Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d008789_circ_g.1 |
ID in PlantcircBase | zma_circ_005633 |
Alias | tassel_test_circ_001127 |
Organism | Zea mays |
Position | chr8: 20248959-20249252 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d008789 |
Parent gene annotation |
protein_coding |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | NA |
Tissues | tassel |
Exon boundary | No-No |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d008789_T028:2 Zm00001d008789_T001:2 Zm00001d008789_T022:2 Zm00001d008789_T018:2 Zm00001d008789_T020:2 Zm00001d008789_T015:2 Zm00001d008789_T009:2 Zm00001d008789_T004:2 Zm00001d008789_T031:2 Zm00001d008789_T024:2 Zm00001d008789_T033:1 Zm00001d008789_T006:2 Zm00001d008789_T030:2 Zm00001d008789_T035:2 Zm00001d008789_T014:2 Zm00001d008789_T005:2 Zm00001d008789_T002:2 Zm00001d008789_T003:2 Zm00001d008789_T016:2 Zm00001d008789_T008:2 Zm00001d008789_T012:2 Zm00001d008789_T026:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.320290334 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |