Plant Circular RNA Database

Detail information of Os01g0514300_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os01g0514300_circ_g.3
					
						ID in PlantcircBase
						osa_circ_001945
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr1: 18166669-18169229  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os01g0514300						
					
						Parent gene annotation
						
							Armadillo-type fold domain containing protein. (Os01t0514300-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os01g0514300_circ_g.4 Os01g0514300_circ_g.5 Os01g0514300_circ_g.6 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os01t0514300-01:7

General Information
CircRNA Name	Os01g0514300_circ_g.3
ID in PlantcircBase	osa_circ_001945
Alias	NA
Organism	Oryza sativa
Position	chr1: 18166669-18169229 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os01g0514300
Parent gene annotation	Armadillo-type fold domain containing protein. (Os01t0514300-01)
Parent gene strand	+
Alternative splicing	Os01g0514300_circ_g.4 Os01g0514300_circ_g.5 Os01g0514300_circ_g.6
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os01t0514300-01:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ACAACTTGTTGAAGATTCTGCAACGGTTGTAAGGGAAGCTGCAACACATAACCTCACATTGCTG
CTTCCTCTGTTTCCAAATCTGGATAAATATTATAAGgttcctgatcaggaccttgatgtttgga
ttaacagttcagcttgtgtgcctgatgcccttcgtcgttactactatcagtatctttcatctac
cacagagg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1302
Transcript exons: 18166669-18166776,18167586-18167756,18167836-18168369,18
168465-18168539,18168615-18168743,18168866-18168940,1816
9020-18169229
GTTCCTGATCAGGACCTTGATGTTTGGATTAACAGTTCAGCTTGTGTGCCTGATGCCCTTCGTC
GTTACTACTATCAGTATCTTTCATCTACCACAGAGGCTGCAGAGGAAAAGATTTCTATTCTCCG
CGAAAATGAGACGCTACTGAAGGACAATGAAAGTCTTGGTGCTGAAAAAGATGCTTTGATAAAG
AGCAGGGAAGTGGCTAATAGTCAGATTGCTGCTTTAAGAAAGTCTTTGGAAGCTGCACACAAGG
ACATAAAAGAGAAGGAGAAAACGGTTCAAGACTTGAAGCAATCATTGGATGTCCAGAGGAAGGA
GTTGAATGATTGTAGAGCTGAAATTACGTCCCTTAAGATGCATATTGAAGGGACTAGGTCAAGT
AAACGATTATCTTCTGGAGATACTGATGGTTTAATTCCTGCCAATTCTATGGAAGAAATAGTAG
TGCTGAGCAGTGAACATGACAATCTAAAAGGATCCGAATCCATAACAAGTAAGCTAGCATCGGA
GGTGAGTCTAGCTGAGGGTAAAAAGAAAGATCATGAAAATATGGAAAGTAGCCTTGAAGGTTCC
CCAGGTCCAGAAGCAGAAGTTTCCTGCTCAACTGCTGAGAACAGTGGCTATGGCACTTCAGGAG
AAGATAAATCTGGCACAAACACTTGCTTTGAAGATTTATCTGTCAATGGCAATCTGCATGGATC
TGGTAATAGCCAGGGGGATTCAGATAGCATATCTGTTTATCTAACTGACGATAAAGTTCATACC
GAGAAAGTAGAGAGTCCTTATAAACAAAAATCATCAGATAAGATGGCTTTGGAGACTATCAAAA
TAGTTTCGGATGCTCTTCCAAAGATTGTTCCTTATGTGCTTATAAACCATCGTGAGGAGCTTCT
TCCGTTGATCATCTGTGCCATAGAAAAACATCCAGATAGTGATGTACGTGATTCCTTAACTCAT
ACGTTGTTCAATCTAATCAAACGTCCTGATGGACAACAGAGACGCATCATAATGGATGCTTGTG
TGGAGCTTGCTAAGAGTGTAGGTGAGATGAGGACAGAAACTGAGTTACTTCCACAATGTTGGGA
ACAGATAAATCACCAATATGAGGAGCGTAGGTTGCTTGTTGCCCAGTCCTGTGGAGAATTAGCA
GTATATGTTCGTCCTGAGATACGTGATTCCCTTATCTTATCCATTGTGCAACAACTTGTTGAAG
ATTCTGCAACGGTTGTAAGGGAAGCTGCAACACATAACCTCACATTGCTGCTTCCTCTGTTTCC
AAATCTGGATAAATATTATAAG
						
					

						Genomic sequence
						
							GTTCCTGATCAGGACCTTGATGTTTGGATTAACAGTTCAGCTTGTGTGCCTGATGCCCTTCGTC
GTTACTACTATCAGTATCTTTCATCTACCACAGAGGCTGCAGAGGTGATTCCATGGAGTTGCTT
AATGTTCCTACAAAAGCTGCTAATTGTTTACTGACTACAGCTTGATGCATTACAGTGTTACATG
CGACAATATTAGATCCTGGTACATGTTTGTTTTTAATTCCATCAATGTGTGCTAAGAATACACA
TTATATTTACTCCAAATCATATTGGAATGAATCTTTTCCTTACCAACATACTTCAATGAAAAGG
GCTGGAAATTTGTGGTAACTAGATCATATGCTTCATGCAATCCTTTGACAGAATCCAAGTAACG
TGCTAATAGGAAGGGCCTACATCATATTCAAGTTTAGTAATAATTACATTCTATGGAGTATGCA
TATAGTTGACACATTTATCTTATTCATGAACAATGTGCAATCCAGTTATAGTGACACAAAATGA
AATAAAACCGCTGCATAAGCCATGAGTCAATGTTCATTTCATAAAGTGCAGTGCAAGAGTATTT
TAAAATTGATTTTCGAGAATCAATAAGTAGCAGGATTTAGCATTCGATGCATTTGATATGTTTA
ACATTTTTCTGTGACCATTTTGAGGTATCACAATATTTGACTAGCCCTAGATGTTATTGCAGTA
ACAATCATAAACCTGGGGGTTTCTAGTGCATTTTAGATTCTTATCCAAGACTTGTATCATGGTC
CAACGTGATTAGGATCACTTGGTCATTCTTCGTAATTGGGAAAACAGGCACCACAGAAGTACAT
GACTGAGCATTAAAGACTCTGTTTTTCCTTGCAAGCCCATAACTTCCATATATTCTTAAGTCAT
CACTTTTATTACATATCACAGGAAAAGATTTCTATTCTCCGCGAAAATGAGACGCTACTGAAGG
ACAATGAAAGTCTTGGTGCTGAAAAAGATGCTTTGATAAAGAGCAGGGAAGTGGCTAATAGTCA
GATTGCTGCTTTAAGAAAGTCTTTGGAAGCTGCACACAAGGACATAAAAGAGAAGGAGAAAACG
GTAATGATCTCTCAGAAATAACCCAGTTATCTTATACTTCAATTCTTCTGAACATTGCTACACT
GACATTTTAAGAAAGGTTCAAGACTTGAAGCAATCATTGGATGTCCAGAGGAAGGAGTTGAATG
ATTGTAGAGCTGAAATTACGTCCCTTAAGATGCATATTGAAGGGACTAGGTCAAGTAAACGATT
ATCTTCTGGAGATACTGATGGTTTAATTCCTGCCAATTCTATGGAAGAAATAGTAGTGCTGAGC
AGTGAACATGACAATCTAAAAGGATCCGAATCCATAACAAGTAAGCTAGCATCGGAGGTGAGTC
TAGCTGAGGGTAAAAAGAAAGATCATGAAAATATGGAAAGTAGCCTTGAAGGTTCCCCAGGTCC
AGAAGCAGAAGTTTCCTGCTCAACTGCTGAGAACAGTGGCTATGGCACTTCAGGAGAAGATAAA
TCTGGCACAAACACTTGCTTTGAAGATTTATCTGTCAATGGCAATCTGCATGGATCTGGTAATA
GCCAGGGGGATTCAGATAGCATATCTGTTTATCTAACTGACGATAAAGTTCATACCGAGAAAGT
AGAGAGTCCTTATAAACAAAAATCATCAGATAAGATGGTTAGTGACTTGATATATATTCGGTCT
GTATGAAGTTTTCACATTTATTTCTTTGCAAATTTCATTAAGCAAACTATTTTTATCCAACCAT
GCAGGCTTTGGAGACTATCAAAATAGTTTCGGATGCTCTTCCAAAGATTGTTCCTTATGTGCTT
ATAAACCATCGTGAGGTTTACCTGTAACCCTTGTAGTTTGTTTCAATCTTTATATAAGTATAAC
TTATGTTACTTGCTGCACTGTTGTAGGAGCTTCTTCCGTTGATCATCTGTGCCATAGAAAAACA
TCCAGATAGTGATGTACGTGATTCCTTAACTCATACGTTGTTCAATCTAATCAAACGTCCTGAT
GGACAACAGAGACGCATCATAATGGATGTAAGTTCCTACAATTGCAATAATTGGTGCATGGCAC
ATGCACTTCTCATGATGCAGCTTGCAAACTTATAGTACTAGGTTAAATTGTGGTTATTCACATA
ACTGTTTTCCTCTTCACGCAGGCTTGTGTGGAGCTTGCTAAGAGTGTAGGTGAGATGAGGACAG
AAACTGAGTTACTTCCACAATGTTGGGAACAGGTATTTGACAATTTGTGGCAGATATTTTAACC
TTTTTAGGTATATAATATTACATAATGCTAAATTGGTTGATGTTTAGATAAATCACCAATATGA
GGAGCGTAGGTTGCTTGTTGCCCAGTCCTGTGGAGAATTAGCAGTATATGTTCGTCCTGAGATA
CGTGATTCCCTTATCTTATCCATTGTGCAACAACTTGTTGAAGATTCTGCAACGGTTGTAAGGG
AAGCTGCAACACATAACCTCACATTGCTGCTTCCTCTGTTTCCAAATCTGGATAAATATTATAA
G
						
					

			
		

Sequences
Splice junction sequence	ACAACTTGTTGAAGATTCTGCAACGGTTGTAAGGGAAGCTGCAACACATAACCTCACATTGCTG CTTCCTCTGTTTCCAAATCTGGATAAATATTATAAGgttcctgatcaggaccttgatgtttgga ttaacagttcagcttgtgtgcctgatgcccttcgtcgttactactatcagtatctttcatctac cacagagg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1302 Transcript exons: 18166669-18166776,18167586-18167756,18167836-18168369,18 168465-18168539,18168615-18168743,18168866-18168940,1816 9020-18169229 GTTCCTGATCAGGACCTTGATGTTTGGATTAACAGTTCAGCTTGTGTGCCTGATGCCCTTCGTC GTTACTACTATCAGTATCTTTCATCTACCACAGAGGCTGCAGAGGAAAAGATTTCTATTCTCCG CGAAAATGAGACGCTACTGAAGGACAATGAAAGTCTTGGTGCTGAAAAAGATGCTTTGATAAAG AGCAGGGAAGTGGCTAATAGTCAGATTGCTGCTTTAAGAAAGTCTTTGGAAGCTGCACACAAGG ACATAAAAGAGAAGGAGAAAACGGTTCAAGACTTGAAGCAATCATTGGATGTCCAGAGGAAGGA GTTGAATGATTGTAGAGCTGAAATTACGTCCCTTAAGATGCATATTGAAGGGACTAGGTCAAGT AAACGATTATCTTCTGGAGATACTGATGGTTTAATTCCTGCCAATTCTATGGAAGAAATAGTAG TGCTGAGCAGTGAACATGACAATCTAAAAGGATCCGAATCCATAACAAGTAAGCTAGCATCGGA GGTGAGTCTAGCTGAGGGTAAAAAGAAAGATCATGAAAATATGGAAAGTAGCCTTGAAGGTTCC CCAGGTCCAGAAGCAGAAGTTTCCTGCTCAACTGCTGAGAACAGTGGCTATGGCACTTCAGGAG AAGATAAATCTGGCACAAACACTTGCTTTGAAGATTTATCTGTCAATGGCAATCTGCATGGATC TGGTAATAGCCAGGGGGATTCAGATAGCATATCTGTTTATCTAACTGACGATAAAGTTCATACC GAGAAAGTAGAGAGTCCTTATAAACAAAAATCATCAGATAAGATGGCTTTGGAGACTATCAAAA TAGTTTCGGATGCTCTTCCAAAGATTGTTCCTTATGTGCTTATAAACCATCGTGAGGAGCTTCT TCCGTTGATCATCTGTGCCATAGAAAAACATCCAGATAGTGATGTACGTGATTCCTTAACTCAT ACGTTGTTCAATCTAATCAAACGTCCTGATGGACAACAGAGACGCATCATAATGGATGCTTGTG TGGAGCTTGCTAAGAGTGTAGGTGAGATGAGGACAGAAACTGAGTTACTTCCACAATGTTGGGA ACAGATAAATCACCAATATGAGGAGCGTAGGTTGCTTGTTGCCCAGTCCTGTGGAGAATTAGCA GTATATGTTCGTCCTGAGATACGTGATTCCCTTATCTTATCCATTGTGCAACAACTTGTTGAAG ATTCTGCAACGGTTGTAAGGGAAGCTGCAACACATAACCTCACATTGCTGCTTCCTCTGTTTCC AAATCTGGATAAATATTATAAG
Genomic sequence	GTTCCTGATCAGGACCTTGATGTTTGGATTAACAGTTCAGCTTGTGTGCCTGATGCCCTTCGTC GTTACTACTATCAGTATCTTTCATCTACCACAGAGGCTGCAGAGGTGATTCCATGGAGTTGCTT AATGTTCCTACAAAAGCTGCTAATTGTTTACTGACTACAGCTTGATGCATTACAGTGTTACATG CGACAATATTAGATCCTGGTACATGTTTGTTTTTAATTCCATCAATGTGTGCTAAGAATACACA TTATATTTACTCCAAATCATATTGGAATGAATCTTTTCCTTACCAACATACTTCAATGAAAAGG GCTGGAAATTTGTGGTAACTAGATCATATGCTTCATGCAATCCTTTGACAGAATCCAAGTAACG TGCTAATAGGAAGGGCCTACATCATATTCAAGTTTAGTAATAATTACATTCTATGGAGTATGCA TATAGTTGACACATTTATCTTATTCATGAACAATGTGCAATCCAGTTATAGTGACACAAAATGA AATAAAACCGCTGCATAAGCCATGAGTCAATGTTCATTTCATAAAGTGCAGTGCAAGAGTATTT TAAAATTGATTTTCGAGAATCAATAAGTAGCAGGATTTAGCATTCGATGCATTTGATATGTTTA ACATTTTTCTGTGACCATTTTGAGGTATCACAATATTTGACTAGCCCTAGATGTTATTGCAGTA ACAATCATAAACCTGGGGGTTTCTAGTGCATTTTAGATTCTTATCCAAGACTTGTATCATGGTC CAACGTGATTAGGATCACTTGGTCATTCTTCGTAATTGGGAAAACAGGCACCACAGAAGTACAT GACTGAGCATTAAAGACTCTGTTTTTCCTTGCAAGCCCATAACTTCCATATATTCTTAAGTCAT CACTTTTATTACATATCACAGGAAAAGATTTCTATTCTCCGCGAAAATGAGACGCTACTGAAGG ACAATGAAAGTCTTGGTGCTGAAAAAGATGCTTTGATAAAGAGCAGGGAAGTGGCTAATAGTCA GATTGCTGCTTTAAGAAAGTCTTTGGAAGCTGCACACAAGGACATAAAAGAGAAGGAGAAAACG GTAATGATCTCTCAGAAATAACCCAGTTATCTTATACTTCAATTCTTCTGAACATTGCTACACT GACATTTTAAGAAAGGTTCAAGACTTGAAGCAATCATTGGATGTCCAGAGGAAGGAGTTGAATG ATTGTAGAGCTGAAATTACGTCCCTTAAGATGCATATTGAAGGGACTAGGTCAAGTAAACGATT ATCTTCTGGAGATACTGATGGTTTAATTCCTGCCAATTCTATGGAAGAAATAGTAGTGCTGAGC AGTGAACATGACAATCTAAAAGGATCCGAATCCATAACAAGTAAGCTAGCATCGGAGGTGAGTC TAGCTGAGGGTAAAAAGAAAGATCATGAAAATATGGAAAGTAGCCTTGAAGGTTCCCCAGGTCC AGAAGCAGAAGTTTCCTGCTCAACTGCTGAGAACAGTGGCTATGGCACTTCAGGAGAAGATAAA TCTGGCACAAACACTTGCTTTGAAGATTTATCTGTCAATGGCAATCTGCATGGATCTGGTAATA GCCAGGGGGATTCAGATAGCATATCTGTTTATCTAACTGACGATAAAGTTCATACCGAGAAAGT AGAGAGTCCTTATAAACAAAAATCATCAGATAAGATGGTTAGTGACTTGATATATATTCGGTCT GTATGAAGTTTTCACATTTATTTCTTTGCAAATTTCATTAAGCAAACTATTTTTATCCAACCAT GCAGGCTTTGGAGACTATCAAAATAGTTTCGGATGCTCTTCCAAAGATTGTTCCTTATGTGCTT ATAAACCATCGTGAGGTTTACCTGTAACCCTTGTAGTTTGTTTCAATCTTTATATAAGTATAAC TTATGTTACTTGCTGCACTGTTGTAGGAGCTTCTTCCGTTGATCATCTGTGCCATAGAAAAACA TCCAGATAGTGATGTACGTGATTCCTTAACTCATACGTTGTTCAATCTAATCAAACGTCCTGAT GGACAACAGAGACGCATCATAATGGATGTAAGTTCCTACAATTGCAATAATTGGTGCATGGCAC ATGCACTTCTCATGATGCAGCTTGCAAACTTATAGTACTAGGTTAAATTGTGGTTATTCACATA ACTGTTTTCCTCTTCACGCAGGCTTGTGTGGAGCTTGCTAAGAGTGTAGGTGAGATGAGGACAG AAACTGAGTTACTTCCACAATGTTGGGAACAGGTATTTGACAATTTGTGGCAGATATTTTAACC TTTTTAGGTATATAATATTACATAATGCTAAATTGGTTGATGTTTAGATAAATCACCAATATGA GGAGCGTAGGTTGCTTGTTGCCCAGTCCTGTGGAGAATTAGCAGTATATGTTCGTCCTGAGATA CGTGATTCCCTTATCTTATCCATTGTGCAACAACTTGTTGAAGATTCTGCAACGGTTGTAAGGG AAGCTGCAACACATAACCTCACATTGCTGCTTCCTCTGTTTCCAAATCTGGATAAATATTATAA G

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.243187284

Conservation Information
Conserved circRNAs	NA
PMCS	0.243187284

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							18167915-18169226(+)
						
					

						Potential amino acid sequence
						
							MHIEGTRSSKRLSSGDTDGLIPANSMEEIVVLSSEHDNLKGSESITSKLASEVSLAEGKKKDHE
NMESSLEGSPGPEAEVSCSTAENSGYGTSGEDKSGTNTCFEDLSVNGNLHGSGNSQGDSDSISV
YLTDDKVHTEKVESPYKQKSSDKMALETIKIVSDALPKIVPYVLINHREELLPLIICAIEKHPD
SDVRDSLTHTLFNLIKRPDGQQRRIIMDACVELAKSVGEMRTETELLPQCWEQINHQYEERRLL
VAQSCGELAVYVRPEIRDSLILSIVQQLVEDSATVVREAATHNLTLLLPLFPNLDKYYKVPDQD
LDVWINSSACVPDALRRYYYQYLSSTTEAAEEKISILRENETLLKDNESLGAEKDALIKSREVA
NSQIAALRKSLEAAHKDIKEKEKTVQDLKQSLDVQRKELNDCRAEITSLKMHIEGTRSSKRLSS
GDTDGLIPANSMEEIVVLSSEHDNLKGSESITSKLASEVSLAEGKKKDHENMESSLEGSPGPEA
EVSCSTAENSGYGTSGEDKSGTNTCFEDLSVNGNLHGSGNSQGDSDSISVYLTDDKVHTEKVES
PYKQKSSDKMALETIKIVSDALPKIVPYVLINHREELLPLIICAIEKHPDSDVRDSLTHTLFNL
IKRPDGQQRRIIMDACVELAKSVGEMRTETELLPQCWEQINHQYEERRLLVAQSCGELAVYVRP
EIRDSLILSIVQQLVEDSATVVREAATHNLTLLLPLFPNLDKYYKVPDQDLDVWINSSACVPDA
LRRYYYQYLSSTTEAAEEKISILRENETLLKDNESLGAEKDALIKSREVANSQIAALRKSLEAA
HKDIKEKEKTVQDLKQSLDVQRKELNDCRAEITSLKMHIEGTRSSKRLSSGDTDGLIPANSMEE
IVVLSSEHDNLKGSESITSKLASEVSLAEGKKKDHENMESSLEGSPGPEAEVSCSTAENSGYGT
SGEDKSGTNTCFEDLSVNGNLHGSGNSQGDSDSISVYLTDDKVHTEKVESPYKQKSSDKMALET
IKIVSDALPKIVPYVLINHREELLPLIICAIEKHPDSDVRDSLTHTLFNLIKRPDGQQRRIIMD
ACVELAKSVGEMRTETELLPQCWEQINHQYEERRLLVAQSCGELAVYVRPEIRDSLILSIVQQL
VEDSATVVREAATHNLTLLLPLFPNLDKYYKVPDQDLDVWINSSACVPDALRRYYYQYLSSTTE
AAEEKISILRENETLLKDNESLGAEKDALIKSREVANSQIAALRKSLEAAHKDIKEKEKTVQDL
KQSLDVQRKELNDCRAEITSLKMHIEGTRSSKRLSSGDTDGLIPANSMEEIVVLSSEHDNLKGS
ESITSKLASEVSLAEGKKKDHENMESSLEGSPGPEAEVSCSTAENSGYGTSGEDKSGTNTCFED
LSVNGNLHGSGNSQGDSDSISVYLTDDKVHTEKVESPYKQKSSDKMALETIKIVSDALPKIVPY
VLINHREELLPLIICAIEKHPDSDVRDSLTHTLFNLIKRPDGQQRRIIMDACVELAKSVGEMRT
ETELLPQCWEQINHQYEERRLLVAQSCGELAVYVRPEIRDSLILSIVQQLVEDSATVVREAATH
NLTLLLPLFPNLDKYYK(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	18167915-18169226(+)
Potential amino acid sequence	MHIEGTRSSKRLSSGDTDGLIPANSMEEIVVLSSEHDNLKGSESITSKLASEVSLAEGKKKDHE NMESSLEGSPGPEAEVSCSTAENSGYGTSGEDKSGTNTCFEDLSVNGNLHGSGNSQGDSDSISV YLTDDKVHTEKVESPYKQKSSDKMALETIKIVSDALPKIVPYVLINHREELLPLIICAIEKHPD SDVRDSLTHTLFNLIKRPDGQQRRIIMDACVELAKSVGEMRTETELLPQCWEQINHQYEERRLL VAQSCGELAVYVRPEIRDSLILSIVQQLVEDSATVVREAATHNLTLLLPLFPNLDKYYKVPDQD LDVWINSSACVPDALRRYYYQYLSSTTEAAEEKISILRENETLLKDNESLGAEKDALIKSREVA NSQIAALRKSLEAAHKDIKEKEKTVQDLKQSLDVQRKELNDCRAEITSLKMHIEGTRSSKRLSS GDTDGLIPANSMEEIVVLSSEHDNLKGSESITSKLASEVSLAEGKKKDHENMESSLEGSPGPEA EVSCSTAENSGYGTSGEDKSGTNTCFEDLSVNGNLHGSGNSQGDSDSISVYLTDDKVHTEKVES PYKQKSSDKMALETIKIVSDALPKIVPYVLINHREELLPLIICAIEKHPDSDVRDSLTHTLFNL IKRPDGQQRRIIMDACVELAKSVGEMRTETELLPQCWEQINHQYEERRLLVAQSCGELAVYVRP EIRDSLILSIVQQLVEDSATVVREAATHNLTLLLPLFPNLDKYYKVPDQDLDVWINSSACVPDA LRRYYYQYLSSTTEAAEEKISILRENETLLKDNESLGAEKDALIKSREVANSQIAALRKSLEAA HKDIKEKEKTVQDLKQSLDVQRKELNDCRAEITSLKMHIEGTRSSKRLSSGDTDGLIPANSMEE IVVLSSEHDNLKGSESITSKLASEVSLAEGKKKDHENMESSLEGSPGPEAEVSCSTAENSGYGT SGEDKSGTNTCFEDLSVNGNLHGSGNSQGDSDSISVYLTDDKVHTEKVESPYKQKSSDKMALET IKIVSDALPKIVPYVLINHREELLPLIICAIEKHPDSDVRDSLTHTLFNLIKRPDGQQRRIIMD ACVELAKSVGEMRTETELLPQCWEQINHQYEERRLLVAQSCGELAVYVRPEIRDSLILSIVQQL VEDSATVVREAATHNLTLLLPLFPNLDKYYKVPDQDLDVWINSSACVPDALRRYYYQYLSSTTE AAEEKISILRENETLLKDNESLGAEKDALIKSREVANSQIAALRKSLEAAHKDIKEKEKTVQDL KQSLDVQRKELNDCRAEITSLKMHIEGTRSSKRLSSGDTDGLIPANSMEEIVVLSSEHDNLKGS ESITSKLASEVSLAEGKKKDHENMESSLEGSPGPEAEVSCSTAENSGYGTSGEDKSGTNTCFED LSVNGNLHGSGNSQGDSDSISVYLTDDKVHTEKVESPYKQKSSDKMALETIKIVSDALPKIVPY VLINHREELLPLIICAIEKHPDSDVRDSLTHTLFNLIKRPDGQQRRIIMDACVELAKSVGEMRT ETELLPQCWEQINHQYEERRLLVAQSCGELAVYVRPEIRDSLILSIVQQLVEDSATVVREAATH NLTLLLPLFPNLDKYYK(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os01g0514300_circ_g.3

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