Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d036181_circ_g.3 |
ID in PlantcircBase | zma_circ_008951 |
Alias | Zm06circ00028, zma_circ_0002098, GRMZM2G062638_C2 |
Organism | Zea mays |
Position | chr6: 76049858-76058358 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | CIRI2, find_circ |
Parent gene | Zm00001d036181 |
Parent gene annotation |
ATP-dependent peptidases;nucleotide binding;serine-type endopept idases;DNA helicases;ATP binding;damaged DNA binding;nucleoside- triphosphatases |
Parent gene strand | - |
Alternative splicing | Zm00001d036181_circ_igg.1 Zm00001d036181_circ_g.1 Zm00001d036181_circ_g.2 |
Support reads | NA |
Tissues | leaf, endosperm, root |
Exon boundary | No-Yes |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d036181_T001:6 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.107271495 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Han et al., 2020; Ma et al., 2021b;Zhang et al., 2019 |