Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d015785_circ_g.1 |
ID in PlantcircBase | zma_circ_008644 |
Alias | Zm05circ00074 |
Organism | Zea mays |
Position | chr5: 119215791-119216067 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | CIRI2 |
Parent gene | Zm00001d015785 |
Parent gene annotation |
Sec14p-like phosphatidylinositol transfer family protein |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | NA |
Tissues | leaf, endosperm |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d015785_T005:2 Zm00001d015785_T004:1 Zm00001d015785_T003:1 Zm00001d015785_T002:1 Zm00001d015785_T007:1 Zm00001d015785_T006:2 Zm00001d015785_T001:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.120336943 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Han et al., 2020 |