Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT5G24800_circ_g.1 |
ID in PlantcircBase | ath_circ_040289 |
Alias | At_ciR4071 |
Organism | Arabidpsis thaliana |
Position | chr5: 8515666-8515837 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ, CIRI-full |
Parent gene | AT5G24800 |
Parent gene annotation |
Basic leucine zipper 9 |
Parent gene strand | + |
Alternative splicing | AT5G24800_circ_g.2 |
Support reads | 4 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT5G24800.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.173446514 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |