Detail information of AT2G03410_circ_g.1


General Information
CircRNA Name AT2G03410_circ_g.1
ID in PlantcircBase ath_circ_012673
Alias NA
Organism Arabidpsis thaliana
Position chr2: 1035389-1035485  JBrowse»
Reference genome TAIR10.38
Type   u-circRNA
Identification method PcircRNA_finder
Parent gene AT2G03410
Parent gene annotation MO25-like protein At2g03410
Parent gene strand +
Alternative splicing NA
Support reads 1
Tissues whole_plant
Exon boundary   Yes-Yes
Splicing signals   CT-AC
Number of exons covered AT2G03420.1:1
AT2G03410.1:1
AT2G03420.1:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   AATCTTTGAATCTGGCATCGTTCTCTGCGTAGAACTTCTGGTTTTTTGttttctttgttgagtt
tggaattctcaagtaatttcttgagaagtggag
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence TTTTCTTTGTTGAGTTTGGAATTCTCAAGTAATTTCTTGAGAAGTGGAGAATCTTTGAATCTGG
CATCGTTCTCTGCGTAGAACTTCTGGTTTTTTG
Conservation Information
Conserved circRNAs NA
PMCS 0.213123452
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Chu et al., 2017