Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G23950_circ_g.1 |
ID in PlantcircBase | ath_circ_004112 |
Alias | At_ciR1200 |
Organism | Arabidpsis thaliana |
Position | chr1: 8470411-8470536 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | AT1G23950 |
Parent gene annotation |
UPF0725 protein At1g23950 |
Parent gene strand | - |
Alternative splicing | 1_circ_ag.3 1_circ_ag.4 1_circ_ag.2 |
Support reads | 4 |
Tissues | leaf |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | AT1G23950.3:1 AT1G23950.4:1 AT1G23950.2:1 AT1G23950.5:1 AT1G23950.1:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.198633164 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |