Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d048165_circ_g.3 |
ID in PlantcircBase | zma_circ_006001 |
Alias | Rctrl_test_circ_000407 |
Organism | Zea mays |
Position | chr9: 151241411-151241522 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d048165 |
Parent gene annotation |
Protein EARLY RESPONSIVE TO DEHYDRATION 15 |
Parent gene strand | + |
Alternative splicing | Zm00001d048165_circ_g.1 Zm00001d048165_circ_g.2 |
Support reads | NA |
Tissues | root |
Exon boundary | No-No |
Splicing signals | CT-GA |
Number of exons covered | Zm00001d048165_T003:1 Zm00001d048165_T004:1 Zm00001d048165_T001:1 Zm00001d048165_T002:1 Zm00001d048165_T006:1 Zm00001d048165_T005:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.333333333 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |