Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G03620_circ_g.1 |
ID in PlantcircBase | ath_circ_000449 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 904728-906023 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | CIRCexplorer, PcircRNA_finder |
Parent gene | AT1G03620 |
Parent gene annotation |
ELMO/CED-12 family protein |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | 1 |
Tissues | whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G03620.10:7 AT1G03620.1:7 AT1G03620.6:6 AT1G03620.11:7 AT1G03620.12:7 AT1G03620.4:7 AT1G03620.7:7 AT1G03620.9:7 AT1G03620.8:7 AT1G03620.13:7 AT1G03620.3:7 AT1G03620.5:7 AT1G03620.2:6 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.13698624 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chu et al., 2017 |