Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d050112_circ_g.1 |
ID in PlantcircBase | zma_circ_001687 |
Alias | circ2244 |
Organism | Zea mays |
Position | chr4: 66639458-66641088 JBrowse» |
Reference genome | AGPv4.38 |
Type | ui-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d050112 |
Parent gene annotation |
Putative DUF1296 domain containing family protein |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 2 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | Zm00001d050112_T011:3 Zm00001d050112_T026:3 Zm00001d050112_T004:3 Zm00001d050112_T021:3 Zm00001d050112_T025:3 Zm00001d050112_T010:3 Zm00001d050112_T035:3 Zm00001d050112_T018:3 Zm00001d050112_T007:3 Zm00001d050112_T037:2 Zm00001d050112_T020:3 Zm00001d050112_T031:3 Zm00001d050112_T028:3 Zm00001d050112_T022:3 Zm00001d050112_T006:3 Zm00001d050112_T029:3 Zm00001d050112_T008:3 Zm00001d050112_T033:3 Zm00001d050112_T003:3 Zm00001d050112_T014:3 Zm00001d050112_T027:3 Zm00001d050112_T017:3 Zm00001d050112_T019:3 Zm00001d050112_T001:3 Zm00001d050112_T009:3 Zm00001d050112_T002:3 Zm00001d050112_T032:3 Zm00001d050112_T030:3 Zm00001d050112_T024:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.026387758 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |