Detailed infomation of each circRNA
General Information | |
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CircRNA Name | POPTR_0007s02460_circ_g.2 |
ID in PlantcircBase | pop_circ_002097 |
Alias | Chr07:14106680|14106907 |
Organism | Populus trichocarpa |
Position | chr7: 1458689-1458916 JBrowse» |
Reference genome | Populus trichocarpa genome v3.0 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | POPTR_0007s02460 |
Parent gene annotation | NA |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | NA |
Tissues | stem cambium |
Exon boundary | No-No |
Splicing signals | GT-AA |
Number of exons covered | POPTR_0007s02460.1:1 |
Conservation Information | |
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Conserved circRNAs |
osa_circ_025454 csa_circ_004238 csa_circ_004237 osa_circ_025428 osi_circ_005766 sly_circ_003776 osa_circ_025429 osi_circ_014902 |
PMCS | 1.127605556 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zheng et al., 2020 |