Plant Circular RNA Database

Detail information of Os07g0497100_circ_g.4

			
						 General Information
					
						CircRNA Name
						Os07g0497100_circ_g.4
					
						ID in PlantcircBase
						osa_circ_033923
					
						Alias
						Os_ciR5560
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr7: 18631758-18634951  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Os07g0497100						
					
						Parent gene annotation
						
							Chromodomain, helicase/ATPase, and DNA-binding domain (CHD) prot
ein, Chromatin-remodeling factor, Mi-2-like protein, Crown root 
development, Chloroplast development in adaxial mesophyll, Maint
enance of H3K4me3 (Os07t0497100-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os07g0497100_circ_g.5 						
					
						Support reads
						3
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os07t0497100-01:2

General Information
CircRNA Name	Os07g0497100_circ_g.4
ID in PlantcircBase	osa_circ_033923
Alias	Os_ciR5560
Organism	Oryza sativa
Position	chr7: 18631758-18634951 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	find_circ
Parent gene	Os07g0497100
Parent gene annotation	Chromodomain, helicase/ATPase, and DNA-binding domain (CHD) prot ein, Chromatin-remodeling factor, Mi-2-like protein, Crown root development, Chloroplast development in adaxial mesophyll, Maint enance of H3K4me3 (Os07t0497100-01)
Parent gene strand	-
Alternative splicing	Os07g0497100_circ_g.5
Support reads	3
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os07t0497100-01:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CGGATGCACTAGGAGGGGCCATATCAATCTGCTCTGATGAAGCATGGGCAGGTGAAATGATTTG
GCTTGTCTGAAGTCGACAGCCTAGGATGCGATCAACctgacacgtaagagtttatcccattcat
tttcttcaacacgattagctgcatcctgctttgcttcagatgcctgctcgcaaccatcattatc
aatatttg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 2855
Transcript exons: 18631758-18631912,18632252-18634951
CTGACACGTAAGAGTTTATCCCATTCATTTTCTTCAACACGATTAGCTGCATCCTGCTTTGCTT
CAGATGCCTGCTCGCAACCATCATTATCAATATTTGGGATGTCCTCGGTGGCACCAGGGTCATC
ATTCAGCTCATCGTTCCAATCTATTGACTTTACAGTGCCAAGCATATCATTGTCCAAGTCCCCA
TCAGTGCTTTCAGCTACTGTTGATGGAACGTTGGATCTGTCAAGAAGCTTTGTGATAGCATTTT
CATCCCAAATAAATTTAGCAGAACCATCAGCACATCTGTCTTCATAAACATCGCCTAGTCCACC
AGTTTTTCTTTTATGCTTAAACTCAACCTCTGCTACATCATTTTTAGCACCAGAAGCTTCATTA
TTATCTTTAACTGCAACATCGCTATTCCTGAAGAGTTCCTCTGTTCCCCAGCGAATGATATCTT
CCACTTCCTTCTGTGATTCTGATTTGTTAACAAAAAGTTGATCAAGCATCAATTTTTTCTTCGC
AAGGTGCAAGATACGCTCCTCAACACTAGCACGCACGACAAGCCTGTAAACTAAAAGTCTGTTT
GACTGTCCAATTCTGTGTGCTCTGTTCATTGCCTGTATATCAGCATGTGGATTGAAATCAGAAT
CATATATGATAACAGTATCTGCAGTTGCCAAATTAATTCCAAGCCCACATGACCGCGTAGATAG
CAGGAATACAAAACGACTCTTGTCCTGATTAAAACGAGCAATTGCTGCCTGGCGTTCTGCCACA
GATACTGAACCATCCACTCTTTCAAATGTTTTCGGACCAAACTCCCAAGTCAGGTAATCTTCAA
GGATGTCAAGAAGCTTTGTCATCTGAGAAAAAATAAGAACTCGATGACCATCCTTGTGTAGGAT
TTTAAGCATAGAGTGCAACAAAGTTAACTTTGCTGAGGCCTTTATTCGCATTTCATGCAAGAAC
TCTGGTGATCCTGATTCAGGTTCAGTTCCAGGAATAAGATACGGATGATTGCAGACTTTCCGAA
GTTGCATTACTATGTTCAACAATGACTGGTGAGCACCACCTTTCCCAATATTGCGCAATACTTG
GTAGTTCTTTGTAAGCATAGCACGGTAGTATTCAGCCTGGATTGATGTCAATTCAACAGGCACC
ATTCGTTCAGTCTTTGGAGGGATATTTTGCATTGCATCCTTTTTCAGTCTTCGAAGCATATGTG
GAGCTACAAGGTTCTTCAGCTCCTCCACTTTCTCTGTTGTTGTAAGGTCATTGAATTTCTCCTC
AAATGAAGCTAGAGAAGGGAAAGAAGCAGGTTGTAAGAAGTTCAATAAGTTATACATTTCACCA
ATGTTATTCTGTAACGGAGTTCCAGTCAGCAAAACTCTATGCTGAAATGATAATGTATTGAGTA
AACTGAAAAGTTTGCTGCTAGAATTCTTCAGACGATGACCCTCATCGACTATAAGAACCTCCCA
TGACACAGACCGAAGATATGCAGCATCAACAAGCACCATTTCATAAGTAGTGAGCAATACATTG
AACTTATGAGATTTCTTGATTTTACCCATCTGGCTTGCATCACCCTCATGCCACTCATATTGAC
GAATAATAGATCTTGCCCGTGCAGAACCATGATACTCCACAACATTTAAATGAGGTGCCCATGA
TGCAAATTCAGCCATCCAGTTGGGCATAGTAGAAAGAGGAACCAAGACAAGACATGGCAAGTTA
ATCTTATATTCACAACATAGGGATGATAGAAAAGCACAGGCAGACACAGTCTTTCCAAGACCCA
TCTCATCAGCAAGGATAACATTTTTTGACTTGTACCAGCATTTGCGTAGCCAGTTCAATGCTTC
CAGTTGATGAGGGAAGAGCATGCCTCCCTGGAGTTCTTTTGGCTGCTCAACCAGCATATTAAAC
TCTTGGTGTTCCCTTGGCTTTGCATGGCTACCTCCCTTATCCTTATCCAAAGCCTGGGATTCAA
ATTTTTTGAACTGAGTGACCAAATGTGCATACTTCACCATTGTAGGTTCATCTAATCTTTCCCA
CGTGCATTCGTCATATGGAAGGGCACACCATTTGATCAAAGCCTCTTCTATTTCATCTAAAGAA
GTGCGCAGAGCAATAACTCGTTGCGGTTGGCACCATTGTTCTTTGCAGATGTTTATCAAACCTG
TTCCGTACTTTGCTTTGTAGTTTTCTAGTTTCCTTTTTGCTAATGCTTTCAGCTCAGATTCAGA
AATCCAGCTGTTATGGATATTCGATTTGCCAACCCATTTAACTAAAAACTCATAAGTAGTTCCG
TCGTGCTCCTTCAATTCAGTTTCTTGTATTTTCCCATGCAATTTACTATCAGGTGTATGTTCTT
GTTTAGTGTGGACTTCTGTGTCAGCTTTGGAAACTGGATGTTTGGTGTCATTCTTTTCTTCTGG
AATATCAGTTACTGTCTCATATTCACCATTTACTGAAGCTGTTACATATGTCTGTACTGCTCCA
GCATCCTTAACAGTGACGATTTGATCAGCGGAACATGCTGATGCTGTATTCATGATTTCTTTTG
CGTTAAGTGATTCCTTGTGTCCATGGGATCTAACATTACTCTCCTTTTGAGCATCAGAACAATC
CAAATTATTTTCCCCACCATCGTTTGCTAATTCATCAGCACATGCATCCTCTGTCACATTAGTA
TCACTATTAGAAGACTGAATTTCTTCATGAAGTCCTTTTAAAAGGGCTTGACTAGGTTCTGGTG
CACCGGATGCACTAGGAGGGGCCATATCAATCTGCTCTGATGAAGCATGGGCAGGTGAAATGAT
TTGGCTTGTCTGAAGTCGACAGCCTAGGATGCGATCAAC
						
					

						Genomic sequence
						
							CTGACACGTAAGAGTTTATCCCATTCATTTTCTTCAACACGATTAGCTGCATCCTGCTTTGCTT
CAGATGCCTGCTCGCAACCATCATTATCAATATTTGGGATGTCCTCGGTGGCACCAGGGTCATC
ATTCAGCTCATCGTTCCAATCTATTGACTGATAAATGGGTTTAAAAGAGAATTAATTAAGAACC
ACACAGAGAAGTTATTGATTGCACAAAGTATAACATACATCAGAATATGATGGACAGTACCATA
CAGAAAAAAAATGCAATGGTTAAAAGTGGTCTAAGAAATTAAAGATCTAAATTAGTGTAGAAAT
TTGTCTGTAACTGGACATAAACAAAAAAAGTTTAATTGAGAAAAAATGATTAGAAACTTCCTTT
AAGTAAAACACTATTTTTTGGTGACACACAGACAAGATGGCATTCTAGATATCACAATTCATTG
CATGAGTAGTCAATTATTTAAAAAGAAGGTACACAAATTAAATTACCTTTACAGTGCCAAGCAT
ATCATTGTCCAAGTCCCCATCAGTGCTTTCAGCTACTGTTGATGGAACGTTGGATCTGTCAAGA
AGCTTTGTGATAGCATTTTCATCCCAAATAAATTTAGCAGAACCATCAGCACATCTGTCTTCAT
AAACATCGCCTAGTCCACCAGTTTTTCTTTTATGCTTAAACTCAACCTCTGCTACATCATTTTT
AGCACCAGAAGCTTCATTATTATCTTTAACTGCAACATCGCTATTCCTGAAGAGTTCCTCTGTT
CCCCAGCGAATGATATCTTCCACTTCCTTCTGTGATTCTGATTTGTTAACAAAAAGTTGATCAA
GCATCAATTTTTTCTTCGCAAGGTGCAAGATACGCTCCTCAACACTAGCACGCACGACAAGCCT
GTAAACTAAAAGTCTGTTTGACTGTCCAATTCTGTGTGCTCTGTTCATTGCCTGTATATCAGCA
TGTGGATTGAAATCAGAATCATATATGATAACAGTATCTGCAGTTGCCAAATTAATTCCAAGCC
CACATGACCGCGTAGATAGCAGGAATACAAAACGACTCTTGTCCTGATTAAAACGAGCAATTGC
TGCCTGGCGTTCTGCCACAGATACTGAACCATCCACTCTTTCAAATGTTTTCGGACCAAACTCC
CAAGTCAGGTAATCTTCAAGGATGTCAAGAAGCTTTGTCATCTGAGAAAAAATAAGAACTCGAT
GACCATCCTTGTGTAGGATTTTAAGCATAGAGTGCAACAAAGTTAACTTTGCTGAGGCCTTTAT
TCGCATTTCATGCAAGAACTCTGGTGATCCTGATTCAGGTTCAGTTCCAGGAATAAGATACGGA
TGATTGCAGACTTTCCGAAGTTGCATTACTATGTTCAACAATGACTGGTGAGCACCACCTTTCC
CAATATTGCGCAATACTTGGTAGTTCTTTGTAAGCATAGCACGGTAGTATTCAGCCTGGATTGA
TGTCAATTCAACAGGCACCATTCGTTCAGTCTTTGGAGGGATATTTTGCATTGCATCCTTTTTC
AGTCTTCGAAGCATATGTGGAGCTACAAGGTTCTTCAGCTCCTCCACTTTCTCTGTTGTTGTAA
GGTCATTGAATTTCTCCTCAAATGAAGCTAGAGAAGGGAAAGAAGCAGGTTGTAAGAAGTTCAA
TAAGTTATACATTTCACCAATGTTATTCTGTAACGGAGTTCCAGTCAGCAAAACTCTATGCTGA
AATGATAATGTATTGAGTAAACTGAAAAGTTTGCTGCTAGAATTCTTCAGACGATGACCCTCAT
CGACTATAAGAACCTCCCATGACACAGACCGAAGATATGCAGCATCAACAAGCACCATTTCATA
AGTAGTGAGCAATACATTGAACTTATGAGATTTCTTGATTTTACCCATCTGGCTTGCATCACCC
TCATGCCACTCATATTGACGAATAATAGATCTTGCCCGTGCAGAACCATGATACTCCACAACAT
TTAAATGAGGTGCCCATGATGCAAATTCAGCCATCCAGTTGGGCATAGTAGAAAGAGGAACCAA
GACAAGACATGGCAAGTTAATCTTATATTCACAACATAGGGATGATAGAAAAGCACAGGCAGAC
ACAGTCTTTCCAAGACCCATCTCATCAGCAAGGATAACATTTTTTGACTTGTACCAGCATTTGC
GTAGCCAGTTCAATGCTTCCAGTTGATGAGGGAAGAGCATGCCTCCCTGGAGTTCTTTTGGCTG
CTCAACCAGCATATTAAACTCTTGGTGTTCCCTTGGCTTTGCATGGCTACCTCCCTTATCCTTA
TCCAAAGCCTGGGATTCAAATTTTTTGAACTGAGTGACCAAATGTGCATACTTCACCATTGTAG
GTTCATCTAATCTTTCCCACGTGCATTCGTCATATGGAAGGGCACACCATTTGATCAAAGCCTC
TTCTATTTCATCTAAAGAAGTGCGCAGAGCAATAACTCGTTGCGGTTGGCACCATTGTTCTTTG
CAGATGTTTATCAAACCTGTTCCGTACTTTGCTTTGTAGTTTTCTAGTTTCCTTTTTGCTAATG
CTTTCAGCTCAGATTCAGAAATCCAGCTGTTATGGATATTCGATTTGCCAACCCATTTAACTAA
AAACTCATAAGTAGTTCCGTCGTGCTCCTTCAATTCAGTTTCTTGTATTTTCCCATGCAATTTA
CTATCAGGTGTATGTTCTTGTTTAGTGTGGACTTCTGTGTCAGCTTTGGAAACTGGATGTTTGG
TGTCATTCTTTTCTTCTGGAATATCAGTTACTGTCTCATATTCACCATTTACTGAAGCTGTTAC
ATATGTCTGTACTGCTCCAGCATCCTTAACAGTGACGATTTGATCAGCGGAACATGCTGATGCT
GTATTCATGATTTCTTTTGCGTTAAGTGATTCCTTGTGTCCATGGGATCTAACATTACTCTCCT
TTTGAGCATCAGAACAATCCAAATTATTTTCCCCACCATCGTTTGCTAATTCATCAGCACATGC
ATCCTCTGTCACATTAGTATCACTATTAGAAGACTGAATTTCTTCATGAAGTCCTTTTAAAAGG
GCTTGACTAGGTTCTGGTGCACCGGATGCACTAGGAGGGGCCATATCAATCTGCTCTGATGAAG
CATGGGCAGGTGAAATGATTTGGCTTGTCTGAAGTCGACAGCCTAGGATGCGATCAAC
						
					

			
		

Sequences
Splice junction sequence	CGGATGCACTAGGAGGGGCCATATCAATCTGCTCTGATGAAGCATGGGCAGGTGAAATGATTTG GCTTGTCTGAAGTCGACAGCCTAGGATGCGATCAACctgacacgtaagagtttatcccattcat tttcttcaacacgattagctgcatcctgctttgcttcagatgcctgctcgcaaccatcattatc aatatttg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 2855 Transcript exons: 18631758-18631912,18632252-18634951 CTGACACGTAAGAGTTTATCCCATTCATTTTCTTCAACACGATTAGCTGCATCCTGCTTTGCTT CAGATGCCTGCTCGCAACCATCATTATCAATATTTGGGATGTCCTCGGTGGCACCAGGGTCATC ATTCAGCTCATCGTTCCAATCTATTGACTTTACAGTGCCAAGCATATCATTGTCCAAGTCCCCA TCAGTGCTTTCAGCTACTGTTGATGGAACGTTGGATCTGTCAAGAAGCTTTGTGATAGCATTTT CATCCCAAATAAATTTAGCAGAACCATCAGCACATCTGTCTTCATAAACATCGCCTAGTCCACC AGTTTTTCTTTTATGCTTAAACTCAACCTCTGCTACATCATTTTTAGCACCAGAAGCTTCATTA TTATCTTTAACTGCAACATCGCTATTCCTGAAGAGTTCCTCTGTTCCCCAGCGAATGATATCTT CCACTTCCTTCTGTGATTCTGATTTGTTAACAAAAAGTTGATCAAGCATCAATTTTTTCTTCGC AAGGTGCAAGATACGCTCCTCAACACTAGCACGCACGACAAGCCTGTAAACTAAAAGTCTGTTT GACTGTCCAATTCTGTGTGCTCTGTTCATTGCCTGTATATCAGCATGTGGATTGAAATCAGAAT CATATATGATAACAGTATCTGCAGTTGCCAAATTAATTCCAAGCCCACATGACCGCGTAGATAG CAGGAATACAAAACGACTCTTGTCCTGATTAAAACGAGCAATTGCTGCCTGGCGTTCTGCCACA GATACTGAACCATCCACTCTTTCAAATGTTTTCGGACCAAACTCCCAAGTCAGGTAATCTTCAA GGATGTCAAGAAGCTTTGTCATCTGAGAAAAAATAAGAACTCGATGACCATCCTTGTGTAGGAT TTTAAGCATAGAGTGCAACAAAGTTAACTTTGCTGAGGCCTTTATTCGCATTTCATGCAAGAAC TCTGGTGATCCTGATTCAGGTTCAGTTCCAGGAATAAGATACGGATGATTGCAGACTTTCCGAA GTTGCATTACTATGTTCAACAATGACTGGTGAGCACCACCTTTCCCAATATTGCGCAATACTTG GTAGTTCTTTGTAAGCATAGCACGGTAGTATTCAGCCTGGATTGATGTCAATTCAACAGGCACC ATTCGTTCAGTCTTTGGAGGGATATTTTGCATTGCATCCTTTTTCAGTCTTCGAAGCATATGTG GAGCTACAAGGTTCTTCAGCTCCTCCACTTTCTCTGTTGTTGTAAGGTCATTGAATTTCTCCTC AAATGAAGCTAGAGAAGGGAAAGAAGCAGGTTGTAAGAAGTTCAATAAGTTATACATTTCACCA ATGTTATTCTGTAACGGAGTTCCAGTCAGCAAAACTCTATGCTGAAATGATAATGTATTGAGTA AACTGAAAAGTTTGCTGCTAGAATTCTTCAGACGATGACCCTCATCGACTATAAGAACCTCCCA TGACACAGACCGAAGATATGCAGCATCAACAAGCACCATTTCATAAGTAGTGAGCAATACATTG AACTTATGAGATTTCTTGATTTTACCCATCTGGCTTGCATCACCCTCATGCCACTCATATTGAC GAATAATAGATCTTGCCCGTGCAGAACCATGATACTCCACAACATTTAAATGAGGTGCCCATGA TGCAAATTCAGCCATCCAGTTGGGCATAGTAGAAAGAGGAACCAAGACAAGACATGGCAAGTTA ATCTTATATTCACAACATAGGGATGATAGAAAAGCACAGGCAGACACAGTCTTTCCAAGACCCA TCTCATCAGCAAGGATAACATTTTTTGACTTGTACCAGCATTTGCGTAGCCAGTTCAATGCTTC CAGTTGATGAGGGAAGAGCATGCCTCCCTGGAGTTCTTTTGGCTGCTCAACCAGCATATTAAAC TCTTGGTGTTCCCTTGGCTTTGCATGGCTACCTCCCTTATCCTTATCCAAAGCCTGGGATTCAA ATTTTTTGAACTGAGTGACCAAATGTGCATACTTCACCATTGTAGGTTCATCTAATCTTTCCCA CGTGCATTCGTCATATGGAAGGGCACACCATTTGATCAAAGCCTCTTCTATTTCATCTAAAGAA GTGCGCAGAGCAATAACTCGTTGCGGTTGGCACCATTGTTCTTTGCAGATGTTTATCAAACCTG TTCCGTACTTTGCTTTGTAGTTTTCTAGTTTCCTTTTTGCTAATGCTTTCAGCTCAGATTCAGA AATCCAGCTGTTATGGATATTCGATTTGCCAACCCATTTAACTAAAAACTCATAAGTAGTTCCG TCGTGCTCCTTCAATTCAGTTTCTTGTATTTTCCCATGCAATTTACTATCAGGTGTATGTTCTT GTTTAGTGTGGACTTCTGTGTCAGCTTTGGAAACTGGATGTTTGGTGTCATTCTTTTCTTCTGG AATATCAGTTACTGTCTCATATTCACCATTTACTGAAGCTGTTACATATGTCTGTACTGCTCCA GCATCCTTAACAGTGACGATTTGATCAGCGGAACATGCTGATGCTGTATTCATGATTTCTTTTG CGTTAAGTGATTCCTTGTGTCCATGGGATCTAACATTACTCTCCTTTTGAGCATCAGAACAATC CAAATTATTTTCCCCACCATCGTTTGCTAATTCATCAGCACATGCATCCTCTGTCACATTAGTA TCACTATTAGAAGACTGAATTTCTTCATGAAGTCCTTTTAAAAGGGCTTGACTAGGTTCTGGTG CACCGGATGCACTAGGAGGGGCCATATCAATCTGCTCTGATGAAGCATGGGCAGGTGAAATGAT TTGGCTTGTCTGAAGTCGACAGCCTAGGATGCGATCAAC
Genomic sequence	CTGACACGTAAGAGTTTATCCCATTCATTTTCTTCAACACGATTAGCTGCATCCTGCTTTGCTT CAGATGCCTGCTCGCAACCATCATTATCAATATTTGGGATGTCCTCGGTGGCACCAGGGTCATC ATTCAGCTCATCGTTCCAATCTATTGACTGATAAATGGGTTTAAAAGAGAATTAATTAAGAACC ACACAGAGAAGTTATTGATTGCACAAAGTATAACATACATCAGAATATGATGGACAGTACCATA CAGAAAAAAAATGCAATGGTTAAAAGTGGTCTAAGAAATTAAAGATCTAAATTAGTGTAGAAAT TTGTCTGTAACTGGACATAAACAAAAAAAGTTTAATTGAGAAAAAATGATTAGAAACTTCCTTT AAGTAAAACACTATTTTTTGGTGACACACAGACAAGATGGCATTCTAGATATCACAATTCATTG CATGAGTAGTCAATTATTTAAAAAGAAGGTACACAAATTAAATTACCTTTACAGTGCCAAGCAT ATCATTGTCCAAGTCCCCATCAGTGCTTTCAGCTACTGTTGATGGAACGTTGGATCTGTCAAGA AGCTTTGTGATAGCATTTTCATCCCAAATAAATTTAGCAGAACCATCAGCACATCTGTCTTCAT AAACATCGCCTAGTCCACCAGTTTTTCTTTTATGCTTAAACTCAACCTCTGCTACATCATTTTT AGCACCAGAAGCTTCATTATTATCTTTAACTGCAACATCGCTATTCCTGAAGAGTTCCTCTGTT CCCCAGCGAATGATATCTTCCACTTCCTTCTGTGATTCTGATTTGTTAACAAAAAGTTGATCAA GCATCAATTTTTTCTTCGCAAGGTGCAAGATACGCTCCTCAACACTAGCACGCACGACAAGCCT GTAAACTAAAAGTCTGTTTGACTGTCCAATTCTGTGTGCTCTGTTCATTGCCTGTATATCAGCA TGTGGATTGAAATCAGAATCATATATGATAACAGTATCTGCAGTTGCCAAATTAATTCCAAGCC CACATGACCGCGTAGATAGCAGGAATACAAAACGACTCTTGTCCTGATTAAAACGAGCAATTGC TGCCTGGCGTTCTGCCACAGATACTGAACCATCCACTCTTTCAAATGTTTTCGGACCAAACTCC CAAGTCAGGTAATCTTCAAGGATGTCAAGAAGCTTTGTCATCTGAGAAAAAATAAGAACTCGAT GACCATCCTTGTGTAGGATTTTAAGCATAGAGTGCAACAAAGTTAACTTTGCTGAGGCCTTTAT TCGCATTTCATGCAAGAACTCTGGTGATCCTGATTCAGGTTCAGTTCCAGGAATAAGATACGGA TGATTGCAGACTTTCCGAAGTTGCATTACTATGTTCAACAATGACTGGTGAGCACCACCTTTCC CAATATTGCGCAATACTTGGTAGTTCTTTGTAAGCATAGCACGGTAGTATTCAGCCTGGATTGA TGTCAATTCAACAGGCACCATTCGTTCAGTCTTTGGAGGGATATTTTGCATTGCATCCTTTTTC AGTCTTCGAAGCATATGTGGAGCTACAAGGTTCTTCAGCTCCTCCACTTTCTCTGTTGTTGTAA GGTCATTGAATTTCTCCTCAAATGAAGCTAGAGAAGGGAAAGAAGCAGGTTGTAAGAAGTTCAA TAAGTTATACATTTCACCAATGTTATTCTGTAACGGAGTTCCAGTCAGCAAAACTCTATGCTGA AATGATAATGTATTGAGTAAACTGAAAAGTTTGCTGCTAGAATTCTTCAGACGATGACCCTCAT CGACTATAAGAACCTCCCATGACACAGACCGAAGATATGCAGCATCAACAAGCACCATTTCATA AGTAGTGAGCAATACATTGAACTTATGAGATTTCTTGATTTTACCCATCTGGCTTGCATCACCC TCATGCCACTCATATTGACGAATAATAGATCTTGCCCGTGCAGAACCATGATACTCCACAACAT TTAAATGAGGTGCCCATGATGCAAATTCAGCCATCCAGTTGGGCATAGTAGAAAGAGGAACCAA GACAAGACATGGCAAGTTAATCTTATATTCACAACATAGGGATGATAGAAAAGCACAGGCAGAC ACAGTCTTTCCAAGACCCATCTCATCAGCAAGGATAACATTTTTTGACTTGTACCAGCATTTGC GTAGCCAGTTCAATGCTTCCAGTTGATGAGGGAAGAGCATGCCTCCCTGGAGTTCTTTTGGCTG CTCAACCAGCATATTAAACTCTTGGTGTTCCCTTGGCTTTGCATGGCTACCTCCCTTATCCTTA TCCAAAGCCTGGGATTCAAATTTTTTGAACTGAGTGACCAAATGTGCATACTTCACCATTGTAG GTTCATCTAATCTTTCCCACGTGCATTCGTCATATGGAAGGGCACACCATTTGATCAAAGCCTC TTCTATTTCATCTAAAGAAGTGCGCAGAGCAATAACTCGTTGCGGTTGGCACCATTGTTCTTTG CAGATGTTTATCAAACCTGTTCCGTACTTTGCTTTGTAGTTTTCTAGTTTCCTTTTTGCTAATG CTTTCAGCTCAGATTCAGAAATCCAGCTGTTATGGATATTCGATTTGCCAACCCATTTAACTAA AAACTCATAAGTAGTTCCGTCGTGCTCCTTCAATTCAGTTTCTTGTATTTTCCCATGCAATTTA CTATCAGGTGTATGTTCTTGTTTAGTGTGGACTTCTGTGTCAGCTTTGGAAACTGGATGTTTGG TGTCATTCTTTTCTTCTGGAATATCAGTTACTGTCTCATATTCACCATTTACTGAAGCTGTTAC ATATGTCTGTACTGCTCCAGCATCCTTAACAGTGACGATTTGATCAGCGGAACATGCTGATGCT GTATTCATGATTTCTTTTGCGTTAAGTGATTCCTTGTGTCCATGGGATCTAACATTACTCTCCT TTTGAGCATCAGAACAATCCAAATTATTTTCCCCACCATCGTTTGCTAATTCATCAGCACATGC ATCCTCTGTCACATTAGTATCACTATTAGAAGACTGAATTTCTTCATGAAGTCCTTTTAAAAGG GCTTGACTAGGTTCTGGTGCACCGGATGCACTAGGAGGGGCCATATCAATCTGCTCTGATGAAG CATGGGCAGGTGAAATGATTTGGCTTGTCTGAAGTCGACAGCCTAGGATGCGATCAAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.407524249

Conservation Information
Conserved circRNAs	NA
PMCS	0.407524249

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							18634875-18634938(-)
18631889-18634949(-)
						
						Potential amino acid sequence
						
							MAPPSASGAPEPSQALLKGLHEEIQSSNSDTNVTEDACADELANDGGENNLDCSDAQKESNVRS
HGHKESLNAKEIMNTASACSADQIVTVKDAGAVQTYVTASVNGEYETVTDIPEEKNDTKHPVSK
ADTEVHTKQEHTPDSKLHGKIQETELKEHDGTTYEFLVKWVGKSNIHNSWISESELKALAKRKL
ENYKAKYGTGLINICKEQWCQPQRVIALRTSLDEIEEALIKWCALPYDECTWERLDEPTMVKYA
HLVTQFKKFESQALDKDKGGSHAKPREHQEFNMLVEQPKELQGGMLFPHQLEALNWLRKCWYKS
KNVILADEMGLGKTVSACAFLSSLCCEYKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHG
SARARSIIRQYEWHEGDASQMGKIKKSHKFNVLLTTYEMVLVDAAYLRSVSWEVLIVDEGHRLK
NSSSKLFSLLNTLSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNDLTTTEKV
EELKNLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNIGKGGAHQ
SLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLTLLHSMLKILHKDGHRVLIFS
QMTKLLDILEDYLTWEFGPKTFERVDGSVSVAERQAAIARFNQDKSRFVFLLSTRSCGLGINLA
TADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILHLAKKKLMLDQLFVN
KSESQKEVEDIIRWGTEELFRNSDVAVKDNNEASGAKNDVAEVEFKHKRKTGGLGDVYEDRCAD
GSAKFIWDENAITKLLDRSNVPSTVAESTDGDLDNDMLGTVKSIDWNDELNDDPGATEDIPNID
NDGCEQASEAKQDAANRVEENEWDKLLRVRLIAS*(-)
MMTLVPPRTSQILIMMVASRHLKQSRMQLIVLKKMNGINSYVSG*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	18634875-18634938(-) 18631889-18634949(-)
Potential amino acid sequence	MAPPSASGAPEPSQALLKGLHEEIQSSNSDTNVTEDACADELANDGGENNLDCSDAQKESNVRS HGHKESLNAKEIMNTASACSADQIVTVKDAGAVQTYVTASVNGEYETVTDIPEEKNDTKHPVSK ADTEVHTKQEHTPDSKLHGKIQETELKEHDGTTYEFLVKWVGKSNIHNSWISESELKALAKRKL ENYKAKYGTGLINICKEQWCQPQRVIALRTSLDEIEEALIKWCALPYDECTWERLDEPTMVKYA HLVTQFKKFESQALDKDKGGSHAKPREHQEFNMLVEQPKELQGGMLFPHQLEALNWLRKCWYKS KNVILADEMGLGKTVSACAFLSSLCCEYKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHG SARARSIIRQYEWHEGDASQMGKIKKSHKFNVLLTTYEMVLVDAAYLRSVSWEVLIVDEGHRLK NSSSKLFSLLNTLSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKFNDLTTTEKV EELKNLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNIGKGGAHQ SLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLTLLHSMLKILHKDGHRVLIFS QMTKLLDILEDYLTWEFGPKTFERVDGSVSVAERQAAIARFNQDKSRFVFLLSTRSCGLGINLA TADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILHLAKKKLMLDQLFVN KSESQKEVEDIIRWGTEELFRNSDVAVKDNNEASGAKNDVAEVEFKHKRKTGGLGDVYEDRCAD GSAKFIWDENAITKLLDRSNVPSTVAESTDGDLDNDMLGTVKSIDWNDELNDDPGATEDIPNID NDGCEQASEAKQDAANRVEENEWDKLLRVRLIAS(-) MMTLVPPRTSQILIMMVASRHLKQSRMQLIVLKKMNGINSYVSG(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015

circRNA

Detail information of Os07g0497100_circ_g.4

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