Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | PGSC0003DMG400046020_circ_ig.1 |
| ID in PlantcircBase | stu_circ_000135 |
| Alias | chr01:75101468|75106029 |
| Organism | Solanum tuberosum |
| Position | chr1: 75101469-75106029 JBrowse» |
| Reference genome | 3.0.38 |
| Type | ig-circRNA |
| Identification method | CIRI2 |
| Parent gene | NA |
| Parent gene annotation | NA |
| Parent gene strand | NA |
| Alternative splicing | PGSC0003DMG400046020_circ_ig.2 PGSC0003DMG400046020_circ_ig.3 PGSC0003DMG400046020_circ_ig.4 |
| Support reads | NA |
| Tissues | stem |
| Exon boundary | No-No |
| Splicing signals | GT-GA |
| Number of exons covered | NA |
| Conservation Information | |
|---|---|
| Conserved circRNAs | ath_circ_005244 ath_circ_005247 |
| PMCS | 0.108298129 |
| Functional Information | |
|---|---|
| Coding potential | NA |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Zhou et al., 2018 |