Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G06670_circ_g.1 |
ID in PlantcircBase | ath_circ_001007 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 2041075-2041704 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | CIRCexplorer, KNIFE, PcircRNA_finder |
Parent gene | AT1G06670 |
Parent gene annotation |
DExH-box ATP-dependent RNA helicase DExH2 |
Parent gene strand | + |
Alternative splicing | AT1G06670_circ_g.2 |
Support reads | 16 |
Tissues | whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT1G06670.2:2 AT1G06670.1:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.113888888 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |