Plant Circular RNA Database

Detail information of Os01g0775300_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os01g0775300_circ_g.2
					
						ID in PlantcircBase
						osa_circ_004158
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr1: 32779276-32782850  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os01g0775300						
					
						Parent gene annotation
						
							MATH domain containing protein. (Os01t0775300-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os01g0775300_circ_g.1 Os01g0775350_circ_g.1 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os01t0775300-01:7

General Information
CircRNA Name	Os01g0775300_circ_g.2
ID in PlantcircBase	osa_circ_004158
Alias	NA
Organism	Oryza sativa
Position	chr1: 32779276-32782850 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os01g0775300
Parent gene annotation	MATH domain containing protein. (Os01t0775300-01)
Parent gene strand	-
Alternative splicing	Os01g0775300_circ_g.1 Os01g0775350_circ_g.1
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os01t0775300-01:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AATCCACTTGCCCCTAACCCATTAGTTCTAATAAAATCTTCAACTGTCATATCATGCTCCATCA
AATAATCGTAGAACCGTACAGAGCCTGACTTCGGATcttagtgcggctctgggaacatttgtca
tcctttggagacacaggctgacaaggcaagggttctaaagctgccctctcaagcaaagctatga
catcacca

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1169
Transcript exons: 32779276-32779645,32779773-32779931,32780461-32780590,32
780663-32780731,32780808-32780896,32781061-32781181,3278
2620-32782850
CTTAGTGCGGCTCTGGGAACATTTGTCATCCTTTGGAGACACAGGCTGACAAGGCAAGGGTTCT
AAAGCTGCCCTCTCAAGCAAAGCTATGACATCACCAGCCAAAACAAACATGTCCACATCAACAT
GGACCATAGGCACTGGCAGCTCTACAAAATCCACTGAGTCTATTATGCCTTTCTTGCTCTTGCT
CTTGCTCTGGCACTCGAGCGCCTTCAACCCCGTATACAGAGAGTCCATAACTAACGTTGAAGTT
ACTTCTTTCTCCACAAAGAAATGTTTCACTATTATTTTCAGTATGACATCACTCTTCTCTGTCG
ACATGCGATGCCTTGTGCTTTGGTCAATTGCAAGCCAGAAGGCACGGAAACTGGACCATCTCAT
TTTGTCCTCAATGAGCTTGCAAAGTTTACTTCTGCGCTCTTCAACAAAGCGTCGGTAAATTTGC
TCTATATTGGTCATATAGACACGGAGTAATTCTCGTCGATAAGGGCGATCGAGGCAACGAAATG
GGCGATCCACTTTCTCCCTGATAACTTGAACTTGAGCAATGATTTCAAGAACATCATCAACAAG
GAAACCATCTTGGATTTTTGACAACTCCATAAATTTTTTCCATCCCCAGTCATGTTCTTTCTTC
CAGAATTTGTGCAGGGTGTCTGAATATTTAACTTTCTTTGGATCAAGATTACCCACAGCTATAG
TAAACTGTGCGAAATGGCTCCATCCTGGGAGAAGTTTGTCATGATTAGCAACACATAGAAATAA
TGACAAGTGATTGGAGACATCACATCCTTGAGGGTAAACTAGAATGTACCATTTGTAACCACCA
GCTTCAAATGGTTCGCTTTTCATTTCTCTTTTTTTCTCCTTTGAAAAGTTTTCAATTCTCCAAG
TATATCGCCCAAATAAATCTGAAGGTCTAGGCCCTGAGGTAACAGGATCGTCATCTTCACCATC
AGAGTCCCAAAAGGGAGGGGCCGTGGAAGGGCTCCCATTCTCGACATGCTCGCAGGACCGACAA
TCAGACACAGAAGAAGTGGATACACCTTGATTATTGGTCTCTATCAATCCACTTGCCCCTAACC
CATTAGTTCTAATAAAATCTTCAACTGTCATATCATGCTCCATCAAATAATCGTAGAACCGTAC
AGAGCCTGACTTCGGAT
						
					

						Genomic sequence
						
							CTTAGTGCGGCTCTGGGAACATTTGTCATCCTTTGGAGACACAGGCTGACAAGGCAAGGGTTCT
AAAGCTGCCCTCTCAAGCAAAGCTATGACATCACCAGCCAAAACAAACATGTCCACATCAACAT
GGACCATAGGCACTGGCAGCTCTACAAAATCCACTGAGTCTATTATGCCTTTCTTGCTCTTGCT
CTTGCTCTGGCACTCGAGCGCCTTCAACCCCGTATACAGAGAGTCCATAACTAACGTTGAAGTT
ACTTCTTTCTCCACAAAGAAATGTTTCACTATTATTTTCAGTATGACATCACTCTTCTCTGTCG
ACATGCGATGCCTTGTGCTTTGGTCAATTGCAAGCCAGAAGGCACGGAAACTGCAGTACAAACA
AAGATATGCATGTGTTAGTATTAACTTTTTTAAAAACACACACACGCGAGCGCGCACAGATACT
TAATCATTATGAAAGGATAACAGGATGTTGATAACTTTAATTGTATAACCTGGACCATCTCATT
TTGTCCTCAATGAGCTTGCAAAGTTTACTTCTGCGCTCTTCAACAAAGCGTCGGTAAATTTGCT
CTATATTGGTCATATAGACACGGAGTAATTCTCGTCGATAAGGGCGATCGAGGCAACGAAATGG
GCGATCCACTTTCTCCCTCCAGTATTGAAAAGCAGAAGAGAACAGTTACTGAATGTCCAGCAAT
CAATTTATAAGTATATAACCAAATTTCTGAGCACACCATAGTTGAGCATTGACAAATTAAACAT
AGAAGCTAGGACTTAAATAATTAGAGAAAATAGAGGCATTAACAAAGAGAGATCTTTGAATAAA
TCGCAGTATAACATGTTGCAACATGCAATAAAAACAAAAGAAAGGTTTATACAGCTCACAACAG
GGTACAGTTAAGATTTCAATAAGTCGAAACTGCACATGAAGAGTAAAACTTGAATTATGGAGAG
CATAAATGCCCCCAACAAAATCATCTTAGCACAAAAGCATCGTAGGAACAATTAAATGAAGTGA
TCTTTCGTGTTTCAGGGACATAGGAAAAACATATCTAAAAGCATATCTGTGGAATGCTTTACAT
ATAAGGCCATAGATATGCAATTTATTTCAATCATATAGAACTGCAAACAAATTTTACTCTTTTA
GGTGCTAATCCTGAAAATTGGTAAACTGCCTACCTGATAACTTGAACTTGAGCAATGATTTCAA
GAACATCATCAACAAGGAAACCATCTTGGATTTTTGACAACTCCATAAATTTTTTCCATCCCCA
GTCATGTTCTTTCTTCCAGAATTTGTGCAGGGTGTCTGCAAACTTACTTAGTTAAACTCTGAAA
CAGAGTGTTTAATTCAAACAATAAGAATCACAGATTGCCTCACCTGAATATTTAACTTTCTTTG
GATCAAGATTACCCACAGCTATAGTAAACTGTGCGAAATGGCTCCATCCTGAAATGTGTTAAGG
GTGTGATTAAATACTGTGAGGAACACATAAGATAGTTTAGCCAACATAATAACAGCAAACCTGG
GAGAAGTTTGTCATGATTAGCAACACATAGAAATAATGACAAGTGATTGGAGACATCACATCCT
TGAGGGTAAACTAGAATGTACCTGCACAAATAACAATTAGTGATGAGTGATTTGTCAGTCAATG
GAATAGAGAATCTAAGCAGAATGCATTACAAACTGAGCTACTAAGCAATTTAGAGTTTCCAGCT
CCGAAAAGAGAATTGCTGTGACCAAATTTTCTAGTAAGTTACCATCAGGAATCCTACCATTTGT
AACCACCAGCTTCAAATGGTTCGCTTTTCATTTCTCTTTTTTTCTCCTTTGAAAAGTTTTCAAT
TCTCCAAGTATATCGCCCAAATAAATCTGAAGGTCTAGGCCCTGAGGTAACTGACAGAGATTAG
CCAAATGAAATGTAGCTGCAATTATTCAATTACAATAAAGAAAGAAACATCGCTAAAGAAAAAA
AAAACAGGTTAATTTGAAGATGGAACTATAATTACTATTGTGTCAAGAACTGTAACTGACAAGA
AGTTCGCAGGTTTATCACTTCTGTCAAACAAAAATGTTGGTAAATACTAGTAACATATATTAGT
AGCCATAGACAGCAGCATGTGTACTCCAAAACTCTTTTTATGCCCTAAACTCAGTTCAACTTTA
CAAAGACCAAGAATAGAATGGATAACAGCATTCTTCGTGGATAAATAATTCATATGTACAACGG
CAAATAATACTTTTGGAGATAAGTTTTTAGGAAGCTTCGTTAACTTAATGACATGGTGATATAT
TGACATGGATAGGAATGCACGGCATATGATGATGACATAAAAATATGTCAACTGTAACATAATG
TATTTGGGATGCAAGCAAGAAACACATGTTTTCAGGCAACTGTTTCTGGATACAAGCAGAAATA
TGGTGATTAGCGAATAACCAAAAAGTGAATTAGCTAAAAAGACACAATTAACCCTTCTAGGCTT
CTGAACTGTCAACCCAGCTAAACAGATACTAATCAAGCTAAACAGTATCTTAGGTTAACTACGT
CTGCTGCCAAACACAAGAAATGAGTTAAGTTAACCTAGTTATTTAACCCAGAGTGAAACATAGG
GCTTAAAGGTAGAGATAAGTACAGGTGGCCAAAAGTGCAATATTCAGAAGGGCAACTGCATTGC
ACTGGCACGTTGAATGTGTTATGTGTACAAGAGGAAGAAACAATAGGAGTAAACAAACTAATGA
TACTTTTGAGTATGACTAGAAAAAATAGTTCTTTCAGGTCTTCATAGCAAATTTAAGCATGTAA
TCTCTGTCCATACTAAGGCCCTGTTTCTTTCAGCTTAAGATTATTATAATCTAGATTATTGAGT
CAGATTAATATAAGCTAGATTGTTATAATCTGTAGTAGAATGGAGCCTAGATTATTGGGTTTGC
AAGTCTAAAGAGGGAGTGGGGTGGCATGGTGGGTAATTTTTCACCCAATAATCTGGAAAAAGCT
CACCTAAATGAGCTTAACAGATTATAATAAGCTACTTCAATAAGTTGTTTGTTTCTTTCTGCTT
ACTCCCAATAATCTGGATTATAATAATCCCAAGCTGAAAGAAACAGGGCCTAATGCGCGTCCCT
CAAGATTACAGTTTCCAGCACTGGCCTGCCAGACACATATTTCAACATAATATTATCTTCCTAA
GGAACTAATCATAACTCTTAGTTGAGAAATGGCTGTTTGTTTTTCCCATAAATAGGCTATAAAA
ATTTCAAACTCTAGCGCTATCATTTTGAATTATTACGGTAATTATCATCACAGTGAACAAAAGT
AGTGTTATTTGCATACCAGGATCGTCATCTTCACCATCAGAGTCCCAAAAGGGAGGGGCCGTGG
AAGGGCTCCCATTCTCGACATGCTCGCAGGACCGACAATCAGACACAGAAGAAGTGGATACACC
TTGATTATTGGTCTCTATCAATCCACTTGCCCCTAACCCATTAGTTCTAATAAAATCTTCAACT
GTCATATCATGCTCCATCAAATAATCGTAGAACCGTACAGAGCCTGACTTCGGAT
						
					

			
		

Sequences
Splice junction sequence	AATCCACTTGCCCCTAACCCATTAGTTCTAATAAAATCTTCAACTGTCATATCATGCTCCATCA AATAATCGTAGAACCGTACAGAGCCTGACTTCGGATcttagtgcggctctgggaacatttgtca tcctttggagacacaggctgacaaggcaagggttctaaagctgccctctcaagcaaagctatga catcacca
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1169 Transcript exons: 32779276-32779645,32779773-32779931,32780461-32780590,32 780663-32780731,32780808-32780896,32781061-32781181,3278 2620-32782850 CTTAGTGCGGCTCTGGGAACATTTGTCATCCTTTGGAGACACAGGCTGACAAGGCAAGGGTTCT AAAGCTGCCCTCTCAAGCAAAGCTATGACATCACCAGCCAAAACAAACATGTCCACATCAACAT GGACCATAGGCACTGGCAGCTCTACAAAATCCACTGAGTCTATTATGCCTTTCTTGCTCTTGCT CTTGCTCTGGCACTCGAGCGCCTTCAACCCCGTATACAGAGAGTCCATAACTAACGTTGAAGTT ACTTCTTTCTCCACAAAGAAATGTTTCACTATTATTTTCAGTATGACATCACTCTTCTCTGTCG ACATGCGATGCCTTGTGCTTTGGTCAATTGCAAGCCAGAAGGCACGGAAACTGGACCATCTCAT TTTGTCCTCAATGAGCTTGCAAAGTTTACTTCTGCGCTCTTCAACAAAGCGTCGGTAAATTTGC TCTATATTGGTCATATAGACACGGAGTAATTCTCGTCGATAAGGGCGATCGAGGCAACGAAATG GGCGATCCACTTTCTCCCTGATAACTTGAACTTGAGCAATGATTTCAAGAACATCATCAACAAG GAAACCATCTTGGATTTTTGACAACTCCATAAATTTTTTCCATCCCCAGTCATGTTCTTTCTTC CAGAATTTGTGCAGGGTGTCTGAATATTTAACTTTCTTTGGATCAAGATTACCCACAGCTATAG TAAACTGTGCGAAATGGCTCCATCCTGGGAGAAGTTTGTCATGATTAGCAACACATAGAAATAA TGACAAGTGATTGGAGACATCACATCCTTGAGGGTAAACTAGAATGTACCATTTGTAACCACCA GCTTCAAATGGTTCGCTTTTCATTTCTCTTTTTTTCTCCTTTGAAAAGTTTTCAATTCTCCAAG TATATCGCCCAAATAAATCTGAAGGTCTAGGCCCTGAGGTAACAGGATCGTCATCTTCACCATC AGAGTCCCAAAAGGGAGGGGCCGTGGAAGGGCTCCCATTCTCGACATGCTCGCAGGACCGACAA TCAGACACAGAAGAAGTGGATACACCTTGATTATTGGTCTCTATCAATCCACTTGCCCCTAACC CATTAGTTCTAATAAAATCTTCAACTGTCATATCATGCTCCATCAAATAATCGTAGAACCGTAC AGAGCCTGACTTCGGAT
Genomic sequence	CTTAGTGCGGCTCTGGGAACATTTGTCATCCTTTGGAGACACAGGCTGACAAGGCAAGGGTTCT AAAGCTGCCCTCTCAAGCAAAGCTATGACATCACCAGCCAAAACAAACATGTCCACATCAACAT GGACCATAGGCACTGGCAGCTCTACAAAATCCACTGAGTCTATTATGCCTTTCTTGCTCTTGCT CTTGCTCTGGCACTCGAGCGCCTTCAACCCCGTATACAGAGAGTCCATAACTAACGTTGAAGTT ACTTCTTTCTCCACAAAGAAATGTTTCACTATTATTTTCAGTATGACATCACTCTTCTCTGTCG ACATGCGATGCCTTGTGCTTTGGTCAATTGCAAGCCAGAAGGCACGGAAACTGCAGTACAAACA AAGATATGCATGTGTTAGTATTAACTTTTTTAAAAACACACACACGCGAGCGCGCACAGATACT TAATCATTATGAAAGGATAACAGGATGTTGATAACTTTAATTGTATAACCTGGACCATCTCATT TTGTCCTCAATGAGCTTGCAAAGTTTACTTCTGCGCTCTTCAACAAAGCGTCGGTAAATTTGCT CTATATTGGTCATATAGACACGGAGTAATTCTCGTCGATAAGGGCGATCGAGGCAACGAAATGG GCGATCCACTTTCTCCCTCCAGTATTGAAAAGCAGAAGAGAACAGTTACTGAATGTCCAGCAAT CAATTTATAAGTATATAACCAAATTTCTGAGCACACCATAGTTGAGCATTGACAAATTAAACAT AGAAGCTAGGACTTAAATAATTAGAGAAAATAGAGGCATTAACAAAGAGAGATCTTTGAATAAA TCGCAGTATAACATGTTGCAACATGCAATAAAAACAAAAGAAAGGTTTATACAGCTCACAACAG GGTACAGTTAAGATTTCAATAAGTCGAAACTGCACATGAAGAGTAAAACTTGAATTATGGAGAG CATAAATGCCCCCAACAAAATCATCTTAGCACAAAAGCATCGTAGGAACAATTAAATGAAGTGA TCTTTCGTGTTTCAGGGACATAGGAAAAACATATCTAAAAGCATATCTGTGGAATGCTTTACAT ATAAGGCCATAGATATGCAATTTATTTCAATCATATAGAACTGCAAACAAATTTTACTCTTTTA GGTGCTAATCCTGAAAATTGGTAAACTGCCTACCTGATAACTTGAACTTGAGCAATGATTTCAA GAACATCATCAACAAGGAAACCATCTTGGATTTTTGACAACTCCATAAATTTTTTCCATCCCCA GTCATGTTCTTTCTTCCAGAATTTGTGCAGGGTGTCTGCAAACTTACTTAGTTAAACTCTGAAA CAGAGTGTTTAATTCAAACAATAAGAATCACAGATTGCCTCACCTGAATATTTAACTTTCTTTG GATCAAGATTACCCACAGCTATAGTAAACTGTGCGAAATGGCTCCATCCTGAAATGTGTTAAGG GTGTGATTAAATACTGTGAGGAACACATAAGATAGTTTAGCCAACATAATAACAGCAAACCTGG GAGAAGTTTGTCATGATTAGCAACACATAGAAATAATGACAAGTGATTGGAGACATCACATCCT TGAGGGTAAACTAGAATGTACCTGCACAAATAACAATTAGTGATGAGTGATTTGTCAGTCAATG GAATAGAGAATCTAAGCAGAATGCATTACAAACTGAGCTACTAAGCAATTTAGAGTTTCCAGCT CCGAAAAGAGAATTGCTGTGACCAAATTTTCTAGTAAGTTACCATCAGGAATCCTACCATTTGT AACCACCAGCTTCAAATGGTTCGCTTTTCATTTCTCTTTTTTTCTCCTTTGAAAAGTTTTCAAT TCTCCAAGTATATCGCCCAAATAAATCTGAAGGTCTAGGCCCTGAGGTAACTGACAGAGATTAG CCAAATGAAATGTAGCTGCAATTATTCAATTACAATAAAGAAAGAAACATCGCTAAAGAAAAAA AAAACAGGTTAATTTGAAGATGGAACTATAATTACTATTGTGTCAAGAACTGTAACTGACAAGA AGTTCGCAGGTTTATCACTTCTGTCAAACAAAAATGTTGGTAAATACTAGTAACATATATTAGT AGCCATAGACAGCAGCATGTGTACTCCAAAACTCTTTTTATGCCCTAAACTCAGTTCAACTTTA CAAAGACCAAGAATAGAATGGATAACAGCATTCTTCGTGGATAAATAATTCATATGTACAACGG CAAATAATACTTTTGGAGATAAGTTTTTAGGAAGCTTCGTTAACTTAATGACATGGTGATATAT TGACATGGATAGGAATGCACGGCATATGATGATGACATAAAAATATGTCAACTGTAACATAATG TATTTGGGATGCAAGCAAGAAACACATGTTTTCAGGCAACTGTTTCTGGATACAAGCAGAAATA TGGTGATTAGCGAATAACCAAAAAGTGAATTAGCTAAAAAGACACAATTAACCCTTCTAGGCTT CTGAACTGTCAACCCAGCTAAACAGATACTAATCAAGCTAAACAGTATCTTAGGTTAACTACGT CTGCTGCCAAACACAAGAAATGAGTTAAGTTAACCTAGTTATTTAACCCAGAGTGAAACATAGG GCTTAAAGGTAGAGATAAGTACAGGTGGCCAAAAGTGCAATATTCAGAAGGGCAACTGCATTGC ACTGGCACGTTGAATGTGTTATGTGTACAAGAGGAAGAAACAATAGGAGTAAACAAACTAATGA TACTTTTGAGTATGACTAGAAAAAATAGTTCTTTCAGGTCTTCATAGCAAATTTAAGCATGTAA TCTCTGTCCATACTAAGGCCCTGTTTCTTTCAGCTTAAGATTATTATAATCTAGATTATTGAGT CAGATTAATATAAGCTAGATTGTTATAATCTGTAGTAGAATGGAGCCTAGATTATTGGGTTTGC AAGTCTAAAGAGGGAGTGGGGTGGCATGGTGGGTAATTTTTCACCCAATAATCTGGAAAAAGCT CACCTAAATGAGCTTAACAGATTATAATAAGCTACTTCAATAAGTTGTTTGTTTCTTTCTGCTT ACTCCCAATAATCTGGATTATAATAATCCCAAGCTGAAAGAAACAGGGCCTAATGCGCGTCCCT CAAGATTACAGTTTCCAGCACTGGCCTGCCAGACACATATTTCAACATAATATTATCTTCCTAA GGAACTAATCATAACTCTTAGTTGAGAAATGGCTGTTTGTTTTTCCCATAAATAGGCTATAAAA ATTTCAAACTCTAGCGCTATCATTTTGAATTATTACGGTAATTATCATCACAGTGAACAAAAGT AGTGTTATTTGCATACCAGGATCGTCATCTTCACCATCAGAGTCCCAAAAGGGAGGGGCCGTGG AAGGGCTCCCATTCTCGACATGCTCGCAGGACCGACAATCAGACACAGAAGAAGTGGATACACC TTGATTATTGGTCTCTATCAATCCACTTGCCCCTAACCCATTAGTTCTAATAAAATCTTCAACT GTCATATCATGCTCCATCAAATAATCGTAGAACCGTACAGAGCCTGACTTCGGAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_002446* 						
					
						PMCS
						0.227323795

Conservation Information
Conserved circRNAs	osi_circ_002446*
PMCS	0.227323795

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							32779306-32782804(-)
32782814-32782814(-)
						
						Potential amino acid sequence
						
							MTNVPRAALRSEVRLCTVLRLFDGA*(-)
MEHDMTVEDFIRTNGLGASGLIETNNQGVSTSSVSDCRSCEHVENGSPSTAPPFWDSDGEDDDP
VTSGPRPSDLFGRYTWRIENFSKEKKREMKSEPFEAGGYKWYILVYPQGCDVSNHLSLFLCVAN
HDKLLPGWSHFAQFTIAVGNLDPKKVKYSDTLHKFWKKEHDWGWKKFMELSKIQDGFLVDDVLE
IIAQVQVIREKVDRPFRCLDRPYRRELLRVYMTNIEQIYRRFVEERRSKLCKLIEDKMRWSSFR
AFWLAIDQSTRHRMSTEKSDVILKIIVKHFFVEKEVTSTLVMDSLYTGLKALECQSKSKSKKGI
IDSVDFVELPVPMVHVDVDMFVLAGDVIALLERAALEPLPCQPVSPKDDKCSQSRTKIRSQALY
GSTII*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	32779306-32782804(-) 32782814-32782814(-)
Potential amino acid sequence	MTNVPRAALRSEVRLCTVLRLFDGA(-) MEHDMTVEDFIRTNGLGASGLIETNNQGVSTSSVSDCRSCEHVENGSPSTAPPFWDSDGEDDDP VTSGPRPSDLFGRYTWRIENFSKEKKREMKSEPFEAGGYKWYILVYPQGCDVSNHLSLFLCVAN HDKLLPGWSHFAQFTIAVGNLDPKKVKYSDTLHKFWKKEHDWGWKKFMELSKIQDGFLVDDVLE IIAQVQVIREKVDRPFRCLDRPYRRELLRVYMTNIEQIYRRFVEERRSKLCKLIEDKMRWSSFR AFWLAIDQSTRHRMSTEKSDVILKIIVKHFFVEKEVTSTLVMDSLYTGLKALECQSKSKSKKGI IDSVDFVELPVPMVHVDVDMFVLAGDVIALLERAALEPLPCQPVSPKDDKCSQSRTKIRSQALY GSTII(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os01g0775300_circ_g.2

Address

Any questions?

Supported by