| CircRNA Name |
AT1G27760_circ_g.11 |
| ID in PlantcircBase |
ath_circ_004581 |
| Alias |
At_ciR326, AT1G27760_C1 |
| Organism |
Arabidpsis thaliana |
| Position |
chr1: 9670307-9670619 JBrowse» |
| Reference genome |
TAIR10.38 |
| Type |
e-circRNA
|
| Identification method |
CIRCexplorer, KNIFE, PcircRNA_finder, circRNA_finder, circseq_cup, find_circ, CIRI-full, CIRI2 |
| Parent gene |
AT1G27760 |
| Parent gene annotation |
SAT32
|
| Parent gene strand |
+ |
| Alternative splicing |
AT1G27760_circ_g.2 AT1G27760_circ_g.3 AT1G27760_circ_g.4 AT1G27760_circ_g.5 AT1G27760_circ_g.6 AT1G27760_circ_g.7 AT1G27760_circ_g.8 AT1G27760_circ_g.9 AT1G27760_circ_g.10 AT1G27760_circ_g.12 AT1G27760_circ_g.13 AT1G27760_circ_g.14 |
| Support reads |
18/15/3 |
| Tissues |
leaf/leaf, whole_plant/seedlings |
| Exon boundary |
Yes-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
| Splicing signals |
GT-AG
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
| Number of exons covered |
AT1G27760.1:1
AT1G27760.2:1
AT1G27760.3:1
|
