Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Solyc10g018300.1_circ_g.3 |
ID in PlantcircBase | sly_circ_003072 |
Alias | SL3.0ch10:7331272|7332405 |
Organism | Solanum lycopersicum |
Position | chr10: 7365355-7366488 JBrowse» |
Reference genome | SL2.50.38 |
Type | ei-circRNA |
Identification method | CIRI; find_circ |
Parent gene | Solyc10g018300.1 |
Parent gene annotation |
protein_coding |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | NA |
Tissues | leaf |
Exon boundary | No-Yes |
Splicing signals | CT-TA |
Number of exons covered | Solyc10g018300.1.1:4 |
Conservation Information | |
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Conserved circRNAs | osa_circ_023224 |
PMCS | 0.343310553 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to low-temperature stress |
Other Information | |
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References | Yang et al., 2020 |