Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT2G04790_circ_g.2 |
ID in PlantcircBase | ath_circ_012811 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr2: 1680034-1680405 JBrowse» |
Reference genome | TAIR10.38 |
Type | u-circRNA |
Identification method | circRNA_finder, find_circ |
Parent gene | AT2G04790 |
Parent gene annotation |
unknown protein |
Parent gene strand | + |
Alternative splicing | AT2G04790_circ_g.1 |
Support reads | 2 |
Tissues | whole_plant |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | AT2G04790.3:2 AT2G04790.8:2 AT2G04790.9:2 AT2G04790.10:2 AT2G04790.1:1 AT2G04790.2:2 AT2G04790.15:2 AT2G04790.7:2 AT2G04790.16:2 AT2G04790.13:1 AT2G04790.11:2 AT2G04790.4:1 AT2G04790.14:1 AT2G04790.6:2 AT2G04790.5:1 AT2G04790.12:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.171861962 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |