Plant Circular RNA Database

Detail information of AT4G39420_circ_g.8

			
						 General Information
					
						CircRNA Name
						AT4G39420_circ_g.8
					
						ID in PlantcircBase
						ath_circ_035691
					
						Alias
						At_ciR5625
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr4: 18348217-18351023  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							AT4G39420						
					
						Parent gene annotation
						
							unknown protein
							
						Parent gene strand
						+
					
						Alternative splicing
						
							AT4G39420_circ_g.7 AT4G39420_circ_g.9 AT4G39420_circ_g.10 AT4G39420_circ_g.11 AT4G39420_circ_g.12 AT4G39420_circ_g.13 						
					
						Support reads
						2
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT4G39420.1:6
AT4G39420.2:6
AT4G39420.3:6
AT4G39420.4:6

General Information
CircRNA Name	AT4G39420_circ_g.8
ID in PlantcircBase	ath_circ_035691
Alias	At_ciR5625
Organism	Arabidpsis thaliana
Position	chr4: 18348217-18351023 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	find_circ
Parent gene	AT4G39420
Parent gene annotation	unknown protein
Parent gene strand	+
Alternative splicing	AT4G39420_circ_g.7 AT4G39420_circ_g.9 AT4G39420_circ_g.10 AT4G39420_circ_g.11 AT4G39420_circ_g.12 AT4G39420_circ_g.13
Support reads	2
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT4G39420.1:6 AT4G39420.2:6 AT4G39420.3:6 AT4G39420.4:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AAAGAACAGGCAATGGGAGCAAGCAAGAAACTGGGCCAAGCAACTTGAAACCATTGGTGCCACT
TGGACATCCTCTGTACATCATGTTACTGAAACACAGggaaccgagcttggacttgagcacttcc
tgcatcgtggacggccactcgcagcttttaatgcttttctggaacatagagttgaaaagttaaa
actggaag

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 2028
Transcript exons: 18348217-18348417,18348524-18349084,18349165-18349224,18
349316-18349641,18349814-18350228,18350559-18351023
GGAACCGAGCTTGGACTTGAGCACTTCCTGCATCGTGGACGGCCACTCGCAGCTTTTAATGCTT
TTCTGGAACATAGAGTTGAAAAGTTAAAACTGGAAGATCAATCTGGCTCTTCGATACATGGACA
AAGAAATATGCAGTCAGATGTTCCGATGCTACTTGCACCTCTGACGCAGAGTGATGAGTCACTT
CTTTCATCTGTCATACCACTTGCTATCACACACTTTGGGGATTCTGTGTTGGTGGCTTCGTGTG
CCTTCCTTCTTGAGCTTTGTGGTTTATCTGCTAGCATGCTTCGGATAGACGTTGCATCCTTGAG
AAGAATATCATCCTTCTATAAATCAAATGGTAATGCGGATATGGCACATCAGAAATCGCTGAAG
CGCTCAATGTTTCATAGTGTATCTAGTGAAGATGATCTAATGGGGTCACTAGCTAGGGCCCTTG
CTAACGAATACGCTTATCCTGATATTTCAAGTGTCCCTAAGCAAAAACAGAATCCAAGTATTTC
TGGTAGTCAACCCGGTCTTCCGCTAATGCTTGTTCTTCATCATTTGGAACAAGCTAGTCTTCCA
GAGATTGGAGTAGGTAGAAAAACAAGTGGATACTGGCTGTTAACAGGTGATGGTGATGGGTCTG
AACTGCGGTCTCAACAGACATCTGCTAGCTTGCATTGGAGTTTAGTTACTCTTTTTTGTCAGAT
GCATAAGATTCCTCTGAGCACCAAATATCTTGCCATGCTAGCAAGAGACAATGATTGGGTTGGA
TTTTTATCTGAGGCGCAGCTTGGAGGATACCCATTTGATACAGTGCTCAATGTGGCATCGAAGG
AGTTTGGTGATCAACGTTTAAAAGCTCACATACTGACTGTTTTGAGATATGCCAACTCAAAAAA
GAAAGCCACCACATCGTTCTCAGATGACCCAAGCAGAGGACTTTCATGTTCCCCCTCAGAGGGT
GGAGCTTATGTCTCTGCTGAACTCTTTCGTGTTTTGGCATACTCTGAGAAGCTAAAGAATCCTG
GGGAATACCTTTTGTCAAAAGCTAAGGAATTCTCGTGGTCTATTTTGGCTCTCATAGCATCATG
CTTTCCGGATGTTTCTCCTTTATCATGCCTAACAATTTGGTTGGAAATTACCGCAGCCAGGGAA
ACGTCGTCTATCAAGGTGAACGATATAACGACTAAAATAGCTGAAAATATAGGAGCAGCTGTTG
TATCTACAAATTCCTTGCCGACGGATGCTAGAGGTGTCCAGTTTCATTACAATAGGAGGAATCC
CAAACGGAGACGACTTACTGCACATACATCTGTGGATTTATTGGCTTCAGCCAATAGTTTAAAC
ATCTCTGCTGGTAAAACATTTTGTTCTCATAGAACAGAAGCTGCAGAAGATGAAAAAGCGGAAG
ATAGCAGTGTTATTGATGATTCGTCTGATGAGCATGCGTCTCTATCAAAAATGGTCGCAGTGCT
TTGTGAACAACGCTTGTTTCTTCCTCTGCTAAAAGCTTTTGACTTGTTCCTCCCGTCCTGCTCT
CTACTGCCATTTTTCCGTGCTCTTCAGGCATTTTCTCAAATGCGCCTGTCTGAAGCTTCAGCAC
ATCTGGGTTCTTTTTGGGGTAGAGTTAAAGAGGAATCAATGCATTTTCAGTCAAATACAGCCAA
AGATGTCAATTTTGGGGCATCTTGGATCAGCAGAACAGCTGTTAAGGCTGCTGATGCTGTTTTG
TCAGCTTGTCCATCTCCATATGAGAAAAGATGCTTACTACAACTTCTTGCTGCAACTGATTTTG
GTGATGGGGGATCTGCGGCAACATATTATCGGCGTCTTTATTGGAAAGTTAACTTGGCTGAGCC
ATCACTCCGGGAGAATGATCTTGACTTAGGAAATGAGTCCCTTGATGATGGCTCTCTTCTGACA
GCTTTAGAAAAGAACAGGCAATGGGAGCAAGCAAGAAACTGGGCCAAGCAACTTGAAACCATTG
GTGCCACTTGGACATCCTCTGTACATCATGTTACTGAAACACAG
						
					

						Genomic sequence
						
							GGAACCGAGCTTGGACTTGAGCACTTCCTGCATCGTGGACGGCCACTCGCAGCTTTTAATGCTT
TTCTGGAACATAGAGTTGAAAAGTTAAAACTGGAAGATCAATCTGGCTCTTCGATACATGGACA
AAGAAATATGCAGTCAGATGTTCCGATGCTACTTGCACCTCTGACGCAGAGTGATGAGTCACTT
CTTTCATCTGTACGTGCCGGTCACCTTACCATTACTAGCTTAAATTTCATTCGACATATCTGCA
TCGCTTTTATGCTGTCTATTTATGTCTGCATGACTGTTGCTTTACCTTCAGGTCATACCACTTG
CTATCACACACTTTGGGGATTCTGTGTTGGTGGCTTCGTGTGCCTTCCTTCTTGAGCTTTGTGG
TTTATCTGCTAGCATGCTTCGGATAGACGTTGCATCCTTGAGAAGAATATCATCCTTCTATAAA
TCAAATGGTAATGCGGATATGGCACATCAGAAATCGCTGAAGCGCTCAATGTTTCATAGTGTAT
CTAGTGAAGATGATCTAATGGGGTCACTAGCTAGGGCCCTTGCTAACGAATACGCTTATCCTGA
TATTTCAAGTGTCCCTAAGCAAAAACAGAATCCAAGTATTTCTGGTAGTCAACCCGGTCTTCCG
CTAATGCTTGTTCTTCATCATTTGGAACAAGCTAGTCTTCCAGAGATTGGAGTAGGTAGAAAAA
CAAGTGGATACTGGCTGTTAACAGGTGATGGTGATGGGTCTGAACTGCGGTCTCAACAGACATC
TGCTAGCTTGCATTGGAGTTTAGTTACTCTTTTTTGTCAGATGCATAAGATTCCTCTGAGCACC
AAATATCTTGCCATGCTAGCAAGAGACAATGATTGGGTATGCTTCATGATAATTCTTCTTACCT
TTTCGTTTCTTACCCTTGAGCTATTACTTGTCCTAATATACGTAAATATCAGGTTGGATTTTTA
TCTGAGGCGCAGCTTGGAGGATACCCATTTGATACAGTGCTCAATGTGGTACGTCTCTCACTCC
TTACTGGTTTCAGAAATCACAAACAGCAACTTAATGTGCTATGTTACAATTATATGACACATTT
TCATCTATCAGGCATCGAAGGAGTTTGGTGATCAACGTTTAAAAGCTCACATACTGACTGTTTT
GAGATATGCCAACTCAAAAAAGAAAGCCACCACATCGTTCTCAGATGACCCAAGCAGAGGACTT
TCATGTTCCCCCTCAGAGGGTGGAGCTTATGTCTCTGCTGAACTCTTTCGTGTTTTGGCATACT
CTGAGAAGCTAAAGAATCCTGGGGAATACCTTTTGTCAAAAGCTAAGGAATTCTCGTGGTCTAT
TTTGGCTCTCATAGCATCATGCTTTCCGGATGTTTCTCCTTTATCATGCCTAACAATTTGGTTG
GAAATTACCGCAGCCAGGTGTGACAAAATTTAATGAAATTCAATTGGGTTGGGTGTAATAGTAG
TAATTTACTATCTTAATGCAAGTCTATATAACATTGGGCGTTTTAAACTCTTTTTCTTGCATGT
TTTCTGGAATAAAAAGATGCATAACTTTTTTCTTAGCTCTAACAAAGATCATGCTTTTCAGGGA
AACGTCGTCTATCAAGGTGAACGATATAACGACTAAAATAGCTGAAAATATAGGAGCAGCTGTT
GTATCTACAAATTCCTTGCCGACGGATGCTAGAGGTGTCCAGTTTCATTACAATAGGAGGAATC
CCAAACGGAGACGACTTACTGCACATACATCTGTGGATTTATTGGCTTCAGCCAATAGTTTAAA
CATCTCTGCTGGTAAAACATTTTGTTCTCATAGAACAGAAGCTGCAGAAGATGAAAAAGCGGAA
GATAGCAGTGTTATTGATGATTCGTCTGATGAGCATGCGTCTCTATCAAAAATGGTCGCAGTGC
TTTGTGAACAACGCTTGTTTCTTCCTCTGCTAAAAGCTTTTGACTTGTTCCTCCCGTCCTGCTC
TCTACTGCCATTTTTCCGTGCTCTTCAGGTTTGTCTTACATTTTAACCCACTATTTGCCTTCTC
TGTTTTCTGTTCCCGGCCTTGATTGTCTGTTTAAAATAACTTTTACACGATACATGTTCATGGG
TCTGATGCTGTTTGATAATTTTTTCACCATGAACATCTGTTTTCTTTTTCATATGTTTTGCTGT
GGGAGAAAAACTGATGATGCAATTCTGCAAAAGTTCTAGACTAAGAATTTGTAAAATGCTCTGG
GTTTTTGTCAAATGCTTAGTTTCTTCTGCCTCATTTTACTTTTCGTGGGGTGAATGCAGATATC
TTCATAGGGTTTTGAGCTGTCTTAATTCTTTTCTGCAGGCATTTTCTCAAATGCGCCTGTCTGA
AGCTTCAGCACATCTGGGTTCTTTTTGGGGTAGAGTTAAAGAGGAATCAATGCATTTTCAGTCA
AATACAGCCAAAGATGTCAATTTTGGGGCATCTTGGATCAGCAGAACAGCTGTTAAGGCTGCTG
ATGCTGTTTTGTCAGCTTGTCCATCTCCATATGAGAAAAGATGCTTACTACAACTTCTTGCTGC
AACTGATTTTGGTGATGGGGGATCTGCGGCAACATATTATCGGCGTCTTTATTGGAAAGTTAAC
TTGGCTGAGCCATCACTCCGGGAGAATGATCTTGACTTAGGAAATGAGTCCCTTGATGATGGCT
CTCTTCTGACAGCTTTAGAAAAGAACAGGCAATGGGAGCAAGCAAGAAACTGGGCCAAGCAACT
TGAAACCATTGGTGCCACTTGGACATCCTCTGTACATCATGTTACTGAAACACAG
						
					

			
		

Sequences
Splice junction sequence	AAAGAACAGGCAATGGGAGCAAGCAAGAAACTGGGCCAAGCAACTTGAAACCATTGGTGCCACT TGGACATCCTCTGTACATCATGTTACTGAAACACAGggaaccgagcttggacttgagcacttcc tgcatcgtggacggccactcgcagcttttaatgcttttctggaacatagagttgaaaagttaaa actggaag
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 2028 Transcript exons: 18348217-18348417,18348524-18349084,18349165-18349224,18 349316-18349641,18349814-18350228,18350559-18351023 GGAACCGAGCTTGGACTTGAGCACTTCCTGCATCGTGGACGGCCACTCGCAGCTTTTAATGCTT TTCTGGAACATAGAGTTGAAAAGTTAAAACTGGAAGATCAATCTGGCTCTTCGATACATGGACA AAGAAATATGCAGTCAGATGTTCCGATGCTACTTGCACCTCTGACGCAGAGTGATGAGTCACTT CTTTCATCTGTCATACCACTTGCTATCACACACTTTGGGGATTCTGTGTTGGTGGCTTCGTGTG CCTTCCTTCTTGAGCTTTGTGGTTTATCTGCTAGCATGCTTCGGATAGACGTTGCATCCTTGAG AAGAATATCATCCTTCTATAAATCAAATGGTAATGCGGATATGGCACATCAGAAATCGCTGAAG CGCTCAATGTTTCATAGTGTATCTAGTGAAGATGATCTAATGGGGTCACTAGCTAGGGCCCTTG CTAACGAATACGCTTATCCTGATATTTCAAGTGTCCCTAAGCAAAAACAGAATCCAAGTATTTC TGGTAGTCAACCCGGTCTTCCGCTAATGCTTGTTCTTCATCATTTGGAACAAGCTAGTCTTCCA GAGATTGGAGTAGGTAGAAAAACAAGTGGATACTGGCTGTTAACAGGTGATGGTGATGGGTCTG AACTGCGGTCTCAACAGACATCTGCTAGCTTGCATTGGAGTTTAGTTACTCTTTTTTGTCAGAT GCATAAGATTCCTCTGAGCACCAAATATCTTGCCATGCTAGCAAGAGACAATGATTGGGTTGGA TTTTTATCTGAGGCGCAGCTTGGAGGATACCCATTTGATACAGTGCTCAATGTGGCATCGAAGG AGTTTGGTGATCAACGTTTAAAAGCTCACATACTGACTGTTTTGAGATATGCCAACTCAAAAAA GAAAGCCACCACATCGTTCTCAGATGACCCAAGCAGAGGACTTTCATGTTCCCCCTCAGAGGGT GGAGCTTATGTCTCTGCTGAACTCTTTCGTGTTTTGGCATACTCTGAGAAGCTAAAGAATCCTG GGGAATACCTTTTGTCAAAAGCTAAGGAATTCTCGTGGTCTATTTTGGCTCTCATAGCATCATG CTTTCCGGATGTTTCTCCTTTATCATGCCTAACAATTTGGTTGGAAATTACCGCAGCCAGGGAA ACGTCGTCTATCAAGGTGAACGATATAACGACTAAAATAGCTGAAAATATAGGAGCAGCTGTTG TATCTACAAATTCCTTGCCGACGGATGCTAGAGGTGTCCAGTTTCATTACAATAGGAGGAATCC CAAACGGAGACGACTTACTGCACATACATCTGTGGATTTATTGGCTTCAGCCAATAGTTTAAAC ATCTCTGCTGGTAAAACATTTTGTTCTCATAGAACAGAAGCTGCAGAAGATGAAAAAGCGGAAG ATAGCAGTGTTATTGATGATTCGTCTGATGAGCATGCGTCTCTATCAAAAATGGTCGCAGTGCT TTGTGAACAACGCTTGTTTCTTCCTCTGCTAAAAGCTTTTGACTTGTTCCTCCCGTCCTGCTCT CTACTGCCATTTTTCCGTGCTCTTCAGGCATTTTCTCAAATGCGCCTGTCTGAAGCTTCAGCAC ATCTGGGTTCTTTTTGGGGTAGAGTTAAAGAGGAATCAATGCATTTTCAGTCAAATACAGCCAA AGATGTCAATTTTGGGGCATCTTGGATCAGCAGAACAGCTGTTAAGGCTGCTGATGCTGTTTTG TCAGCTTGTCCATCTCCATATGAGAAAAGATGCTTACTACAACTTCTTGCTGCAACTGATTTTG GTGATGGGGGATCTGCGGCAACATATTATCGGCGTCTTTATTGGAAAGTTAACTTGGCTGAGCC ATCACTCCGGGAGAATGATCTTGACTTAGGAAATGAGTCCCTTGATGATGGCTCTCTTCTGACA GCTTTAGAAAAGAACAGGCAATGGGAGCAAGCAAGAAACTGGGCCAAGCAACTTGAAACCATTG GTGCCACTTGGACATCCTCTGTACATCATGTTACTGAAACACAG
Genomic sequence	GGAACCGAGCTTGGACTTGAGCACTTCCTGCATCGTGGACGGCCACTCGCAGCTTTTAATGCTT TTCTGGAACATAGAGTTGAAAAGTTAAAACTGGAAGATCAATCTGGCTCTTCGATACATGGACA AAGAAATATGCAGTCAGATGTTCCGATGCTACTTGCACCTCTGACGCAGAGTGATGAGTCACTT CTTTCATCTGTACGTGCCGGTCACCTTACCATTACTAGCTTAAATTTCATTCGACATATCTGCA TCGCTTTTATGCTGTCTATTTATGTCTGCATGACTGTTGCTTTACCTTCAGGTCATACCACTTG CTATCACACACTTTGGGGATTCTGTGTTGGTGGCTTCGTGTGCCTTCCTTCTTGAGCTTTGTGG TTTATCTGCTAGCATGCTTCGGATAGACGTTGCATCCTTGAGAAGAATATCATCCTTCTATAAA TCAAATGGTAATGCGGATATGGCACATCAGAAATCGCTGAAGCGCTCAATGTTTCATAGTGTAT CTAGTGAAGATGATCTAATGGGGTCACTAGCTAGGGCCCTTGCTAACGAATACGCTTATCCTGA TATTTCAAGTGTCCCTAAGCAAAAACAGAATCCAAGTATTTCTGGTAGTCAACCCGGTCTTCCG CTAATGCTTGTTCTTCATCATTTGGAACAAGCTAGTCTTCCAGAGATTGGAGTAGGTAGAAAAA CAAGTGGATACTGGCTGTTAACAGGTGATGGTGATGGGTCTGAACTGCGGTCTCAACAGACATC TGCTAGCTTGCATTGGAGTTTAGTTACTCTTTTTTGTCAGATGCATAAGATTCCTCTGAGCACC AAATATCTTGCCATGCTAGCAAGAGACAATGATTGGGTATGCTTCATGATAATTCTTCTTACCT TTTCGTTTCTTACCCTTGAGCTATTACTTGTCCTAATATACGTAAATATCAGGTTGGATTTTTA TCTGAGGCGCAGCTTGGAGGATACCCATTTGATACAGTGCTCAATGTGGTACGTCTCTCACTCC TTACTGGTTTCAGAAATCACAAACAGCAACTTAATGTGCTATGTTACAATTATATGACACATTT TCATCTATCAGGCATCGAAGGAGTTTGGTGATCAACGTTTAAAAGCTCACATACTGACTGTTTT GAGATATGCCAACTCAAAAAAGAAAGCCACCACATCGTTCTCAGATGACCCAAGCAGAGGACTT TCATGTTCCCCCTCAGAGGGTGGAGCTTATGTCTCTGCTGAACTCTTTCGTGTTTTGGCATACT CTGAGAAGCTAAAGAATCCTGGGGAATACCTTTTGTCAAAAGCTAAGGAATTCTCGTGGTCTAT TTTGGCTCTCATAGCATCATGCTTTCCGGATGTTTCTCCTTTATCATGCCTAACAATTTGGTTG GAAATTACCGCAGCCAGGTGTGACAAAATTTAATGAAATTCAATTGGGTTGGGTGTAATAGTAG TAATTTACTATCTTAATGCAAGTCTATATAACATTGGGCGTTTTAAACTCTTTTTCTTGCATGT TTTCTGGAATAAAAAGATGCATAACTTTTTTCTTAGCTCTAACAAAGATCATGCTTTTCAGGGA AACGTCGTCTATCAAGGTGAACGATATAACGACTAAAATAGCTGAAAATATAGGAGCAGCTGTT GTATCTACAAATTCCTTGCCGACGGATGCTAGAGGTGTCCAGTTTCATTACAATAGGAGGAATC CCAAACGGAGACGACTTACTGCACATACATCTGTGGATTTATTGGCTTCAGCCAATAGTTTAAA CATCTCTGCTGGTAAAACATTTTGTTCTCATAGAACAGAAGCTGCAGAAGATGAAAAAGCGGAA GATAGCAGTGTTATTGATGATTCGTCTGATGAGCATGCGTCTCTATCAAAAATGGTCGCAGTGC TTTGTGAACAACGCTTGTTTCTTCCTCTGCTAAAAGCTTTTGACTTGTTCCTCCCGTCCTGCTC TCTACTGCCATTTTTCCGTGCTCTTCAGGTTTGTCTTACATTTTAACCCACTATTTGCCTTCTC TGTTTTCTGTTCCCGGCCTTGATTGTCTGTTTAAAATAACTTTTACACGATACATGTTCATGGG TCTGATGCTGTTTGATAATTTTTTCACCATGAACATCTGTTTTCTTTTTCATATGTTTTGCTGT GGGAGAAAAACTGATGATGCAATTCTGCAAAAGTTCTAGACTAAGAATTTGTAAAATGCTCTGG GTTTTTGTCAAATGCTTAGTTTCTTCTGCCTCATTTTACTTTTCGTGGGGTGAATGCAGATATC TTCATAGGGTTTTGAGCTGTCTTAATTCTTTTCTGCAGGCATTTTCTCAAATGCGCCTGTCTGA AGCTTCAGCACATCTGGGTTCTTTTTGGGGTAGAGTTAAAGAGGAATCAATGCATTTTCAGTCA AATACAGCCAAAGATGTCAATTTTGGGGCATCTTGGATCAGCAGAACAGCTGTTAAGGCTGCTG ATGCTGTTTTGTCAGCTTGTCCATCTCCATATGAGAAAAGATGCTTACTACAACTTCTTGCTGC AACTGATTTTGGTGATGGGGGATCTGCGGCAACATATTATCGGCGTCTTTATTGGAAAGTTAAC TTGGCTGAGCCATCACTCCGGGAGAATGATCTTGACTTAGGAAATGAGTCCCTTGATGATGGCT CTCTTCTGACAGCTTTAGAAAAGAACAGGCAATGGGAGCAAGCAAGAAACTGGGCCAAGCAACT TGAAACCATTGGTGCCACTTGGACATCCTCTGTACATCATGTTACTGAAACACAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.212068601

Conservation Information
Conserved circRNAs	NA
PMCS	0.212068601

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							18348352-18351020(+)
						
					

						Potential amino acid sequence
						
							MQSDVPMLLAPLTQSDESLLSSVIPLAITHFGDSVLVASCAFLLELCGLSASMLRIDVASLRRI
SSFYKSNGNADMAHQKSLKRSMFHSVSSEDDLMGSLARALANEYAYPDISSVPKQKQNPSISGS
QPGLPLMLVLHHLEQASLPEIGVGRKTSGYWLLTGDGDGSELRSQQTSASLHWSLVTLFCQMHK
IPLSTKYLAMLARDNDWVGFLSEAQLGGYPFDTVLNVASKEFGDQRLKAHILTVLRYANSKKKA
TTSFSDDPSRGLSCSPSEGGAYVSAELFRVLAYSEKLKNPGEYLLSKAKEFSWSILALIASCFP
DVSPLSCLTIWLEITAARETSSIKVNDITTKIAENIGAAVVSTNSLPTDARGVQFHYNRRNPKR
RRLTAHTSVDLLASANSLNISAGKTFCSHRTEAAEDEKAEDSSVIDDSSDEHASLSKMVAVLCE
QRLFLPLLKAFDLFLPSCSLLPFFRALQAFSQMRLSEASAHLGSFWGRVKEESMHFQSNTAKDV
NFGASWISRTAVKAADAVLSACPSPYEKRCLLQLLAATDFGDGGSAATYYRRLYWKVNLAEPSL
RENDLDLGNESLDDGSLLTALEKNRQWEQARNWAKQLETIGATWTSSVHHVTETQGTELGLEHF
LHRGRPLAAFNAFLEHRVEKLKLEDQSGSSIHGQRNMQSDVPMLLAPLTQSDESLLSSVIPLAI
THFGDSVLVASCAFLLELCGLSASMLRIDVASLRRISSFYKSNGNADMAHQKSLKRSMFHSVSS
EDDLMGSLARALANEYAYPDISSVPKQKQNPSISGSQPGLPLMLVLHHLEQASLPEIGVGRKTS
GYWLLTGDGDGSELRSQQTSASLHWSLVTLFCQMHKIPLSTKYLAMLARDNDWVGFLSEAQLGG
YPFDTVLNVASKEFGDQRLKAHILTVLRYANSKKKATTSFSDDPSRGLSCSPSEGGAYVSAELF
RVLAYSEKLKNPGEYLLSKAKEFSWSILALIASCFPDVSPLSCLTIWLEITAARETSSIKVNDI
TTKIAENIGAAVVSTNSLPTDARGVQFHYNRRNPKRRRLTAHTSVDLLASANSLNISAGKTFCS
HRTEAAEDEKAEDSSVIDDSSDEHASLSKMVAVLCEQRLFLPLLKAFDLFLPSCSLLPFFRALQ
AFSQMRLSEASAHLGSFWGRVKEESMHFQSNTAKDVNFGASWISRTAVKAADAVLSACPSPYEK
RCLLQLLAATDFGDGGSAATYYRRLYWKVNLAEPSLRENDLDLGNESLDDGSLLTALEKNRQWE
QARNWAKQLETIGATWTSSVHHVTETQGTELGLEHFLHRGRPLAAFNAFLEHRVEKLKLEDQSG
SSIHGQRNMQSDVPMLLAPLTQSDESLLSSVIPLAITHFGDSVLVASCAFLLELCGLSASMLRI
DVASLRRISSFYKSNGNADMAHQKSLKRSMFHSVSSEDDLMGSLARALANEYAYPDISSVPKQK
QNPSISGSQPGLPLMLVLHHLEQASLPEIGVGRKTSGYWLLTGDGDGSELRSQQTSASLHWSLV
TLFCQMHKIPLSTKYLAMLARDNDWVGFLSEAQLGGYPFDTVLNVASKEFGDQRLKAHILTVLR
YANSKKKATTSFSDDPSRGLSCSPSEGGAYVSAELFRVLAYSEKLKNPGEYLLSKAKEFSWSIL
ALIASCFPDVSPLSCLTIWLEITAARETSSIKVNDITTKIAENIGAAVVSTNSLPTDARGVQFH
YNRRNPKRRRLTAHTSVDLLASANSLNISAGKTFCSHRTEAAEDEKAEDSSVIDDSSDEHASLS
KMVAVLCEQRLFLPLLKAFDLFLPSCSLLPFFRALQAFSQMRLSEASAHLGSFWGRVKEESMHF
QSNTAKDVNFGASWISRTAVKAADAVLSACPSPYEKRCLLQLLAATDFGDGGSAATYYRRLYWK
VNLAEPSLRENDLDLGNESLDDGSLLTALEKNRQWEQARNWAKQLETIGATWTSSVHHVTETQG
TELGLEHFLHRGRPLAAFNAFLEHRVEKLKLEDQSGSSIHGQRNMQSDVPMLLAPLTQSDESLL
SSVIPLAITHFGDSVLVASCAFLLELCGLSASMLRIDVASLRRISSFYKSNGNADMAHQKSLKR
SMFHSVSSEDDLMGSLARALANEYAYPDISSVPKQKQNPSISGSQPGLPLMLVLHHLEQASLPE
IGVGRKTSGYWLLTGDGDGSELRSQQTSASLHWSLVTLFCQMHKIPLSTKYLAMLARDNDWVGF
LSEAQLGGYPFDTVLNVASKEFGDQRLKAHILTVLRYANSKKKATTSFSDDPSRGLSCSPSEGG
AYVSAELFRVLAYSEKLKNPGEYLLSKAKEFSWSILALIASCFPDVSPLSCLTIWLEITAARET
SSIKVNDITTKIAENIGAAVVSTNSLPTDARGVQFHYNRRNPKRRRLTAHTSVDLLASANSLNI
SAGKTFCSHRTEAAEDEKAEDSSVIDDSSDEHASLSKMVAVLCEQRLFLPLLKAFDLFLPSCSL
LPFFRALQAFSQMRLSEASAHLGSFWGRVKEESMHFQSNTAKDVNFGASWISRTAVKAADAVLS
ACPSPYEKRCLLQLLAATDFGDGGSAATYYRRLYWKVNLAEPSLRENDLDLGNESLDDGSLLTA
LEKNRQWEQARNWAKQLETIGATWTSSVHHVTETQ(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	18348352-18351020(+)
Potential amino acid sequence	MQSDVPMLLAPLTQSDESLLSSVIPLAITHFGDSVLVASCAFLLELCGLSASMLRIDVASLRRI SSFYKSNGNADMAHQKSLKRSMFHSVSSEDDLMGSLARALANEYAYPDISSVPKQKQNPSISGS QPGLPLMLVLHHLEQASLPEIGVGRKTSGYWLLTGDGDGSELRSQQTSASLHWSLVTLFCQMHK IPLSTKYLAMLARDNDWVGFLSEAQLGGYPFDTVLNVASKEFGDQRLKAHILTVLRYANSKKKA TTSFSDDPSRGLSCSPSEGGAYVSAELFRVLAYSEKLKNPGEYLLSKAKEFSWSILALIASCFP DVSPLSCLTIWLEITAARETSSIKVNDITTKIAENIGAAVVSTNSLPTDARGVQFHYNRRNPKR RRLTAHTSVDLLASANSLNISAGKTFCSHRTEAAEDEKAEDSSVIDDSSDEHASLSKMVAVLCE QRLFLPLLKAFDLFLPSCSLLPFFRALQAFSQMRLSEASAHLGSFWGRVKEESMHFQSNTAKDV NFGASWISRTAVKAADAVLSACPSPYEKRCLLQLLAATDFGDGGSAATYYRRLYWKVNLAEPSL RENDLDLGNESLDDGSLLTALEKNRQWEQARNWAKQLETIGATWTSSVHHVTETQGTELGLEHF LHRGRPLAAFNAFLEHRVEKLKLEDQSGSSIHGQRNMQSDVPMLLAPLTQSDESLLSSVIPLAI THFGDSVLVASCAFLLELCGLSASMLRIDVASLRRISSFYKSNGNADMAHQKSLKRSMFHSVSS EDDLMGSLARALANEYAYPDISSVPKQKQNPSISGSQPGLPLMLVLHHLEQASLPEIGVGRKTS GYWLLTGDGDGSELRSQQTSASLHWSLVTLFCQMHKIPLSTKYLAMLARDNDWVGFLSEAQLGG YPFDTVLNVASKEFGDQRLKAHILTVLRYANSKKKATTSFSDDPSRGLSCSPSEGGAYVSAELF RVLAYSEKLKNPGEYLLSKAKEFSWSILALIASCFPDVSPLSCLTIWLEITAARETSSIKVNDI TTKIAENIGAAVVSTNSLPTDARGVQFHYNRRNPKRRRLTAHTSVDLLASANSLNISAGKTFCS HRTEAAEDEKAEDSSVIDDSSDEHASLSKMVAVLCEQRLFLPLLKAFDLFLPSCSLLPFFRALQ AFSQMRLSEASAHLGSFWGRVKEESMHFQSNTAKDVNFGASWISRTAVKAADAVLSACPSPYEK RCLLQLLAATDFGDGGSAATYYRRLYWKVNLAEPSLRENDLDLGNESLDDGSLLTALEKNRQWE QARNWAKQLETIGATWTSSVHHVTETQGTELGLEHFLHRGRPLAAFNAFLEHRVEKLKLEDQSG SSIHGQRNMQSDVPMLLAPLTQSDESLLSSVIPLAITHFGDSVLVASCAFLLELCGLSASMLRI DVASLRRISSFYKSNGNADMAHQKSLKRSMFHSVSSEDDLMGSLARALANEYAYPDISSVPKQK QNPSISGSQPGLPLMLVLHHLEQASLPEIGVGRKTSGYWLLTGDGDGSELRSQQTSASLHWSLV TLFCQMHKIPLSTKYLAMLARDNDWVGFLSEAQLGGYPFDTVLNVASKEFGDQRLKAHILTVLR YANSKKKATTSFSDDPSRGLSCSPSEGGAYVSAELFRVLAYSEKLKNPGEYLLSKAKEFSWSIL ALIASCFPDVSPLSCLTIWLEITAARETSSIKVNDITTKIAENIGAAVVSTNSLPTDARGVQFH YNRRNPKRRRLTAHTSVDLLASANSLNISAGKTFCSHRTEAAEDEKAEDSSVIDDSSDEHASLS KMVAVLCEQRLFLPLLKAFDLFLPSCSLLPFFRALQAFSQMRLSEASAHLGSFWGRVKEESMHF QSNTAKDVNFGASWISRTAVKAADAVLSACPSPYEKRCLLQLLAATDFGDGGSAATYYRRLYWK VNLAEPSLRENDLDLGNESLDDGSLLTALEKNRQWEQARNWAKQLETIGATWTSSVHHVTETQG TELGLEHFLHRGRPLAAFNAFLEHRVEKLKLEDQSGSSIHGQRNMQSDVPMLLAPLTQSDESLL SSVIPLAITHFGDSVLVASCAFLLELCGLSASMLRIDVASLRRISSFYKSNGNADMAHQKSLKR SMFHSVSSEDDLMGSLARALANEYAYPDISSVPKQKQNPSISGSQPGLPLMLVLHHLEQASLPE IGVGRKTSGYWLLTGDGDGSELRSQQTSASLHWSLVTLFCQMHKIPLSTKYLAMLARDNDWVGF LSEAQLGGYPFDTVLNVASKEFGDQRLKAHILTVLRYANSKKKATTSFSDDPSRGLSCSPSEGG AYVSAELFRVLAYSEKLKNPGEYLLSKAKEFSWSILALIASCFPDVSPLSCLTIWLEITAARET SSIKVNDITTKIAENIGAAVVSTNSLPTDARGVQFHYNRRNPKRRRLTAHTSVDLLASANSLNI SAGKTFCSHRTEAAEDEKAEDSSVIDDSSDEHASLSKMVAVLCEQRLFLPLLKAFDLFLPSCSL LPFFRALQAFSQMRLSEASAHLGSFWGRVKEESMHFQSNTAKDVNFGASWISRTAVKAADAVLS ACPSPYEKRCLLQLLAATDFGDGGSAATYYRRLYWKVNLAEPSLRENDLDLGNESLDDGSLLTA LEKNRQWEQARNWAKQLETIGATWTSSVHHVTETQ(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015

circRNA

Detail information of AT4G39420_circ_g.8

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