Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d035512_circ_g.4 |
ID in PlantcircBase | zma_circ_002211 |
Alias | circ1939 |
Organism | Zea mays |
Position | chr6: 30483835-30484445 JBrowse» |
Reference genome | AGPv4.38 |
Type | ue-circRNA |
Identification method | CIRCexplor2 |
Parent gene | Zm00001d035512 |
Parent gene annotation |
Putative AP2/EREBP transcription factor superfamily protein |
Parent gene strand | + |
Alternative splicing | Zm00001d035512_circ_g.2 Zm00001d035512_circ_g.3 Zm00001d035512_circ_g.5 Zm00001d035512_circ_g.6 |
Support reads | 14 |
Tissues | seedling leaves |
Exon boundary | No-Yes |
Splicing signals | GC-CA |
Number of exons covered | Zm00001d035512_T004:2 Zm00001d035512_T001:2 Zm00001d035512_T002:2 Zm00001d035512_T003:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.175309479 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017b |