Splice junction sequence |
AAAAGCGCATATCATTCTAGCTCGTGACTGTGTGATTCTTTGTCATCCATTCCCAGCACGATTA CGACTTGGCATAGACTTCGCTCTCTTTGGCCCCATTctgaaataacctccaaacaagcagcagt tactgcacagccctccaggtttaggtgagctagcttcgatagacctgtaaagaacaaatacaaa atatgaaa
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 1062 Transcript exons: 25131339-25131410,25131580-25131651,25131744-25131818,25 132094-25132240,25132368-25132575,25133131-25133259,2513 3333-25133691 CTGAAATAACCTCCAAACAAGCAGCAGTTACTGCACAGCCCTCCAGGTTTAGGTGAGCTAGCTT CGATAGACCTCTTAGATAAGAAACACCAAGATCACTTATTTTGCAGCAAGAAAGTTGAAGCTCT CTCAAATTTGTAAGATCTGATAAATGTTTCATATCAGAATCTGTGATGCCATTACAATACCTCA AATTTAGCTTTTCCAGTTTTCTCAAGCCTTTTAAATGAACAAGTCCACCATGAATCTTCGGACA TCGCTCAAGGTCCAAGCTACCCAAATTAACCATGTTTGCAAAGGCTTTAGCTCCTTCAGCAGTA ACAGCAGAACATTTTTTAAAGCTCAGGGATGTCACATTTGAGAGGCCTGACAATGTTTTAAGTC CATGCTCCGATATCTGATCACAGTAATTGCATGACAAACTTTGCAAGTTGATGCAATCCTTGAG TTGATTCAGTCCACCATCAGTCACATCAGAGCAAGAGATATCAACAGATAACAATGATTGCCCT TGAGAAGCCGCTACTTCCATCCAAGCATCCCTCACCCCAGGGTAGTCTGCCAAACAGATGTCCT GCAATGCACAATCACGAAAAGCTCCAAGCAACTCTTCAGTGAGAATGTTCCACTCCACCAGTTC ATTAAATACCTGCTGACTAAGATCTCTAGGCAGCAGCGAGAAATCAGAATACTTCCCAATATCC TCGCGGACTTTGGCCACACAGAGCTCCATTAGCGATGGGCACCGCACAGGCACTGGTCCCTGCA CCTTCCTGTGTACATCAGAGCCGCTGCGGGGCAAGGTGTGCAGTAGCCACTTGAAGCTGCTGCT CTTGGAGAACCTTGCACTGTAGAGATCTTCCTCATCAACAAGCAGCTGGCCTCTCTTCCTAGAG CAAGCACTTCCCATGGCGACGATGCGAGCACCGATCACAAACCAATCACTTCTTCTTGATGGAC TAAAAAGCGCATATCATTCTAGCTCGTGACTGTGTGATTCTTTGTCATCCATTCCCAGCACGAT TACGACTTGGCATAGACTTCGCTCTCTTTGGCCCCATT
Transcript length: 249 Transcript exons: 25131339-25131402,25133507-25133691 CTGAAATAACCTCCAAACAAGCAGCAGTTACTGCACAGCCCTCCAGGTTTAGGTGAGCTAGCTT CTGGCCTCTCTTCCTAGAGCAAGCACTTCCCATGGCGACGATGCGAGCACCGATCACAAACCAA TCACTTCTTCTTGATGGACTAAAAAGCGCATATCATTCTAGCTCGTGACTGTGTGATTCTTTGT CATCCATTCCCAGCACGATTACGACTTGGCATAGACTTCGCTCTCTTTGGCCCCATT
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Genomic sequence |
CTGAAATAACCTCCAAACAAGCAGCAGTTACTGCACAGCCCTCCAGGTTTAGGTGAGCTAGCTT CGATAGACCTGTAAAGAACAAATACAAAATATGAAACAGAGGCTAACTTTAGATGAAACTTCAT GTCATTATATTAATAGAAACAACGAATTAATCAGAATATTACAGATACAAATGGATGTAGCTTT AGGTAGATAAGGTTCCACTGGAAAAGGAAGAAATTTATTTCTGGGATACCTCTTAGATAAGAAA CACCAAGATCACTTATTTTGCAGCAAGAAAGTTGAAGCTCTCTCAAATTTGTAAGATCTACAAG GAAAAGGGTATTTATTAGACGTGCAGATCAGTATGTGTGATAACATACACTGCTTGACACTAGA TGGTCAACATAAAGGTGTTACCTGATAAATGTTTCATATCAGAATCTGTGATGCCATTACAATA CCTCAAATTTAGCTTTTCCAGTTTTCTCAAGCCTGAAAAAGAAAGTTATTATTGGATCTGACAG AAGTATAATTAAAATGTATTCACGATTGAGTAGCGTTTGAACAAATAGGTAGCATGCCAGTCTT CCCTGTATTTATTACAAAGAAAGATATATAAAAGCTCTGGATGATAAATATATCTCTGTTTCAT TGGGGTGTAGGGTGCGGGGAACACATGGTAAATGATAAAATTAGATCATGCATTTATAATAAAT AAGTTGGCTGTGGTTACATTGTGATGATATATTAATGAAATAGCAGGAAACCTTTTAAATGAAC AAGTCCACCATGAATCTTCGGACATCGCTCAAGGTCCAAGCTACCCAAATTAACCATGTTTGCA AAGGCTTTAGCTCCTTCAGCAGTAACAGCAGAACATTTTTTAAAGCTCAGGGATGTCACATTTG AGAGGCCTGCAGAATTAAAAAGCAATACCATAAATGACAGGAACAGAATATCTAGTGATCAGGA ACATTGACACCACTCTTATCATAGAGATGGAAGAAAACTCAACTCTCAGGCTATCAGAAAATCA CTAACCTGACAATGTTTTAAGTCCATGCTCCGATATCTGATCACAGTAATTGCATGACAAACTT TGCAAGTTGATGCAATCCTTGAGTTGATTCAGTCCACCATCAGTCACATCAGAGCAAGAGATAT CAACAGATAACAATGATTGCCCTTGAGAAGCCGCTACTTCCATCCAAGCATCCCTCACCCCAGG GTAGTCTGCCAAACAGATGTCCTGAGACCAAGTAGAAGAATAGCATAGGAGGTCAATATCTAGT CTCAGAGTAACTTATCCCAGAAACAAGAAATACTCCAAATTTGGTCCTTTCTTTATGTGGCACA CAAGTAAAGCGATTGCTTGGCTTGCTTGTAGCAGGAAGATAGAAGCATCATCTGAGTTACACAG AATAAGATAGCAGCTGTGCACGTGAGCTCAACTGGTCTATTAGTATCAGTACCCAGTGGAGGCT TCCTTGAGTGGATTTTCCTCAATTGCTTACAGGATAAATTTTACCAACACATTTTAGTTTACTT TCCTGAGTTAGCTTATAAAAATAAGCTATAAAATCGTTTACAACATAGTAAGAATTGTTCCAAC AAGATGCCTTTATTCGTTCCCTGATACTACATTGAAAGTTAGAAACTGCTACAAGGGAATGTCA GGATTGCATTCCATAGAGTTTGCAATAATTCCATATTGATTTTCCTTGTTTAGAATTGAGTCAT TTTTTTCGCGAACGTGTTTAGAGCTCAGTCATAATTACGTGCCAAACAAGATCAAGCACTTCAC CTGCAATGCACAATCACGAAAAGCTCCAAGCAACTCTTCAGTGAGAATGTTCCACTCCACCAGT TCATTAAATACCTGCTGACTAAGATCTCTAGGCAGCAGCGAGAAATCAGAATACTTCCCAATAT CCTGAAATCACCCCTCATCAAGTCAGGCAACAATACACACAGAAAACTCAATCATCCAAGGCCA CAAGCACTACCTCGCGGACTTTGGCCACACAGAGCTCCATTAGCGATGGGCACCGCACAGGCAC TGGTCCCTGCACCTTCCTGTGTACATCAGAGCCGCTGCGGGGCAAGGTGTGCAGTAGCCACTTG AAGCTGCTGCTCTTGGAGAACCTTGCACTGTAGAGATCTTCCTCATCAACAAGCAGCTGGCCTC TCTTCCTAGAGCAAGCACTTCCCATGGCGACGATGCGAGCACCGATCACAAACCAATCACTTCT TCTTGATGGACTAAAAAGCGCATATCATTCTAGCTCGTGACTGTGTGATTCTTTGTCATCCATT CCCAGCACGATTACGACTTGGCATAGACTTCGCTCTCTTTGGCCCCATT |