Detail information of BGIOSGA014915_circ_g.2


General Information
CircRNA Name BGIOSGA014915_circ_g.2
ID in PlantcircBase osi_circ_014451
Alias Chr04:23966537_23966883(ZS97RS2)
Organism Oryza sativa ssp. indica
Position chr4: 21877991-21878337  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   ei-circRNA
Identification method CIRI2
Parent gene BGIOSGA014915
Parent gene annotation NA
Parent gene strand -
Alternative splicing NA
Support reads NA
Tissues root, leaf, panicle
Exon boundary   No-Yes
Splicing signals   CT-AA
Number of exons covered BGIOSGA014915-TA:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   CAGCCTCTCCTCATTCTGAAGGATGAAGTGGTTCAGCTCCTGGTCACAGGACACTATGGTGGGG
GTGCAGAACAGATGGGACTTAAACACCCTCCCATACcctttcttgcctcctcgcagaaggcgat
gacattgaccatccccttgtccttgctcttgccatgccatgacccaactatatgcagtgcaatc
ttctcaat
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence CCTTTCTTGCCTCCTCGCAGAAGGCGATGACATTGACCATCCCCTTGTCCTTGCTCTTGCCATG
CCATGACCCAACTATATGCAGTGCAATCTTCTCAATGTCGCCAAGGTAGCTGGGCTTGAGCTTT
GTGGAGGTGACCAGTGCTAGAGCAAGGTTCCTGAGCCTCTTGTGGTCCTCCCCTAGGACCACTA
ACATGGAGGACTTGCCCAGAATGCCATGAATTGGCCTGGGGTAGCTGCACTGAAACAGCCTCTC
CTCATTCTGAAGGATGAAGTGGTTCAGCTCCTGGTCACAGGACACTATGGTGGGGGTGCAGAAC
AGATGGGACTTAAACACCCTCCCATAC
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021