Plant Circular RNA Database

Detail information of AT2G41700_circ_g.13

			
						 General Information
					
						CircRNA Name
						AT2G41700_circ_g.13
					
						ID in PlantcircBase
						ath_circ_017860
					
						Alias
						NA
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr2: 17391731-17395863  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						PcircRNA_finder
					
						Parent gene
						
							AT2G41700						
					
						Parent gene annotation
						
							ABC transporter A family member 1
							
						Parent gene strand
						-
					
						Alternative splicing
						
							AT2G41700_circ_g.8 AT2G41700_circ_g.9 AT2G41700_circ_g.10 AT2G41700_circ_g.11 AT2G41700_circ_g.12 AT2G41700_circ_g.14 						
					
						Support reads
						1
					
						Tissues
						whole_plant
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT2G41700.2:12
AT2G41700.1:14

General Information
CircRNA Name	AT2G41700_circ_g.13
ID in PlantcircBase	ath_circ_017860
Alias	NA
Organism	Arabidpsis thaliana
Position	chr2: 17391731-17395863 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	PcircRNA_finder
Parent gene	AT2G41700
Parent gene annotation	ABC transporter A family member 1
Parent gene strand	-
Alternative splicing	AT2G41700_circ_g.8 AT2G41700_circ_g.9 AT2G41700_circ_g.10 AT2G41700_circ_g.11 AT2G41700_circ_g.12 AT2G41700_circ_g.14
Support reads	1
Tissues	whole_plant
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT2G41700.2:12 AT2G41700.1:14

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GTAAAAAACTGATATCTTACGAGTGAGCCGGGTGAATTGTGGTGTCAACCCGTGTCCTGACGGC
TATCAACAGCAACATTACAATAGTCGGAAGCAAAATtgtcagttctggaaagaggatgtcatgc
tgagggcaaacacctagttctttccgtatctcatcctaccaaaagagagtcgtatagtcagaaa
caaaaatg

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							TGTCAGTTCTGGAAAGAGGATGTCATGCTGAGGGCAAACACCTAGTTCTTTCCGTATCTCATCC
TACCAAAAGAGAGTCGTATAGTCAGAAACAAAAATGCAAGAATAGGGGAATTAACAGCATAAAA
AACATACAGATGGTATTCAACTGATGCTAGAAAACAAAAATGCATATCTTAGTAGCTTATAGGT
CAGAGTTTTTTGGTTATGCAAGAAAATTAGAGATTCAAGTAATAGCAACAGAAAAAATTTACCA
TGTTTGTTATAATACTGTTTCCAAGTATCAGGGCATCTCCAGACGTTGGGGGAAGAAGGCCAAC
AAGCATTGATATTGTTGTGCTTTTACCAGCTCCATTATGTCCTTCAAGCAAAGGAAGCACGATT
TAACGAATATATCAAGATTAGCACTATCTTTTTTCAACGTGATTTTCGTTGTTTCTGCCAATTG
AGATTGCATGCATGGTGTCATGATGTTATTGCAGAGACCAAGATTCATCAGAGACAACATTTAG
ATGACAAAGCCAGGGAATAGAAAATATCAAAAGATGTAGATAAATGTGTTATAAGAAAGCTTTT
CTCAATATGTTAAAAATGAATTTCCCAACAATGAATAAATAAAAACTGACCAAATTAGAGGAGA
TGGGAATGTTTAATAAGCAGGAAAGACATACCCAGAAGTGAAAGTATCTGGTTCTCGTATAATG
TAAGTTGCAATGAATTAACTGCACAACAATTTCCCCTTCTTGAGGCATAGACCTTATGCAGATT
TCTAACTTGTATGCACCTACAGGGCAAACATAAAAGGTAAACCAAATGTCCAGCTATGGAAACC
AATTAATTGGATTTTGTTTTTGGTTGTGATACGAATGTACCTTCCATCAAGCTCTTGTTGCCTC
ATTTCCAGGCTTATTGATTCAAAAACAGGATCAAAAGGCTCTCCCTGATTAACCTCTATATCCG
CTGGAAACATATCAGTTTCAAAACCTGGAATGCGATTTTGTAAGTTGTTTTTCTTCCTCCCAAA
ATACTTGCTGAAGATGAAGTTCCATGGGTACCGCACACCATTTTCCCTGGGGAGGACCTGAGGA
AATGAACTCTTGGATTAGGCCCAAAGATGCAGGATACAATAACGAAAAAGAAAAGATAAACCTC
CTAACTACAATTATATTTTAACAAGGAATAATGTCAAGAACAAAAGAATCAGTTCACAAAATTG
AACGTCACATAGCAGACATAAATTTACAAGACAGGCACTAAATATAGACATGTATCAAAAGGAG
GTACCTTGTCCAGATAAAGTCCAAGTGCGCAGTAAAGAATAGAGTCGAGCAACATCATTAAGAG
GCAGACAAAAAAGCTTACTCCAGAAGATGCCTGCATGAAGATTGACCAGAACAAAAGTTAAGAA
TACAAGGAGAATCAACCTTGGCCTGTAGCCACTTACATAACTACCATACCCGCCATATATTGCT
CCAACGAAGTCCAACATGTGCACGCTCATAATCAGCAAAGTTGATTGACCCAAGAGCAAATGCA
GTAGGCGAAAGCAAAGAAGCCACTACCTTCAATACCCTACAAGTCAGACAATTAATTTTACATT
AATGTATTCTAGACCAAATGGTTGTGCCAAAGATAAGCATAACTTTTGTCTATCCATAAAACAG
CCGTCACGAAAAAAATAACAAAAGTGAAAAGCACAAACATACATGGAGACAGATTCATCGTTTA
CAGTGTAGTAAGGGAAAAAGGCTCCGAGAAAGGTAAGGGTCCCAACTGCCACAGCTGTCTTTGC
TCGAGTAAAAAATGTTGATATCATAAATGAGAGCATGATTGCGCTGAGCCCAAATAAAAAGAAG
TATGTGAAGACTAAGGTCTTATCACTATACTTAAAGAGACTTCCCATCGTACAAGCTGTAATAA
TCCCAGAGCACAATGCAAACTGCAGAACAAAGTCTAGTTAGAAAAGACAAAATATACCAAGAAC
TACAAGTTATTAGATATATCAAAAGAAGTAAAGCGTCTGCTTCTTCCAGCTGAAGTCAATATTG
TTGACAACAGAAAATGCTACCATAGCCACGGGAAGAGAGGCAAACAAAAGTTCACAAGTCAAAT
TTCAAGCAGAAACTTGCCTGCAATGCATATGTGATAAACCACGACAAATGAAAGATCTCATCCT
TCAAGCCCATCATGTATAGTCCTTCTCTTATTTTCTGTTCCTGCAAGGTCAGAAAAAAAAGCGT
AAGTGATAGAAAAGCAACTATTGGTAAACGAAAGATACATATCAGCTGTGTTCCAAAGTAAGCA
AAATACATAAACCCAAACCAACCTTCTCAAAGACAGAGTAGCTGATAAGCCGGGAGATTGGAAA
CAGAAATCCCAGAAGGTACCTGCTCAACAATTATATAATCATCCAAACCATAAACACTCAAATA
CCATGCATACATGTAAGGAAAGAAAATATAGAGCAGGTGATACATACAACAATCCCATTACGCT
TTTGACAATAGATTGAAACTCATCATCAGTGTATTCACGGGTTGGAAATGGAACCATTCTTATC
ACTGAGGGGCTAAACAGTGTCCATGGCAGCTCAAAGCGTAGAGCTGAACTAAGATTTGAATGTG
ATAATGGCAAGTCGTTATTTTGCTGAGAAGCAAATATAATGAAAGAGTCTACCACCTGCTGGAG
CTGCAAAAGGGTATAAGACCAATCAAAACTGGGCGAAACCAAGATGAAACCCCCTACTTCAAGA
ATTTCTATTCAAATCAGATGAACTGATTTAGTTTACTAAATGGTAACTACTACTTTAGTGTGTG
ATAATCTAACACCTGATTTGGAATTTCTTTGACTAATCCTATATTTCCCTATAATAGCATAGAT
TATATAGTCTACAGACAAGAATTATCTGACTACTGTACTGCCTAGTAGCTTTATGGGGAGAGCT
ACAAAGATGATAGAAAAATCATGGGCACAGATTAGACAAACTTTCAATGAAAATAAGTAATGGC
CATACAGTCAAGAATCCGCTAAAGCTGTATTGCATTGTTGGTATGGTATTAATCCCCATTTCGA
GATCATTGATATAAGGTCCATTTGTGTCCATGATCGACTTGACATTTGGGAATCCTGCGAATGC
CCATGTGTGGTTCAAGCGGATGCTATAATCAAACAAATGAGGTCCTTGTTCATGGAATACCACT
GCTCCTTTTATTTTTGGATTCGAACAATTCCTAAGCAAACATGATGAGGCTTAATCAGTTTTAA
CATTTAAAAAAAAAAAAAAAACGAAAAAGCATAGACAGCTAGTTATAACTTTGATGATAGTACT
AGTGAAGATAAAATGCAGACACACTGGGCATGTGAAGCCAAAATATCTCCCTGTTTCCAACATA
GAAAAGATACCAGTCTTGTTCAGGTAGTATAATCATCAAAGTTGTAGCAAATTTGTAACAACTA
ACCCAAGGAGATACTGCCATTATTCAAGAAATGCTAACCAATTCACAGAATAAACAGAGAGATG
TACAAGAAAAAGTTTGAAGGCGACAAGAAACTAGGGATGAAATTGCCTTCTTATTAGCTGGAAA
AAAGAACAAAACATACCTCACTTCGCTACAGACACCATAATGCGCAGATGTTATATAAGTTTCC
AGCTCTATGTCATCTTTAAAAATTTTAGTAACTAGCTGCAAACAGAAGACACAGGGTCGATTAA
ACGTGTGACATATGAAGAGTAACTATCGATCTAGAATGCAGCATAAGATGAAGACGTGATGATG
ATTACCCGCAGTTCCGGAAACTTAAGAGACAAAATGTCGATCATGTTATTAGTTTCATCAGTGT
CAGGTGCAAAAGCTAAAAAATCCCCCTCAGCAAGCAAAAGCTTCAAAACTTCTGGAAAACTAGG
AGAGTTGCCTTTGCCCACTTCGACGACTGTATCTTTGTCTATGTTCCTTTCATGATCAACAGAA
CAAAATGCAGAAAACGAAATCAAAATCCAATTTTAGTACGAGAGAGAGAGAGGCTAGTGACGAG
TGTAAAAAACTGATATCTTACGAGTGAGCCGGGTGAATTGTGGTGTCAACCCGTGTCCTGACGG
CTATCAACAGCAACATTACAATAGTCGGAAGCAAAAT
						
					

			
		

Sequences
Splice junction sequence	GTAAAAAACTGATATCTTACGAGTGAGCCGGGTGAATTGTGGTGTCAACCCGTGTCCTGACGGC TATCAACAGCAACATTACAATAGTCGGAAGCAAAATtgtcagttctggaaagaggatgtcatgc tgagggcaaacacctagttctttccgtatctcatcctaccaaaagagagtcgtatagtcagaaa caaaaatg
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	TGTCAGTTCTGGAAAGAGGATGTCATGCTGAGGGCAAACACCTAGTTCTTTCCGTATCTCATCC TACCAAAAGAGAGTCGTATAGTCAGAAACAAAAATGCAAGAATAGGGGAATTAACAGCATAAAA AACATACAGATGGTATTCAACTGATGCTAGAAAACAAAAATGCATATCTTAGTAGCTTATAGGT CAGAGTTTTTTGGTTATGCAAGAAAATTAGAGATTCAAGTAATAGCAACAGAAAAAATTTACCA TGTTTGTTATAATACTGTTTCCAAGTATCAGGGCATCTCCAGACGTTGGGGGAAGAAGGCCAAC AAGCATTGATATTGTTGTGCTTTTACCAGCTCCATTATGTCCTTCAAGCAAAGGAAGCACGATT TAACGAATATATCAAGATTAGCACTATCTTTTTTCAACGTGATTTTCGTTGTTTCTGCCAATTG AGATTGCATGCATGGTGTCATGATGTTATTGCAGAGACCAAGATTCATCAGAGACAACATTTAG ATGACAAAGCCAGGGAATAGAAAATATCAAAAGATGTAGATAAATGTGTTATAAGAAAGCTTTT CTCAATATGTTAAAAATGAATTTCCCAACAATGAATAAATAAAAACTGACCAAATTAGAGGAGA TGGGAATGTTTAATAAGCAGGAAAGACATACCCAGAAGTGAAAGTATCTGGTTCTCGTATAATG TAAGTTGCAATGAATTAACTGCACAACAATTTCCCCTTCTTGAGGCATAGACCTTATGCAGATT TCTAACTTGTATGCACCTACAGGGCAAACATAAAAGGTAAACCAAATGTCCAGCTATGGAAACC AATTAATTGGATTTTGTTTTTGGTTGTGATACGAATGTACCTTCCATCAAGCTCTTGTTGCCTC ATTTCCAGGCTTATTGATTCAAAAACAGGATCAAAAGGCTCTCCCTGATTAACCTCTATATCCG CTGGAAACATATCAGTTTCAAAACCTGGAATGCGATTTTGTAAGTTGTTTTTCTTCCTCCCAAA ATACTTGCTGAAGATGAAGTTCCATGGGTACCGCACACCATTTTCCCTGGGGAGGACCTGAGGA AATGAACTCTTGGATTAGGCCCAAAGATGCAGGATACAATAACGAAAAAGAAAAGATAAACCTC CTAACTACAATTATATTTTAACAAGGAATAATGTCAAGAACAAAAGAATCAGTTCACAAAATTG AACGTCACATAGCAGACATAAATTTACAAGACAGGCACTAAATATAGACATGTATCAAAAGGAG GTACCTTGTCCAGATAAAGTCCAAGTGCGCAGTAAAGAATAGAGTCGAGCAACATCATTAAGAG GCAGACAAAAAAGCTTACTCCAGAAGATGCCTGCATGAAGATTGACCAGAACAAAAGTTAAGAA TACAAGGAGAATCAACCTTGGCCTGTAGCCACTTACATAACTACCATACCCGCCATATATTGCT CCAACGAAGTCCAACATGTGCACGCTCATAATCAGCAAAGTTGATTGACCCAAGAGCAAATGCA GTAGGCGAAAGCAAAGAAGCCACTACCTTCAATACCCTACAAGTCAGACAATTAATTTTACATT AATGTATTCTAGACCAAATGGTTGTGCCAAAGATAAGCATAACTTTTGTCTATCCATAAAACAG CCGTCACGAAAAAAATAACAAAAGTGAAAAGCACAAACATACATGGAGACAGATTCATCGTTTA CAGTGTAGTAAGGGAAAAAGGCTCCGAGAAAGGTAAGGGTCCCAACTGCCACAGCTGTCTTTGC TCGAGTAAAAAATGTTGATATCATAAATGAGAGCATGATTGCGCTGAGCCCAAATAAAAAGAAG TATGTGAAGACTAAGGTCTTATCACTATACTTAAAGAGACTTCCCATCGTACAAGCTGTAATAA TCCCAGAGCACAATGCAAACTGCAGAACAAAGTCTAGTTAGAAAAGACAAAATATACCAAGAAC TACAAGTTATTAGATATATCAAAAGAAGTAAAGCGTCTGCTTCTTCCAGCTGAAGTCAATATTG TTGACAACAGAAAATGCTACCATAGCCACGGGAAGAGAGGCAAACAAAAGTTCACAAGTCAAAT TTCAAGCAGAAACTTGCCTGCAATGCATATGTGATAAACCACGACAAATGAAAGATCTCATCCT TCAAGCCCATCATGTATAGTCCTTCTCTTATTTTCTGTTCCTGCAAGGTCAGAAAAAAAAGCGT AAGTGATAGAAAAGCAACTATTGGTAAACGAAAGATACATATCAGCTGTGTTCCAAAGTAAGCA AAATACATAAACCCAAACCAACCTTCTCAAAGACAGAGTAGCTGATAAGCCGGGAGATTGGAAA CAGAAATCCCAGAAGGTACCTGCTCAACAATTATATAATCATCCAAACCATAAACACTCAAATA CCATGCATACATGTAAGGAAAGAAAATATAGAGCAGGTGATACATACAACAATCCCATTACGCT TTTGACAATAGATTGAAACTCATCATCAGTGTATTCACGGGTTGGAAATGGAACCATTCTTATC ACTGAGGGGCTAAACAGTGTCCATGGCAGCTCAAAGCGTAGAGCTGAACTAAGATTTGAATGTG ATAATGGCAAGTCGTTATTTTGCTGAGAAGCAAATATAATGAAAGAGTCTACCACCTGCTGGAG CTGCAAAAGGGTATAAGACCAATCAAAACTGGGCGAAACCAAGATGAAACCCCCTACTTCAAGA ATTTCTATTCAAATCAGATGAACTGATTTAGTTTACTAAATGGTAACTACTACTTTAGTGTGTG ATAATCTAACACCTGATTTGGAATTTCTTTGACTAATCCTATATTTCCCTATAATAGCATAGAT TATATAGTCTACAGACAAGAATTATCTGACTACTGTACTGCCTAGTAGCTTTATGGGGAGAGCT ACAAAGATGATAGAAAAATCATGGGCACAGATTAGACAAACTTTCAATGAAAATAAGTAATGGC CATACAGTCAAGAATCCGCTAAAGCTGTATTGCATTGTTGGTATGGTATTAATCCCCATTTCGA GATCATTGATATAAGGTCCATTTGTGTCCATGATCGACTTGACATTTGGGAATCCTGCGAATGC CCATGTGTGGTTCAAGCGGATGCTATAATCAAACAAATGAGGTCCTTGTTCATGGAATACCACT GCTCCTTTTATTTTTGGATTCGAACAATTCCTAAGCAAACATGATGAGGCTTAATCAGTTTTAA CATTTAAAAAAAAAAAAAAAACGAAAAAGCATAGACAGCTAGTTATAACTTTGATGATAGTACT AGTGAAGATAAAATGCAGACACACTGGGCATGTGAAGCCAAAATATCTCCCTGTTTCCAACATA GAAAAGATACCAGTCTTGTTCAGGTAGTATAATCATCAAAGTTGTAGCAAATTTGTAACAACTA ACCCAAGGAGATACTGCCATTATTCAAGAAATGCTAACCAATTCACAGAATAAACAGAGAGATG TACAAGAAAAAGTTTGAAGGCGACAAGAAACTAGGGATGAAATTGCCTTCTTATTAGCTGGAAA AAAGAACAAAACATACCTCACTTCGCTACAGACACCATAATGCGCAGATGTTATATAAGTTTCC AGCTCTATGTCATCTTTAAAAATTTTAGTAACTAGCTGCAAACAGAAGACACAGGGTCGATTAA ACGTGTGACATATGAAGAGTAACTATCGATCTAGAATGCAGCATAAGATGAAGACGTGATGATG ATTACCCGCAGTTCCGGAAACTTAAGAGACAAAATGTCGATCATGTTATTAGTTTCATCAGTGT CAGGTGCAAAAGCTAAAAAATCCCCCTCAGCAAGCAAAAGCTTCAAAACTTCTGGAAAACTAGG AGAGTTGCCTTTGCCCACTTCGACGACTGTATCTTTGTCTATGTTCCTTTCATGATCAACAGAA CAAAATGCAGAAAACGAAATCAAAATCCAATTTTAGTACGAGAGAGAGAGAGGCTAGTGACGAG TGTAAAAAACTGATATCTTACGAGTGAGCCGGGTGAATTGTGGTGTCAACCCGTGTCCTGACGG CTATCAACAGCAACATTACAATAGTCGGAAGCAAAAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.11873957

Conservation Information
Conserved circRNAs	NA
PMCS	0.11873957

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							17395843-17391733(-)
						
					

						Potential amino acid sequence
						
							MLLLIAVRTRVDTTIHPAHSNIDKDTVVEVGKGNSPSFPEVLKLLLAEGDFLAFAPDTDETNNM
IDILSLKFPELRLVTKIFKDDIELETYITSAHYGVCSEVRNCSNPKIKGAVVFHEQGPHLFDYS
IRLNHTWAFAGFPNVKSIMDTNGPYINDLEMGINTIPTMQYSFSGFLTLQQVVDSFIIFASQQN
NDLPLSHSNLSSALRFELPWTLFSPSVIRMVPFPTREYTDDEFQSIVKSVMGLLYLLGFLFPIS
RLISYSVFEKEQKIREGLYMMGLKDEIFHLSWFITYALQFALCSGIITACTMGSLFKYSDKTLV
FTYFFLFGLSAIMLSFMISTFFTRAKTAVAVGTLTFLGAFFPYYTVNDESVSMVLKVVASLLSP
TAFALGSINFADYERAHVGLRWSNIWRASSGVSFFVCLLMMLLDSILYCALGLYLDKVLPRENG
VRYPWNFIFSKYFGRKKNNLQNRIPGFETDMFPADIEVNQGEPFDPVFESISLEMRQQELDGRC
IQVRNLHKVYASRRGNCCAVNSLQLTLYENQILSLLGHNGAGKSTTISMLVGLLPPTSGDALIL
GNSIITNMDEIRKELGVCPQHDILFPELTILLPTIVMLLLIAVRTRVDTTIHPAHSNIDKDTVV
EVGKGNSPSFPEVLKLLLAEGDFLAFAPDTDETNNMIDILSLKFPELRLVTKIFKDDIELETYI
TSAHYGVCSEVRNCSNPKIKGAVVFHEQGPHLFDYSIRLNHTWAFAGFPNVKSIMDTNGPYIND
LEMGINTIPTMQYSFSGFLTLQQVVDSFIIFASQQNNDLPLSHSNLSSALRFELPWTLFSPSVI
RMVPFPTREYTDDEFQSIVKSVMGLLYLLGFLFPISRLISYSVFEKEQKIREGLYMMGLKDEIF
HLSWFITYALQFALCSGIITACTMGSLFKYSDKTLVFTYFFLFGLSAIMLSFMISTFFTRAKTA
VAVGTLTFLGAFFPYYTVNDESVSMVLKVVASLLSPTAFALGSINFADYERAHVGLRWSNIWRA
SSGVSFFVCLLMMLLDSILYCALGLYLDKVLPRENGVRYPWNFIFSKYFGRKKNNLQNRIPGFE
TDMFPADIEVNQGEPFDPVFESISLEMRQQELDGRCIQVRNLHKVYASRRGNCCAVNSLQLTLY
ENQILSLLGHNGAGKSTTISMLVGLLPPTSGDALILGNSIITNMDEIRKELGVCPQHDILFPEL
TILLPTIVMLLLIAVRTRVDTTIHPAHSNIDKDTVVEVGKGNSPSFPEVLKLLLAEGDFLAFAP
DTDETNNMIDILSLKFPELRLVTKIFKDDIELETYITSAHYGVCSEVRNCSNPKIKGAVVFHEQ
GPHLFDYSIRLNHTWAFAGFPNVKSIMDTNGPYINDLEMGINTIPTMQYSFSGFLTLQQVVDSF
IIFASQQNNDLPLSHSNLSSALRFELPWTLFSPSVIRMVPFPTREYTDDEFQSIVKSVMGLLYL
LGFLFPISRLISYSVFEKEQKIREGLYMMGLKDEIFHLSWFITYALQFALCSGIITACTMGSLF
KYSDKTLVFTYFFLFGLSAIMLSFMISTFFTRAKTAVAVGTLTFLGAFFPYYTVNDESVSMVLK
VVASLLSPTAFALGSINFADYERAHVGLRWSNIWRASSGVSFFVCLLMMLLDSILYCALGLYLD
KVLPRENGVRYPWNFIFSKYFGRKKNNLQNRIPGFETDMFPADIEVNQGEPFDPVFESISLEMR
QQELDGRCIQVRNLHKVYASRRGNCCAVNSLQLTLYENQILSLLGHNGAGKSTTISMLVGLLPP
TSGDALILGNSIITNMDEIRKELGVCPQHDILFPELTILLPTIVMLLLIAVRTRVDTTIHPAHS
NIDKDTVVEVGKGNSPSFPEVLKLLLAEGDFLAFAPDTDETNNMIDILSLKFPELRLVTKIFKD
DIELETYITSAHYGVCSEVRNCSNPKIKGAVVFHEQGPHLFDYSIRLNHTWAFAGFPNVKSIMD
TNGPYINDLEMGINTIPTMQYSFSGFLTLQQVVDSFIIFASQQNNDLPLSHSNLSSALRFELPW
TLFSPSVIRMVPFPTREYTDDEFQSIVKSVMGLLYLLGFLFPISRLISYSVFEKEQKIREGLYM
MGLKDEIFHLSWFITYALQFALCSGIITACTMGSLFKYSDKTLVFTYFFLFGLSAIMLSFMIST
FFTRAKTAVAVGTLTFLGAFFPYYTVNDESVSMVLKVVASLLSPTAFALGSINFADYERAHVGL
RWSNIWRASSGVSFFVCLLMMLLDSILYCALGLYLDKVLPRENGVRYPWNFIFSKYFGRKKNNL
QNRIPGFETDMFPADIEVNQGEPFDPVFESISLEMRQQELDGRCIQVRNLHKVYASRRGNCCAV
NSLQLTLYENQILSLLGHNGAGKSTTISMLVGLLPPTSGDALILGNSIITNMDEIRKELGVCPQ
HDILFPELT(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	17395843-17391733(-)
Potential amino acid sequence	MLLLIAVRTRVDTTIHPAHSNIDKDTVVEVGKGNSPSFPEVLKLLLAEGDFLAFAPDTDETNNM IDILSLKFPELRLVTKIFKDDIELETYITSAHYGVCSEVRNCSNPKIKGAVVFHEQGPHLFDYS IRLNHTWAFAGFPNVKSIMDTNGPYINDLEMGINTIPTMQYSFSGFLTLQQVVDSFIIFASQQN NDLPLSHSNLSSALRFELPWTLFSPSVIRMVPFPTREYTDDEFQSIVKSVMGLLYLLGFLFPIS RLISYSVFEKEQKIREGLYMMGLKDEIFHLSWFITYALQFALCSGIITACTMGSLFKYSDKTLV FTYFFLFGLSAIMLSFMISTFFTRAKTAVAVGTLTFLGAFFPYYTVNDESVSMVLKVVASLLSP TAFALGSINFADYERAHVGLRWSNIWRASSGVSFFVCLLMMLLDSILYCALGLYLDKVLPRENG VRYPWNFIFSKYFGRKKNNLQNRIPGFETDMFPADIEVNQGEPFDPVFESISLEMRQQELDGRC IQVRNLHKVYASRRGNCCAVNSLQLTLYENQILSLLGHNGAGKSTTISMLVGLLPPTSGDALIL GNSIITNMDEIRKELGVCPQHDILFPELTILLPTIVMLLLIAVRTRVDTTIHPAHSNIDKDTVV EVGKGNSPSFPEVLKLLLAEGDFLAFAPDTDETNNMIDILSLKFPELRLVTKIFKDDIELETYI TSAHYGVCSEVRNCSNPKIKGAVVFHEQGPHLFDYSIRLNHTWAFAGFPNVKSIMDTNGPYIND LEMGINTIPTMQYSFSGFLTLQQVVDSFIIFASQQNNDLPLSHSNLSSALRFELPWTLFSPSVI RMVPFPTREYTDDEFQSIVKSVMGLLYLLGFLFPISRLISYSVFEKEQKIREGLYMMGLKDEIF HLSWFITYALQFALCSGIITACTMGSLFKYSDKTLVFTYFFLFGLSAIMLSFMISTFFTRAKTA VAVGTLTFLGAFFPYYTVNDESVSMVLKVVASLLSPTAFALGSINFADYERAHVGLRWSNIWRA SSGVSFFVCLLMMLLDSILYCALGLYLDKVLPRENGVRYPWNFIFSKYFGRKKNNLQNRIPGFE TDMFPADIEVNQGEPFDPVFESISLEMRQQELDGRCIQVRNLHKVYASRRGNCCAVNSLQLTLY ENQILSLLGHNGAGKSTTISMLVGLLPPTSGDALILGNSIITNMDEIRKELGVCPQHDILFPEL TILLPTIVMLLLIAVRTRVDTTIHPAHSNIDKDTVVEVGKGNSPSFPEVLKLLLAEGDFLAFAP DTDETNNMIDILSLKFPELRLVTKIFKDDIELETYITSAHYGVCSEVRNCSNPKIKGAVVFHEQ GPHLFDYSIRLNHTWAFAGFPNVKSIMDTNGPYINDLEMGINTIPTMQYSFSGFLTLQQVVDSF IIFASQQNNDLPLSHSNLSSALRFELPWTLFSPSVIRMVPFPTREYTDDEFQSIVKSVMGLLYL LGFLFPISRLISYSVFEKEQKIREGLYMMGLKDEIFHLSWFITYALQFALCSGIITACTMGSLF KYSDKTLVFTYFFLFGLSAIMLSFMISTFFTRAKTAVAVGTLTFLGAFFPYYTVNDESVSMVLK VVASLLSPTAFALGSINFADYERAHVGLRWSNIWRASSGVSFFVCLLMMLLDSILYCALGLYLD KVLPRENGVRYPWNFIFSKYFGRKKNNLQNRIPGFETDMFPADIEVNQGEPFDPVFESISLEMR QQELDGRCIQVRNLHKVYASRRGNCCAVNSLQLTLYENQILSLLGHNGAGKSTTISMLVGLLPP TSGDALILGNSIITNMDEIRKELGVCPQHDILFPELTILLPTIVMLLLIAVRTRVDTTIHPAHS NIDKDTVVEVGKGNSPSFPEVLKLLLAEGDFLAFAPDTDETNNMIDILSLKFPELRLVTKIFKD DIELETYITSAHYGVCSEVRNCSNPKIKGAVVFHEQGPHLFDYSIRLNHTWAFAGFPNVKSIMD TNGPYINDLEMGINTIPTMQYSFSGFLTLQQVVDSFIIFASQQNNDLPLSHSNLSSALRFELPW TLFSPSVIRMVPFPTREYTDDEFQSIVKSVMGLLYLLGFLFPISRLISYSVFEKEQKIREGLYM MGLKDEIFHLSWFITYALQFALCSGIITACTMGSLFKYSDKTLVFTYFFLFGLSAIMLSFMIST FFTRAKTAVAVGTLTFLGAFFPYYTVNDESVSMVLKVVASLLSPTAFALGSINFADYERAHVGL RWSNIWRASSGVSFFVCLLMMLLDSILYCALGLYLDKVLPRENGVRYPWNFIFSKYFGRKKNNL QNRIPGFETDMFPADIEVNQGEPFDPVFESISLEMRQQELDGRCIQVRNLHKVYASRRGNCCAV NSLQLTLYENQILSLLGHNGAGKSTTISMLVGLLPPTSGDALILGNSIITNMDEIRKELGVCPQ HDILFPELT(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of AT2G41700_circ_g.13

Address

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