCATTTGTG
GTCTAAGTGGTACAATTGGACCTCCAACTGGTCGTGGCAATGGACGAGCATGAATATTATTTGA
CCCAAGCACAGGTAAAGATGTTTGTGGATGCTGTGTTGCTTGCCCTGGGGCTGATTGTATATTG
TGTGGATGGCTGAGCATATGCCCCCCTTTCACATCTGACATGTTACTAGATTCATTAACCTTTT
GCAAATTGCTTTCTGAAGATGGATAGCCCATGTTACTTTGCATTTGGCCTGACAAAGAAGGTCG
GAAAAAAGGTGGTCTTGGGCTGTCACTAGCTTGGTTTGCAGGAATGGAATGAGCTGACGGATAT
GATTTGTGCTCAACTCCTGACGTAGAACCACTGGGAACATTCTGCTGATTGGAAACTTGACTTA
ACAAAGAATAGTTGCTTGGATTTGTCTGTGGATTCCGTTGCCCATGAGCAGC
						
					

			
		

Sequences
Splice junction sequence	CTGACGTAGAACCACTGGGAACATTCTGCTGATTGGAAACTTGACTTAACAAAGAATAGTTGCT TGGATTTGTCTGTGGATTCCGTTGCCCATGAGCAGCatcactctgtttcctgattctttcagca tcttcggccagctttttgtcccactgttctctagcttctctgttcaccctcaaaatgtgactac gaacatct
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1326 Transcript exons: 18640170-18640316,18640402-18640458,18640528-18640583,18 640666-18640801,18640907-18640994,18641081-18641199,1864 2731-18642847,18642944-18643549 ATCACTCTGTTTCCTGATTCTTTCAGCATCTTCGGCCAGCTTTTTGTCCCACTGTTCTCTAGCT TCTCTGTTCACCCTCAAAATGTGACTACGAACATCTGAAGACAAAGGATAAATTCGATGTCTTG ATTTTTCAAGATCAACCCTCTGTTTTGAAAGTCTTATTGTATTGCTTATGAATCCTCGTAACCG CTCTTCAACACACATCGATAGACATCGCTCCACGTCACTGCCTATGCTCTTCAAATTGCATTTC CTCATGATCTCTGCTAATTTTTTTTTCAGAGGACCCTTTTGTAGGATGAGTTTTTCTTCTTCAA GTTGTACGACCATCCGAGCAGCTTCTGAAACTCGACTCTCCTCCTTTGGAGCAGAGAAAAGTTG CTCCTCTTCTTCCCTCAGATTAACACCACTAACTGCAGTAACATCATTCAGCTGGTCAATACTT TGATCATGATAACCTCCGGATGTCTTCTGCTTTTTGCTAGATGGTGGAGGGGATGAGCCTAAAG CGTCCAAAGGTTTCTTCTGTCCAGCAGATGCCTTCTTTTGAGGTGTTTTAGAAGCTGCTGCAGG GGGAGGTGTTTGTGTAGCAGGTTGGATCTGCATGTTTGGTTCTGCTTGAGTGCCATGAGATCGA TGAGGCTGACTTGAGTTTGTTGTGTTGAAAGATTTAGAAGTACCTGATGTTGATGGTTGGTTTT CAGGAACACCAACACCCTTATTTGTGTGTTCTGTTGGAGGGAAAGATTTAGTTTTCTGCTCTTT GTTTACTTGTTGCCATGGAGATATATTAGTTTGCAACGTTGGTCGTGCTGCCATGCTCCCAGTC ACTGAGGTAACAGCTCCCTGGACTAATTGTCCTCTTTGACTGGAATCTGCCATTTGTGGTCTAA GTGGTACAATTGGACCTCCAACTGGTCGTGGCAATGGACGAGCATGAATATTATTTGACCCAAG CACAGGTAAAGATGTTTGTGGATGCTGTGTTGCTTGCCCTGGGGCTGATTGTATATTGTGTGGA TGGCTGAGCATATGCCCCCCTTTCACATCTGACATGTTACTAGATTCATTAACCTTTTGCAAAT TGCTTTCTGAAGATGGATAGCCCATGTTACTTTGCATTTGGCCTGACAAAGAAGGTCGGAAAAA AGGTGGTCTTGGGCTGTCACTAGCTTGGTTTGCAGGAATGGAATGAGCTGACGGATATGATTTG TGCTCAACTCCTGACGTAGAACCACTGGGAACATTCTGCTGATTGGAAACTTGACTTAACAAAG AATAGTTGCTTGGATTTGTCTGTGGATTCCGTTGCCCATGAGCAGC
Genomic sequence	ATCACTCTGTTTCCTGATTCTTTCAGCATCTTCGGCCAGCTTTTTGTCCCACTGTTCTCTAGCT TCTCTGTTCACCCTCAAAATGTGACTACGAACATCTGAAGACAAAGGATAAATTCGATGTCTTG ATTTTTCAAGATCAACCCTCTACACAAAAGAAAGAACAAAATGAATTAGTATCTTAAGTAGAAT TCTTTATTTGGAAAAGATCCATGAAATTAAGCCATCACACCTGTTTTGAAAGTCTTATTGTATT GCTTATGAATCCTCGTAACCGCTCTTCAACACACTGAATAAAACTTACGTTAGATTAGGAACAA AACAACTCCGGGAAGGGCGTTGCTAAACAGTAGCTCACCATCGATAGACATCGCTCCACGTCAC TGCCTATGCTCTTCAAATTGCATTTCCTCACTGCCAAAACACCAGCATTAGATAATAAAATCAT AAAAGACCCCTATCAAGTTAATTATTCTCGAAGGTCAAAGGTATTAACTGATCTCTGCTAATTT TTTTTTCAGAGGACCCTTTTGTAGGATGAGTTTTTCTTCTTCAAGTTGTACGACCATCCGAGCA GCTTCTGAAACTCGACTCTCCTCCTTTGGAGCAGAGAAAAGTTGCTCCTCTTCTTCCTGGTAAA AAGGGACAAGTTATGCAAGTAATGTTAACTGAATAATGAGTACTCTAAGGTATGCAGAAAGCAA ACCATCAGAATAAAAGCACATCAAGGAATATACCCTCAGATTAACACCACTAACTGCAGTAACA TCATTCAGCTGGTCAATACTTTGATCATGATAACCTCCGGATGTCTTCTGCTTTTTGCTGGCAC AATAGAAAATGGCATCAGAAACCATAGAGCAAGTATGATTAGAACGAGGTCATTAACTCAGTAT AGCCATTGGAATTACCTAGATGGTGGAGGGGATGAGCCTAAAGCGTCCAAAGGTTTCTTCTGTC CAGCAGATGCCTTCTTTTGAGGTGTTTTAGAAGCTGCTGCAGGGGGAGGTGTTTGTGTAGCAGG TTGGATCTAATGATAAAAAAACTCTCGTAAATACTCTGTCAATATTCTGTACATAGTTATATTA TTAATATATTAATGCAGTAGGAACCACTCCTGTTTTCTTGTAAAAAAATAAAATATTGGTTAGA GCACAATAACAATATCGTGCATTACTGAAACACTTAGCTTGAACGAAAAAAAAAAAAAGTTAAA CCCAACAGAAGCTAGCATGTGGCCAAATGGATAGAGGTGCAGATGAGCACCAAGCCCAGGGAAG TTCAGCACCTAGCAAATTTTTGGATTACACATGTGTGCACTCAATGGGCATACACTTGCTAGAG TTCTGAGAGATTTTCAGTTCTTCTGGCATTTTCCAAGTGTGTAGACATGTGCACAATCACATGT GTAAGGTGATGTGACTGTGGTGCATGTACTTTGCATGTTCCAATGTACACTAAAATAAATAAAT AAAACCCAGCAAGAATAATTGAACAAATGCAAGCAAGCATATGCCTCTATGCACATCATAAAAG GCATATTTCATTTTTCCAATAAAATATAATAAATTGATATCCATATTTTTCAAACTCATGTGGG GGCCACTGCTTATCAGTAGTTCTGATCAGGACCAAGTTTTACATAAACCGATCAGATCTGAGAT TTTTAAAAAGTACTTTCTAGATTTAAACATTGGCAATAGGCCCAAAAAAGATCAACAGTAAGAC ATACTCGAAAACAATTGCAAAATCACACATTCAATGAAATAGTATATCATCAATTATTTCACAA AATTCAAATGCTTTTTTCCATCCTCCAGATCGATTCAACCATTGATGCCTACATCAAACTACTA AGCTTCAATTGTTAGATCCTCCTGACTTGTAAAACATCTTTTGCTTAGCCCATTTGCATAACTG TGCACTGTCACTCTGACATATAAATCTATTTCTTAGTACAAACTATATGTTTGCAGTGATGCGT GTTATCATTCTAAAAGATATGAGAATAATCATATATGTTTAAAAGAGAAGATATAATTCTACGG TTTTATTTTGAAATAGCTATGCTTGGCTACAGCCATCATTTGACCAGTTCCTCCTGCCTCAGAA TACAAACTGGATTTTCTGGTTTCTAGTGCAAACATCAGGAGTATGAACTTGTAATTCTCAAACT ATAAGTATACTCAGACCAAGTTTATAATTCCATCTAGCTGTTGCTCTAACTTAAGCCAAGGTGA GCAAAACTAACTTAAGCTTGATCAATTATTAATAACCATAGTTATTACCAGTGTATCTTAAGCA CTGTAATATACTCTGGATATGCTATATGTACAGATCCCACATGAGTCTCAAATAGGCAAAAATA AACATATCAGTAAAAGCATAAATACATGTACAATTGGAACTTTGGCATTAGTAAGATCATCATA TCTGAGCATTCATGTGAAAATATACAAAGAATAATAATGCATTTTTTTCAGCGGGAATCTATCT TCCAGTTATATTGTTTTTCAAGTGACAATTAAGGTCCAACAACAAGTGCACACATCGACGTATA CCTGCATGTTTGGTTCTGCTTGAGTGCCATGAGATCGATGAGGCTGACTTGAGTTTGTTGTGTT GAAAGATTTAGAAGTACCTGATGTTGATGGTTGGTTTTCAGGAACACCAACACCCTTACATCCA AAGGCTGTGTTAACTTGATTTACATGCATGGAGGCGCAAAAAAAAAAAAACACTTACGTAGATT CAGAGCATTAGATTTCAGTTACCTTATTTGTGTGTTCTGTTGGAGGGAAAGATTTAGTTTTCTG CTCTTTGTTTACTTGTTGCCATGGAGATATATTAGTTTGCAACGTTGGTCGTGCTGCCATGCTC CCAGTCACTGAGGTAACAGCTCCCTGGACTAATTGTCCTCTTTGACTGGAATCTGCCATTTGTG GTCTAAGTGGTACAATTGGACCTCCAACTGGTCGTGGCAATGGACGAGCATGAATATTATTTGA CCCAAGCACAGGTAAAGATGTTTGTGGATGCTGTGTTGCTTGCCCTGGGGCTGATTGTATATTG TGTGGATGGCTGAGCATATGCCCCCCTTTCACATCTGACATGTTACTAGATTCATTAACCTTTT GCAAATTGCTTTCTGAAGATGGATAGCCCATGTTACTTTGCATTTGGCCTGACAAAGAAGGTCG GAAAAAAGGTGGTCTTGGGCTGTCACTAGCTTGGTTTGCAGGAATGGAATGAGCTGACGGATAT GATTTGTGCTCAACTCCTGACGTAGAACCACTGGGAACATTCTGCTGATTGGAAACTTGACTTA ACAAAGAATAGTTGCTTGGATTTGTCTGTGGATTCCGTTGCCCATGAGCAGC

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_013198 						
					
						PMCS
						0.23940464

Conservation Information
Conserved circRNAs	osi_circ_013198
PMCS	0.23940464

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							18643542-18640268(+)
18643350-18640172(-)
18640200-18643497(-)
						
					

						Potential amino acid sequence
						
							MSSITLFPDSFSIFGQLFVPLFSSFSVHPQNVTTNI*(+)
MQSNMGYPSSESNLQKVNESSNMSDVKGGHMLSHPHNIQSAPGQATQHPQTSLPVLGSNNIHAR
PLPRPVGGPIVPLRPQMADSSQRGQLVQGAVTSVTGSMAARPTLQTNISPWQQVNKEQKTKSFP
PTEHTNKGVGVPENQPSTSGTSKSFNTTNSSQPHRSHGTQAEPNMQIQPATQTPPPAAASKTPQ
KKASAGQKKPLDALGSSPPPSSKKQKTSGGYHDQSIDQLNDVTAVSGVNLREEEEQLFSAPKEE
SRVSEAARMVVQLEEEKLILQKGPLKKKLAEIMRKCNLKSIGSDVERCLSMCVEERLRGFISNT
IRLSKQRVDLEKSRHRIYPLSSDVRSHILRVNREAREQWDKKLAEDAERIRKQSDAAHGQRNPQ
TNPSNYSLLSQVSNQQNVPSGSTSGVEHKSYPSAHSIPANQASDSPRPPFFRPSLSGQMQSNMG
YPSSESNLQKVNESSNMSDVKGGHMLSHPHNIQSAPGQATQHPQTSLPVLGSNNIHARPLPRPV
GGPIVPLRPQMADSSQRGQLVQGAVTSVTGSMAARPTLQTNISPWQQVNKEQKTKSFPPTEHTN
KGVGVPENQPSTSGTSKSFNTTNSSQPHRSHGTQAEPNMQIQPATQTPPPAAASKTPQKKASAG
QKKPLDALGSSPPPSSKKQKTSGGYHDQSIDQLNDVTAVSGVNLREEEEQLFSAPKEESRVSEA
ARMVVQLEEEKLILQKGPLKKKLAEIMRKCNLKSIGSDVERCLSMCVEERLRGFISNTIRLSKQ
RVDLEKSRHRIYPLSSDVRSHILRVNREAREQWDKKLAEDAERIRKQSDAAHGQRNPQTNPSNY
SLLSQVSNQQNVPSGSTSGVEHKSYPSAHSIPANQASDSPRPPFFRPSLSGQMQSNMGYPSSES
NLQKVNESSNMSDVKGGHMLSHPHNIQSAPGQATQHPQTSLPVLGSNNIHARPLPRPVGGPIVP
LRPQMADSSQRGQLVQGAVTSVTGSMAARPTLQTNISPWQQVNKEQKTKSFPPTEHTNKGVGVP
ENQPSTSGTSKSFNTTNSSQPHRSHGTQAEPNMQIQPATQTPPPAAASKTPQKKASAGQKKPLD
ALGSSPPPSSKKQKTSGGYHDQSIDQLNDVTAVSGVNLREEEEQLFSAPKEESRVSEAARMVVQ
LEEEKLILQKGPLKKKLAEIMRKCNLKSIGSDVERCLSMCVEERLRGFISNTIRLSKQRVDLEK
SRHRIYPLSSDVRSHILRVNREAREQWDKKLAEDAERIRKQSDAAHGQRNPQTNPSNYSLLSQV
SNQQNVPSGSTSGVEHKSYPSAHSIPANQASDSPRPPFFRPSLSGQMQSNMGYPSSESNLQKVN
ESSNMSDVKGGHMLSHPHNIQSAPGQATQHPQTSLPVLGSNNIHARPLPRPVGGPIVPLRPQMA
DSSQRGQLVQGAVTSVTGSMAARPTLQTNISPWQQVNKEQKTKSFPPTEHTNKGVGVPENQPST
SGTSKSFNTTNSSQPHRSHGTQAEPNMQIQPATQTPPPAAASKTPQKKASAGQKKPLDALGSSP
PPSSKKQKTSGGYHDQSIDQLNDVTAVSGVNLREEEEQLFSAPKEESRVSEAARMVVQLEEEKL
ILQKGPLKKKLAEIMRKCNLKSIGSDVERCLSMCVEERLRGFISNTIRLSKQRVDLEKSRHRIY
PLSSDVRSHILRVNREAREQWDKKLAEDAERIRKQSD(-)
MLKESGNRVMLLMGNGIHRQIQATILC*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	18643542-18640268(+) 18643350-18640172(-) 18640200-18643497(-)
Potential amino acid sequence	MSSITLFPDSFSIFGQLFVPLFSSFSVHPQNVTTNI(+) MQSNMGYPSSESNLQKVNESSNMSDVKGGHMLSHPHNIQSAPGQATQHPQTSLPVLGSNNIHAR PLPRPVGGPIVPLRPQMADSSQRGQLVQGAVTSVTGSMAARPTLQTNISPWQQVNKEQKTKSFP PTEHTNKGVGVPENQPSTSGTSKSFNTTNSSQPHRSHGTQAEPNMQIQPATQTPPPAAASKTPQ KKASAGQKKPLDALGSSPPPSSKKQKTSGGYHDQSIDQLNDVTAVSGVNLREEEEQLFSAPKEE SRVSEAARMVVQLEEEKLILQKGPLKKKLAEIMRKCNLKSIGSDVERCLSMCVEERLRGFISNT IRLSKQRVDLEKSRHRIYPLSSDVRSHILRVNREAREQWDKKLAEDAERIRKQSDAAHGQRNPQ TNPSNYSLLSQVSNQQNVPSGSTSGVEHKSYPSAHSIPANQASDSPRPPFFRPSLSGQMQSNMG YPSSESNLQKVNESSNMSDVKGGHMLSHPHNIQSAPGQATQHPQTSLPVLGSNNIHARPLPRPV GGPIVPLRPQMADSSQRGQLVQGAVTSVTGSMAARPTLQTNISPWQQVNKEQKTKSFPPTEHTN KGVGVPENQPSTSGTSKSFNTTNSSQPHRSHGTQAEPNMQIQPATQTPPPAAASKTPQKKASAG QKKPLDALGSSPPPSSKKQKTSGGYHDQSIDQLNDVTAVSGVNLREEEEQLFSAPKEESRVSEA ARMVVQLEEEKLILQKGPLKKKLAEIMRKCNLKSIGSDVERCLSMCVEERLRGFISNTIRLSKQ RVDLEKSRHRIYPLSSDVRSHILRVNREAREQWDKKLAEDAERIRKQSDAAHGQRNPQTNPSNY SLLSQVSNQQNVPSGSTSGVEHKSYPSAHSIPANQASDSPRPPFFRPSLSGQMQSNMGYPSSES NLQKVNESSNMSDVKGGHMLSHPHNIQSAPGQATQHPQTSLPVLGSNNIHARPLPRPVGGPIVP LRPQMADSSQRGQLVQGAVTSVTGSMAARPTLQTNISPWQQVNKEQKTKSFPPTEHTNKGVGVP ENQPSTSGTSKSFNTTNSSQPHRSHGTQAEPNMQIQPATQTPPPAAASKTPQKKASAGQKKPLD ALGSSPPPSSKKQKTSGGYHDQSIDQLNDVTAVSGVNLREEEEQLFSAPKEESRVSEAARMVVQ LEEEKLILQKGPLKKKLAEIMRKCNLKSIGSDVERCLSMCVEERLRGFISNTIRLSKQRVDLEK SRHRIYPLSSDVRSHILRVNREAREQWDKKLAEDAERIRKQSDAAHGQRNPQTNPSNYSLLSQV SNQQNVPSGSTSGVEHKSYPSAHSIPANQASDSPRPPFFRPSLSGQMQSNMGYPSSESNLQKVN ESSNMSDVKGGHMLSHPHNIQSAPGQATQHPQTSLPVLGSNNIHARPLPRPVGGPIVPLRPQMA DSSQRGQLVQGAVTSVTGSMAARPTLQTNISPWQQVNKEQKTKSFPPTEHTNKGVGVPENQPST SGTSKSFNTTNSSQPHRSHGTQAEPNMQIQPATQTPPPAAASKTPQKKASAGQKKPLDALGSSP PPSSKKQKTSGGYHDQSIDQLNDVTAVSGVNLREEEEQLFSAPKEESRVSEAARMVVQLEEEKL ILQKGPLKKKLAEIMRKCNLKSIGSDVERCLSMCVEERLRGFISNTIRLSKQRVDLEKSRHRIY PLSSDVRSHILRVNREAREQWDKKLAEDAERIRKQSD(-) MLKESGNRVMLLMGNGIHRQIQATILC(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os03g0441000_circ_g.2

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