Splice junction sequence |
AAGAAGTACCAGGCGACACTCCAGTTAGCTCAAAACCTACTGCTTCAGTTACAGCAGCGTGGAT CTGGAAATCAATCCTGAGACCTAATTATTGCTTCAGgctagagctgttagaaatctgtgggttg gtggcattagcccatcgatttcaaaggaggagcttgagggggagtttctgaagttcggaaaagt tgaaggtg
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 2428 Transcript exons: 145412808-145413050,145413144-145413221,145413322-145414 064,145414157-145415520 GCTAGAGCTGTTAGAAATCTGTGGGTTGGTGGCATTAGCCCATCGATTTCAAAGGAGGAGCTTG AGGGGGAGTTTCTGAAGTTCGGAAAAGTTGAAGGTGTTGCATTCTCCCAAGATCAGACTTCAGC ATACATAGATTTTGAGAAGCTTGAAGACGCAATTTCTGCTCACAGATCCTTGAATGGAAAAATG CTAGGTGGCAAGGAATTGTGTGTTGATTTCCAGAGGTCCAAGGGAAGAGCGGAATGGTCAGAAG CTAGCAGCTTCAATGGTAGAGTACCAGGGCCAGTGGGTGATAAGAGAGGCAGTGGCCCTCTGAA GAGTTCTGCTGGAGTGCGGATGCGAGAGGCACAGCCTACCAATGTTCTCTGGGTTGGTTTTCCA GGTTCTTATAGAGTCATTGATGAGGAGGCACTTAAGCATGCCATGTCAGTATTCGGTGTCGTTA CGAAGATAAAAGTTTTCCAGACAAGGCAGTATGCTTTTGTTGAGTTTGCAAATGTTGCGGAAGC TTGTAATGCTAAGATGAATCTAGATGGTCATCTTTTCAATGATCCCAGGATTCAGATTCTTTTC TCAAACAGTGGGCTTGCACCAAACAAATTGGACAACCCAACATCGGTTGCTGGATTTCCTAGTT CAGAAATCTATTCCAGTGATGGTCGTCTAGGCCCTGGTATTGGCAGTGGAACTTTGCAAGGGTA TGATCCACCAAGAGGAGGAAGAACAAGATATTACGATTATGCGGGTATGCCTACTCCAGGTGGT ATCCTTTCACAACCTGAACCATTTGATCCAAGAGAAGCAAAAAGAATGAGGCTTGCTGCTGGTG CTGACCCTTACGATGTAAGGGCAGGCAGCACAGGTCTTTATTCTGCTGGATACCGTCATCAGGG CAGTTCTGTGCACGCTGAGGGAAGCTCAAGTCCTGTTATTCGAGTCCGGGGCACAGTGCATCGT ACATCATACATTGAGCACTGTTGGCGTGGCAGTATTGCCAAAGGTGGATCCCCTGTTTGTCGTG CTCGTTGTTTGCCTATAACAAAGGGCAGTGACATACCTTTACCGGATGTTATGAATTGCTCAGC TCGGACTGGATTGGATATGCTGGCGAAGCACTACGCAGATGCCACTGGATTTGACATTGTCTTT TTCTTGCCAGATAGTGAAGATGACTTTGTTTCTTATACTGAGTTCTTGCGTTACCTGGGCTCAA AAAGTCGGGCAGGGGTTGTAAAAGTTGATGCAGGGACTACATTATTTTTGGTTCCACCATCAGA TTTCCTAACAAATGTGTTACAAGTTGATGGTCCAGAGCGCCTTTATGGTGTGGTATTACACATT CCACAAATCTCTGCTGCTGCTGCACTGAGGCCACAGTTAACTGGGACCGAACAACAACCTTACT ATGATGAAAGGGGAACTCTGCCTACTTCACAAAGAAAGTATAGTATCATTTCTCCTAATGACAG TGGCCACCTTGATGCTGATTATCGGACATCTTTGCATGAGGATTCAATGCATCGGTTGGGGCAT ATTCCTGGAAGGCCTCGGGTGGATGAAGGACAAGCAGTTCAACCAGCTCTTGCAGGTTTTCCTG CTAATCAAGCAGCTGGGCTGCAAGTACAATCTTCACTCAAGCCTGACATTATGGCTACATTAGC AAAACTTCTGCCTAGTGTGCAATCGTCACCGCTGGTAAGTGGTCAGATGAATGCCATAGACAGA ACATCGCAGATACAGGATCCATCCATGCTTTCAAAAGTATGGAATCCTGAAAACCAAGTTACTG CTTCAAATTCATCCTTTGGGCAAATGGCTAATGTTCAGCATCCAGGACAGCAGTTTAGTGGCCA AGCTTCAGCTGCTCATTTGACAAACTATGGGAACATGGTGAGTGCTCAGGAGCGCTCAATACAA CATACTGCTTACAACCCTGAAGTTACTTTGAACTTGCCACCACCACCTCCACTTCCAACAATAC CACACAGTTCTGCTACATTACAGTCTCAAGGTGGCCACAGTTTGCCCTCACAGACAAACCAGCA ACTGTATCAGCCAGAGCAGTATTATGTGCCCCAAAACAACTATGGTCCATTAGTTCCAGTTAGC CATTCTAACCTTCAAATCAGCAACACTAACAACCCCACCCTTACCATCCCACAAGTGAACCCTG GACCTCCAACAAATAATCAGATTGGGAATTTGGCCCAGCCACAGCATTCTATGCCACTGCATGT TGATAGAGCAAGTCAGGATTTCTCTTCTCAGGGGCAACAACAAAATCGTGGTCCTGGTGCTGCA CAAGCTCCCGAGGAGGATAAAAGCAAGAAGTACCAGGCGACACTCCAGTTAGCTCAAAACCTAC TGCTTCAGTTACAGCAGCGTGGATCTGGAAATCAATCCTGAGACCTAATTATTGCTTCAG
|
Genomic sequence |
GCTAGAGCTGTTAGAAATCTGTGGGTTGGTGGCATTAGCCCATCGATTTCAAAGGAGGAGCTTG AGGGGGAGTTTCTGAAGTTCGGAAAAGTTGAAGGTGTTGCATTCTCCCAAGATCAGACTTCAGC ATACATAGATTTTGAGAAGCTTGAAGACGCAATTTCTGCTCACAGATCCTTGAATGGAAAAATG CTAGGTGGCAAGGAATTGTGTGTTGATTTCCAGAGGTCCAAGGGAAGAGCGGTGTGTGTCACAT TGTTGGCTGTATTTGTATTTCCTCCATTAAATTTTTATAGTGTTTTTCTTGTTATAACTTGTTT GTACTGATTTGTATAGGAATGGTCAGAAGCTAGCAGCTTCAATGGTAGAGTACCAGGGCCAGTG GGTGATAAGAGAGGCAGTGGCCCTCTGAAGGTATGCACTGTTTAGAGATATAGTTCTCATCTGT CATGTTGTTGGTCGTTCTCTTTTATCTGCTGATGTTGCTTACTATCATGTTCTGTTTACCTGGC AGAGTTCTGCTGGAGTGCGGATGCGAGAGGCACAGCCTACCAATGTTCTCTGGGTTGGTTTTCC AGGTTCTTATAGAGTCATTGATGAGGAGGCACTTAAGCATGCCATGTCAGTATTCGGTGTCGTT ACGAAGATAAAAGTTTTCCAGACAAGGCAGTATGCTTTTGTTGAGTTTGCAAATGTTGCGGAAG CTTGTAATGCTAAGATGAATCTAGATGGTCATCTTTTCAATGATCCCAGGATTCAGATTCTTTT CTCAAACAGTGGGCTTGCACCAAACAAATTGGACAACCCAACATCGGTTGCTGGATTTCCTAGT TCAGAAATCTATTCCAGTGATGGTCGTCTAGGCCCTGGTATTGGCAGTGGAACTTTGCAAGGGT ATGATCCACCAAGAGGAGGAAGAACAAGATATTACGATTATGCGGGTATGCCTACTCCAGGTGG TATCCTTTCACAACCTGAACCATTTGATCCAAGAGAAGCAAAAAGAATGAGGCTTGCTGCTGGT GCTGACCCTTACGATGTAAGGGCAGGCAGCACAGGTCTTTATTCTGCTGGATACCGTCATCAGG GCAGTTCTGTGCACGCTGAGGGAAGCTCAAGTCCTGTTATTCGAGTCCGGGGCACAGTGCATCG TACATCATACATTGAGCACTGTTGGCGTGGCAGTATTGCCAAAGGTGGATCCCCTGTTTGTCGT GCTCGTTGTTTGCCTATAACAAAGGGCAGTGACATACCTTTGTAAGTCCAAACATTGTTGCACA AATATTTGCTCTGTATAAAGTTGAATTGTGTATGTTTATGACCTTACTCTGCTAATCTAAACTT TGCAGACCGGATGTTATGAATTGCTCAGCTCGGACTGGATTGGATATGCTGGCGAAGCACTACG CAGATGCCACTGGATTTGACATTGTCTTTTTCTTGCCAGATAGTGAAGATGACTTTGTTTCTTA TACTGAGTTCTTGCGTTACCTGGGCTCAAAAAGTCGGGCAGGGGTTGTAAAAGTTGATGCAGGG ACTACATTATTTTTGGTTCCACCATCAGATTTCCTAACAAATGTGTTACAAGTTGATGGTCCAG AGCGCCTTTATGGTGTGGTATTACACATTCCACAAATCTCTGCTGCTGCTGCACTGAGGCCACA GTTAACTGGGACCGAACAACAACCTTACTATGATGAAAGGGGAACTCTGCCTACTTCACAAAGA AAGTATAGTATCATTTCTCCTAATGACAGTGGCCACCTTGATGCTGATTATCGGACATCTTTGC ATGAGGATTCAATGCATCGGTTGGGGCATATTCCTGGAAGGCCTCGGGTGGATGAAGGACAAGC AGTTCAACCAGCTCTTGCAGGTTTTCCTGCTAATCAAGCAGCTGGGCTGCAAGTACAATCTTCA CTCAAGCCTGACATTATGGCTACATTAGCAAAACTTCTGCCTAGTGTGCAATCGTCACCGCTGG TAAGTGGTCAGATGAATGCCATAGACAGAACATCGCAGATACAGGATCCATCCATGCTTTCAAA AGTATGGAATCCTGAAAACCAAGTTACTGCTTCAAATTCATCCTTTGGGCAAATGGCTAATGTT CAGCATCCAGGACAGCAGTTTAGTGGCCAAGCTTCAGCTGCTCATTTGACAAACTATGGGAACA TGGTGAGTGCTCAGGAGCGCTCAATACAACATACTGCTTACAACCCTGAAGTTACTTTGAACTT GCCACCACCACCTCCACTTCCAACAATACCACACAGTTCTGCTACATTACAGTCTCAAGGTGGC CACAGTTTGCCCTCACAGACAAACCAGCAACTGTATCAGCCAGAGCAGTATTATGTGCCCCAAA ACAACTATGGTCCATTAGTTCCAGTTAGCCATTCTAACCTTCAAATCAGCAACACTAACAACCC CACCCTTACCATCCCACAAGTGAACCCTGGACCTCCAACAAATAATCAGATTGGGAATTTGGCC CAGCCACAGCATTCTATGCCACTGCATGTTGATAGAGCAAGTCAGGATTTCTCTTCTCAGGGGC AACAACAAAATCGTGGTCCTGGTGCTGCACAAGCTCCCGAGGAGGATAAAAGCAAGAAGTACCA GGCGACACTCCAGTTAGCTCAAAACCTACTGCTTCAGTTACAGCAGCGTGGATCTGGAAATCAA TCCTGAGACCTAATTATTGCTTCAG |