Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G16710_circ_g.4 |
ID in PlantcircBase | ath_circ_002942 |
Alias | 1:5720653-5721045 |
Organism | Arabidpsis thaliana |
Position | chr1: 5720653-5721045 JBrowse» |
Reference genome | TAIR10.38 |
Type | u-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT1G16710 |
Parent gene annotation |
Histone acetyltransferase HAC12 |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 2 |
Tissues | seedling |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G16710.6:1 AT1G16710.5:1 AT1G16710.4:1 AT1G16710.2:1 AT1G16710.7:1 AT1G16710.3:1 AT1G16710.9:1 AT1G16710.10:1 AT1G16710.1:1 AT1G16710.8:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.527897458 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |