Plant Circular RNA Database

Detail information of Os01g0795100_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os01g0795100_circ_g.1
					
						ID in PlantcircBase
						osa_circ_004429
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr1: 33675712-33678547  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os01g0795100						
					
						Parent gene annotation
						
							Similar to Subtilase. (Os01t0795100-00)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os01t0795100-00:5

General Information
CircRNA Name	Os01g0795100_circ_g.1
ID in PlantcircBase	osa_circ_004429
Alias	NA
Organism	Oryza sativa
Position	chr1: 33675712-33678547 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os01g0795100
Parent gene annotation	Similar to Subtilase. (Os01t0795100-00)
Parent gene strand	+
Alternative splicing	NA
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os01t0795100-00:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GGGATATTGTAAGTTCGACAGCCAGATGCAACGGTATTGCGTGTGTTATTGTGGACTATTACAC
AGTGAAACAGATCGGAAAATACATACTCAGTGCAAGcaaggaagattctttggcctctatcatc
cacaactacaagcatggtttctcaggcttcgccgtgatgcttactgaagatcaagcaaagcaac
ttgcaggt

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1209
Transcript exons: 33675712-33675809,33676224-33676379,33676486-33677108,33
677226-33677302,33678293-33678547
CAAGGAAGATTCTTTGGCCTCTATCATCCACAACTACAAGCATGGTTTCTCAGGCTTCGCCGTG
ATGCTTACTGAAGATCAAGCAAAGCAACTTGCAGAATTTCCGGAAGTCCTTAGTGTGGAACCAA
GCAAAACGTATACGACGGCGACCACTCGGAGCTGGGACATGCTTGGACTGAACTACAGAATGCC
CACTGAACTGCTCCAGCGAACCAACTACGGCGAGGAGATAATCATTGGCATTGTTGACACTGGT
ATATGGCCGGAGTCGAGAAGCTTCAGCGACGAAGGTTACGGGCCGGTGCCGGCACGGTGGAAAG
GCGTGTGCCAGGTCGGCGAAGGATGGGGCAGCAACAACTGCAGCCGCAAGATCATCGGCGCGCG
GTTCTACCACGCCGGGGTGGACGAGGACGACCTCAAGATCGACTACCTCTCGCCCCGCGACGCG
AACGGCCATGGCACGCACACGGCGTCCACCGCGGCGGGCTCCGTCGTGGAGGCGGTCAGCTTCC
ACGGCCTGGGCGAGGGCGCCGCCCGCGGCGGCGCGCCCAGGGCTCGCATCGCCGTGTACAAGTC
CATGTGGGGCAGCGGCAGCGGCGCGGGGTCCGGGAGCACCGCCACCGTGCTGGCCGCCATCGAC
GACGCGATCCACGACGGCGTGGACGTGCTGTCGCTCTCCCTGGGGACCCTGGAGAACTCCTTCG
GCGCGCAGCACGCCGTCCAGAAGGGGATCACCGTGGTTTACGCCGCCATGAACCTTGGGCCTGC
GCCTCAGGTGGTTCAGAACACTGCCCCTTGGGTCATCACCGTCGCGGCGAGCAAGATCGATCGG
TCCTTCCCGACGGTGATCACGTTGGGTGACAAGCGACAGATAGTGGGACAATCTCTCTACTCTC
AAGGGAAGAACTCATCGCTCAGCGGTTTCAGACGCCTTGTCGTTGGAGTTGGAGGCAGGTGCAC
AGAGGATGCTCTGAATGGCACGGATGTCAAAGGAAGCATTGTGCTGTGCGCATCTTTTACTCTC
AACAAACCATCTATCCTTTTCCAAGAAGCTCTAGGAAACGTCGTGAAAGGCGGAGGGGTGGGCA
TGATTTTCGTTCAGTATACGTGGGATATTGTAAGTTCGACAGCCAGATGCAACGGTATTGCGTG
TGTTATTGTGGACTATTACACAGTGAAACAGATCGGAAAATACATACTCAGTGCAAG
						
					

						Genomic sequence
						
							CAAGGAAGATTCTTTGGCCTCTATCATCCACAACTACAAGCATGGTTTCTCAGGCTTCGCCGTG
ATGCTTACTGAAGATCAAGCAAAGCAACTTGCAGGTCAGGGTTTTGTCATCTAACCCTGTGTGT
TTTTCAATTGCTAACAATGCCTTTGTTAATAACTGATTTGGTCAATTCATGTACTCCCTCTGTT
TCACAATGTAAGTCATTCTAACATTTTCTACATTTATATTGATGTTAATGAATCTATACATATA
TATCTATCTAGATTCATTAACATCAATATGAATGTGGAAATGAATCTATACATATATATCTATC
TAGATTCATTAACATCAATATGAATGTGGAAAATGCTAGAATGACTTACATTGTGAAACGGATG
GAGTATATTTTAACTTTTGGAGTTCTTTTTCTCATTAGGGCTTTCTCCTAGGGATTAATAGAAC
AAGACCTAATGGGATATAGCCCCTGGTTATATATATTGTCATATTAATTCGCATTCTTTTACAG
AATTTCCGGAAGTCCTTAGTGTGGAACCAAGCAAAACGTATACGACGGCGACCACTCGGAGCTG
GGACATGCTTGGACTGAACTACAGAATGCCCACTGAACTGCTCCAGCGAACCAACTACGGCGAG
GAGATAATCATTGGCATTGTTGACACTGGTTAGAATTTGATAAAAGTCGATTACTGCATGATCT
TACTCAATGAACAAATTAAATGATCTGTGCAGATGCATTAATTTCGCGTCAAAGCTTTCGCGTA
CTACAGGTATATGGCCGGAGTCGAGAAGCTTCAGCGACGAAGGTTACGGGCCGGTGCCGGCACG
GTGGAAAGGCGTGTGCCAGGTCGGCGAAGGATGGGGCAGCAACAACTGCAGCCGCAAGATCATC
GGCGCGCGGTTCTACCACGCCGGGGTGGACGAGGACGACCTCAAGATCGACTACCTCTCGCCCC
GCGACGCGAACGGCCATGGCACGCACACGGCGTCCACCGCGGCGGGCTCCGTCGTGGAGGCGGT
CAGCTTCCACGGCCTGGGCGAGGGCGCCGCCCGCGGCGGCGCGCCCAGGGCTCGCATCGCCGTG
TACAAGTCCATGTGGGGCAGCGGCAGCGGCGCGGGGTCCGGGAGCACCGCCACCGTGCTGGCCG
CCATCGACGACGCGATCCACGACGGCGTGGACGTGCTGTCGCTCTCCCTGGGGACCCTGGAGAA
CTCCTTCGGCGCGCAGCACGCCGTCCAGAAGGGGATCACCGTGGTTTACGCCGCCATGAACCTT
GGGCCTGCGCCTCAGGTGGTTCAGAACACTGCCCCTTGGGTCATCACCGTCGCGGCGAGCAAGA
TCGATCGGTCCTTCCCGACGGTGATCACGTTGGGTGACAAGCGACAGATAGTGGTACGCTACGT
TCAAACTTCGAAGTTCAAAACGCCGTGCCACGAAGAACAAGAGTGTGCCGTGCATGCGTTGATT
ATATGTACTCTGCTGATGCATATCAAATCTTCCCATTTTCAGGGACAATCTCTCTACTCTCAAG
GGAAGAACTCATCGCTCAGCGGTTTCAGACGCCTTGTCGTTGGAGTTGGAGGCAGGTAAATAAT
TAAAGTCTTTCCTTTTCTCCCAAAAAAAATGTGGAGTACGGTTTTGCTATATGTTTATCAACAT
TTTTTCCCTCAGAATCACTTGAATTTTTAACGGTTAGATTTTGCATTGAGATTCACGTTTTCTT
TTGCGTCGTCGTTCTCACGTGAAGCGCAGTCGCATCTGGCCTCGCTCGCTCCTTGTTGTTCGCT
CTGGTTGTGGTAGAGTTTTTCTTTACTTCTTGTACGTTGACCTGCTCCTCGAGTAGCAAAAACA
GTAATGTATTATGTACTACCACACTTCTGGTTGTAGAGTATTCCGTCCGTTCCATTTCAGGTTA
TAAATCGTGTTGGTCAAAGTCAAACTATTTAAAGACCAAATTTTATAGATAAATATAGTAATAT
TTACAACACCAAATTAGTTAAATTAAATTTATAATTGAATATATTTTTATGATATATTTGTCTT
GAGTTGAAATTATTATTATTATTTTCTATAAACTTAGTCAAACTTAGAGCAGTTTAATTCTGAC
CAAAATCAAAACGTCTTATAACTTGAAACGGAGGGAGTAGTAAGTTACTATGCAAAGGTCACAT
ATGACATCTTGTGCTTTTTTTAATCAAGAATTATGTCTATAGCTACTGTTGTTTTACCAATTTA
CCACTTAGTCAAACTTAGAGCAGTTTAATTCTGACCAAAGTCAAAATGTCTTATAACCTGAAAC
GGAGGGAGTAGTAAGTTACTAGTTTTATCTATTAGTGTCAACATCGGGGAAAAAAAAGATAGTA
TGCAGTAAGTACGGACATGATTGATATGAAGTAACAAGTGTGGCAGCACAAGTTCATGTCTAGT
AATTTAGAATTTAAACACAGATTATGTGTTTAAAGTCACCCTAGATATCTAAGCAGTCACTTGT
TAAATTAAACTGCTTAATTCTTTGTGAAAATGTCACGAGCTCGGAAGCTGATACAATTTCACTT
GGCTTTTCTATGGTTAATTAGGTGCACAGAGGATGCTCTGAATGGCACGGATGTCAAAGGAAGC
ATTGTGCTGTGCGCATCTTTTACTCTCAACAAACCATCTATCCTTTTCCAAGAAGCTCTAGGAA
ACGTCGTGAAAGGCGGAGGGGTGGGCATGATTTTCGTTCAGTATACGTGGGATATTGTAAGTTC
GACAGCCAGATGCAACGGTATTGCGTGTGTTATTGTGGACTATTACACAGTGAAACAGATCGGA
AAATACATACTCAGTGCAAG
						
					

			
		

Sequences
Splice junction sequence	GGGATATTGTAAGTTCGACAGCCAGATGCAACGGTATTGCGTGTGTTATTGTGGACTATTACAC AGTGAAACAGATCGGAAAATACATACTCAGTGCAAGcaaggaagattctttggcctctatcatc cacaactacaagcatggtttctcaggcttcgccgtgatgcttactgaagatcaagcaaagcaac ttgcaggt
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1209 Transcript exons: 33675712-33675809,33676224-33676379,33676486-33677108,33 677226-33677302,33678293-33678547 CAAGGAAGATTCTTTGGCCTCTATCATCCACAACTACAAGCATGGTTTCTCAGGCTTCGCCGTG ATGCTTACTGAAGATCAAGCAAAGCAACTTGCAGAATTTCCGGAAGTCCTTAGTGTGGAACCAA GCAAAACGTATACGACGGCGACCACTCGGAGCTGGGACATGCTTGGACTGAACTACAGAATGCC CACTGAACTGCTCCAGCGAACCAACTACGGCGAGGAGATAATCATTGGCATTGTTGACACTGGT ATATGGCCGGAGTCGAGAAGCTTCAGCGACGAAGGTTACGGGCCGGTGCCGGCACGGTGGAAAG GCGTGTGCCAGGTCGGCGAAGGATGGGGCAGCAACAACTGCAGCCGCAAGATCATCGGCGCGCG GTTCTACCACGCCGGGGTGGACGAGGACGACCTCAAGATCGACTACCTCTCGCCCCGCGACGCG AACGGCCATGGCACGCACACGGCGTCCACCGCGGCGGGCTCCGTCGTGGAGGCGGTCAGCTTCC ACGGCCTGGGCGAGGGCGCCGCCCGCGGCGGCGCGCCCAGGGCTCGCATCGCCGTGTACAAGTC CATGTGGGGCAGCGGCAGCGGCGCGGGGTCCGGGAGCACCGCCACCGTGCTGGCCGCCATCGAC GACGCGATCCACGACGGCGTGGACGTGCTGTCGCTCTCCCTGGGGACCCTGGAGAACTCCTTCG GCGCGCAGCACGCCGTCCAGAAGGGGATCACCGTGGTTTACGCCGCCATGAACCTTGGGCCTGC GCCTCAGGTGGTTCAGAACACTGCCCCTTGGGTCATCACCGTCGCGGCGAGCAAGATCGATCGG TCCTTCCCGACGGTGATCACGTTGGGTGACAAGCGACAGATAGTGGGACAATCTCTCTACTCTC AAGGGAAGAACTCATCGCTCAGCGGTTTCAGACGCCTTGTCGTTGGAGTTGGAGGCAGGTGCAC AGAGGATGCTCTGAATGGCACGGATGTCAAAGGAAGCATTGTGCTGTGCGCATCTTTTACTCTC AACAAACCATCTATCCTTTTCCAAGAAGCTCTAGGAAACGTCGTGAAAGGCGGAGGGGTGGGCA TGATTTTCGTTCAGTATACGTGGGATATTGTAAGTTCGACAGCCAGATGCAACGGTATTGCGTG TGTTATTGTGGACTATTACACAGTGAAACAGATCGGAAAATACATACTCAGTGCAAG
Genomic sequence	CAAGGAAGATTCTTTGGCCTCTATCATCCACAACTACAAGCATGGTTTCTCAGGCTTCGCCGTG ATGCTTACTGAAGATCAAGCAAAGCAACTTGCAGGTCAGGGTTTTGTCATCTAACCCTGTGTGT TTTTCAATTGCTAACAATGCCTTTGTTAATAACTGATTTGGTCAATTCATGTACTCCCTCTGTT TCACAATGTAAGTCATTCTAACATTTTCTACATTTATATTGATGTTAATGAATCTATACATATA TATCTATCTAGATTCATTAACATCAATATGAATGTGGAAATGAATCTATACATATATATCTATC TAGATTCATTAACATCAATATGAATGTGGAAAATGCTAGAATGACTTACATTGTGAAACGGATG GAGTATATTTTAACTTTTGGAGTTCTTTTTCTCATTAGGGCTTTCTCCTAGGGATTAATAGAAC AAGACCTAATGGGATATAGCCCCTGGTTATATATATTGTCATATTAATTCGCATTCTTTTACAG AATTTCCGGAAGTCCTTAGTGTGGAACCAAGCAAAACGTATACGACGGCGACCACTCGGAGCTG GGACATGCTTGGACTGAACTACAGAATGCCCACTGAACTGCTCCAGCGAACCAACTACGGCGAG GAGATAATCATTGGCATTGTTGACACTGGTTAGAATTTGATAAAAGTCGATTACTGCATGATCT TACTCAATGAACAAATTAAATGATCTGTGCAGATGCATTAATTTCGCGTCAAAGCTTTCGCGTA CTACAGGTATATGGCCGGAGTCGAGAAGCTTCAGCGACGAAGGTTACGGGCCGGTGCCGGCACG GTGGAAAGGCGTGTGCCAGGTCGGCGAAGGATGGGGCAGCAACAACTGCAGCCGCAAGATCATC GGCGCGCGGTTCTACCACGCCGGGGTGGACGAGGACGACCTCAAGATCGACTACCTCTCGCCCC GCGACGCGAACGGCCATGGCACGCACACGGCGTCCACCGCGGCGGGCTCCGTCGTGGAGGCGGT CAGCTTCCACGGCCTGGGCGAGGGCGCCGCCCGCGGCGGCGCGCCCAGGGCTCGCATCGCCGTG TACAAGTCCATGTGGGGCAGCGGCAGCGGCGCGGGGTCCGGGAGCACCGCCACCGTGCTGGCCG CCATCGACGACGCGATCCACGACGGCGTGGACGTGCTGTCGCTCTCCCTGGGGACCCTGGAGAA CTCCTTCGGCGCGCAGCACGCCGTCCAGAAGGGGATCACCGTGGTTTACGCCGCCATGAACCTT GGGCCTGCGCCTCAGGTGGTTCAGAACACTGCCCCTTGGGTCATCACCGTCGCGGCGAGCAAGA TCGATCGGTCCTTCCCGACGGTGATCACGTTGGGTGACAAGCGACAGATAGTGGTACGCTACGT TCAAACTTCGAAGTTCAAAACGCCGTGCCACGAAGAACAAGAGTGTGCCGTGCATGCGTTGATT ATATGTACTCTGCTGATGCATATCAAATCTTCCCATTTTCAGGGACAATCTCTCTACTCTCAAG GGAAGAACTCATCGCTCAGCGGTTTCAGACGCCTTGTCGTTGGAGTTGGAGGCAGGTAAATAAT TAAAGTCTTTCCTTTTCTCCCAAAAAAAATGTGGAGTACGGTTTTGCTATATGTTTATCAACAT TTTTTCCCTCAGAATCACTTGAATTTTTAACGGTTAGATTTTGCATTGAGATTCACGTTTTCTT TTGCGTCGTCGTTCTCACGTGAAGCGCAGTCGCATCTGGCCTCGCTCGCTCCTTGTTGTTCGCT CTGGTTGTGGTAGAGTTTTTCTTTACTTCTTGTACGTTGACCTGCTCCTCGAGTAGCAAAAACA GTAATGTATTATGTACTACCACACTTCTGGTTGTAGAGTATTCCGTCCGTTCCATTTCAGGTTA TAAATCGTGTTGGTCAAAGTCAAACTATTTAAAGACCAAATTTTATAGATAAATATAGTAATAT TTACAACACCAAATTAGTTAAATTAAATTTATAATTGAATATATTTTTATGATATATTTGTCTT GAGTTGAAATTATTATTATTATTTTCTATAAACTTAGTCAAACTTAGAGCAGTTTAATTCTGAC CAAAATCAAAACGTCTTATAACTTGAAACGGAGGGAGTAGTAAGTTACTATGCAAAGGTCACAT ATGACATCTTGTGCTTTTTTTAATCAAGAATTATGTCTATAGCTACTGTTGTTTTACCAATTTA CCACTTAGTCAAACTTAGAGCAGTTTAATTCTGACCAAAGTCAAAATGTCTTATAACCTGAAAC GGAGGGAGTAGTAAGTTACTAGTTTTATCTATTAGTGTCAACATCGGGGAAAAAAAAGATAGTA TGCAGTAAGTACGGACATGATTGATATGAAGTAACAAGTGTGGCAGCACAAGTTCATGTCTAGT AATTTAGAATTTAAACACAGATTATGTGTTTAAAGTCACCCTAGATATCTAAGCAGTCACTTGT TAAATTAAACTGCTTAATTCTTTGTGAAAATGTCACGAGCTCGGAAGCTGATACAATTTCACTT GGCTTTTCTATGGTTAATTAGGTGCACAGAGGATGCTCTGAATGGCACGGATGTCAAAGGAAGC ATTGTGCTGTGCGCATCTTTTACTCTCAACAAACCATCTATCCTTTTCCAAGAAGCTCTAGGAA ACGTCGTGAAAGGCGGAGGGGTGGGCATGATTTTCGTTCAGTATACGTGGGATATTGTAAGTTC GACAGCCAGATGCAACGGTATTGCGTGTGTTATTGTGGACTATTACACAGTGAAACAGATCGGA AAATACATACTCAGTGCAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.230106799

Conservation Information
Conserved circRNAs	NA
PMCS	0.230106799

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							33678474-33675783(+)
33675777-33678544(+)
33675740-33678508(-)
33675756-33678395(-)
						
					

						Potential amino acid sequence
						
							MQRYCVCYCGLLHSETDRKIHTQCKQGRFFGLYHPQLQAWFLRLRRDAY*(+)
MLTEDQAKQLAEFPEVLSVEPSKTYTTATTRSWDMLGLNYRMPTELLQRTNYGEEIIIGIVDTG
IWPESRSFSDEGYGPVPARWKGVCQVGEGWGSNNCSRKIIGARFYHAGVDEDDLKIDYLSPRDA
NGHGTHTASTAAGSVVEAVSFHGLGEGAARGGAPRARIAVYKSMWGSGSGAGSGSTATVLAAID
DAIHDGVDVLSLSLGTLENSFGAQHAVQKGITVVYAAMNLGPAPQVVQNTAPWVITVAASKIDR
SFPTVITLGDKRQIVGQSLYSQGKNSSLSGFRRLVVGVGGRCTEDALNGTDVKGSIVLCASFTL
NKPSILFQEALGNVVKGGGVGMIFVQYTWDIVSSTARCNGIACVIVDYYTVKQIGKYILSASKE
DSLASIIHNYKHGFSGFAVMLTEDQAKQLAEFPEVLSVEPSKTYTTATTRSWDMLGLNYRMPTE
LLQRTNYGEEIIIGIVDTGIWPESRSFSDEGYGPVPARWKGVCQVGEGWGSNNCSRKIIGARFY
HAGVDEDDLKIDYLSPRDANGHGTHTASTAAGSVVEAVSFHGLGEGAARGGAPRARIAVYKSMW
GSGSGAGSGSTATVLAAIDDAIHDGVDVLSLSLGTLENSFGAQHAVQKGITVVYAAMNLGPAPQ
VVQNTAPWVITVAASKIDRSFPTVITLGDKRQIVGQSLYSQGKNSSLSGFRRLVVGVGGRCTED
ALNGTDVKGSIVLCASFTLNKPSILFQEALGNVVKGGGVGMIFVQYTWDIVSSTARCNGIACVI
VDYYTVKQIGKYILSASKEDSLASIIHNYKHGFSGFAVMLTEDQAKQLAEFPEVLSVEPSKTYT
TATTRSWDMLGLNYRMPTELLQRTNYGEEIIIGIVDTGIWPESRSFSDEGYGPVPARWKGVCQV
GEGWGSNNCSRKIIGARFYHAGVDEDDLKIDYLSPRDANGHGTHTASTAAGSVVEAVSFHGLGE
GAARGGAPRARIAVYKSMWGSGSGAGSGSTATVLAAIDDAIHDGVDVLSLSLGTLENSFGAQHA
VQKGITVVYAAMNLGPAPQVVQNTAPWVITVAASKIDRSFPTVITLGDKRQIVGQSLYSQGKNS
SLSGFRRLVVGVGGRCTEDALNGTDVKGSIVLCASFTLNKPSILFQEALGNVVKGGGVGMIFVQ
YTWDIVSSTARCNGIACVIVDYYTVKQIGKYILSASKEDSLASIIHNYKHGFSGFAVMLTEDQA
KQLAEFPEVLSVEPSKTYTTATTRSWDMLGLNYRMPTELLQRTNYGEEIIIGIVDTGIWPESRS
FSDEGYGPVPARWKGVCQVGEGWGSNNCSRKIIGARFYHAGVDEDDLKIDYLSPRDANGHGTHT
ASTAAGSVVEAVSFHGLGEGAARGGAPRARIAVYKSMWGSGSGAGSGSTATVLAAIDDAIHDGV
DVLSLSLGTLENSFGAQHAVQKGITVVYAAMNLGPAPQVVQNTAPWVITVAASKIDRSFPTVIT
LGDKRQIVGQSLYSQGKNSSLSGFRRLVVGVGGRCTEDALNGTDVKGSIVLCASFTLNKPSILF
QEALGNVVKGGGVGMIFVQYTWDIVSSTARCNGIACVIVDYYTVKQIGKYILSA(+)
MIEAKESSLLALSMYFPICFTV*(-)
MLVVVDDRGQRIFLACTEYVFSDLFHCVIVHNNTRNTVASGCRTYNIPRILNENHAHPSAFHDV
S*(-)
						
					

						Sponge-miRNAs
						
							osa-miR444f 						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	33678474-33675783(+) 33675777-33678544(+) 33675740-33678508(-) 33675756-33678395(-)
Potential amino acid sequence	MQRYCVCYCGLLHSETDRKIHTQCKQGRFFGLYHPQLQAWFLRLRRDAY(+) MLTEDQAKQLAEFPEVLSVEPSKTYTTATTRSWDMLGLNYRMPTELLQRTNYGEEIIIGIVDTG IWPESRSFSDEGYGPVPARWKGVCQVGEGWGSNNCSRKIIGARFYHAGVDEDDLKIDYLSPRDA NGHGTHTASTAAGSVVEAVSFHGLGEGAARGGAPRARIAVYKSMWGSGSGAGSGSTATVLAAID DAIHDGVDVLSLSLGTLENSFGAQHAVQKGITVVYAAMNLGPAPQVVQNTAPWVITVAASKIDR SFPTVITLGDKRQIVGQSLYSQGKNSSLSGFRRLVVGVGGRCTEDALNGTDVKGSIVLCASFTL NKPSILFQEALGNVVKGGGVGMIFVQYTWDIVSSTARCNGIACVIVDYYTVKQIGKYILSASKE DSLASIIHNYKHGFSGFAVMLTEDQAKQLAEFPEVLSVEPSKTYTTATTRSWDMLGLNYRMPTE LLQRTNYGEEIIIGIVDTGIWPESRSFSDEGYGPVPARWKGVCQVGEGWGSNNCSRKIIGARFY HAGVDEDDLKIDYLSPRDANGHGTHTASTAAGSVVEAVSFHGLGEGAARGGAPRARIAVYKSMW GSGSGAGSGSTATVLAAIDDAIHDGVDVLSLSLGTLENSFGAQHAVQKGITVVYAAMNLGPAPQ VVQNTAPWVITVAASKIDRSFPTVITLGDKRQIVGQSLYSQGKNSSLSGFRRLVVGVGGRCTED ALNGTDVKGSIVLCASFTLNKPSILFQEALGNVVKGGGVGMIFVQYTWDIVSSTARCNGIACVI VDYYTVKQIGKYILSASKEDSLASIIHNYKHGFSGFAVMLTEDQAKQLAEFPEVLSVEPSKTYT TATTRSWDMLGLNYRMPTELLQRTNYGEEIIIGIVDTGIWPESRSFSDEGYGPVPARWKGVCQV GEGWGSNNCSRKIIGARFYHAGVDEDDLKIDYLSPRDANGHGTHTASTAAGSVVEAVSFHGLGE GAARGGAPRARIAVYKSMWGSGSGAGSGSTATVLAAIDDAIHDGVDVLSLSLGTLENSFGAQHA VQKGITVVYAAMNLGPAPQVVQNTAPWVITVAASKIDRSFPTVITLGDKRQIVGQSLYSQGKNS SLSGFRRLVVGVGGRCTEDALNGTDVKGSIVLCASFTLNKPSILFQEALGNVVKGGGVGMIFVQ YTWDIVSSTARCNGIACVIVDYYTVKQIGKYILSASKEDSLASIIHNYKHGFSGFAVMLTEDQA KQLAEFPEVLSVEPSKTYTTATTRSWDMLGLNYRMPTELLQRTNYGEEIIIGIVDTGIWPESRS FSDEGYGPVPARWKGVCQVGEGWGSNNCSRKIIGARFYHAGVDEDDLKIDYLSPRDANGHGTHT ASTAAGSVVEAVSFHGLGEGAARGGAPRARIAVYKSMWGSGSGAGSGSTATVLAAIDDAIHDGV DVLSLSLGTLENSFGAQHAVQKGITVVYAAMNLGPAPQVVQNTAPWVITVAASKIDRSFPTVIT LGDKRQIVGQSLYSQGKNSSLSGFRRLVVGVGGRCTEDALNGTDVKGSIVLCASFTLNKPSILF QEALGNVVKGGGVGMIFVQYTWDIVSSTARCNGIACVIVDYYTVKQIGKYILSA(+) MIEAKESSLLALSMYFPICFTV(-) MLVVVDDRGQRIFLACTEYVFSDLFHCVIVHNNTRNTVASGCRTYNIPRILNENHAHPSAFHDV S*(-)
Sponge-miRNAs	osa-miR444f
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os01g0795100_circ_g.1

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