Splice junction sequence |
GCAGAAAAAATACCTGTTCAAAACCAAGAACCAGATTTGCCCATTCAATATCTCTTGTAACCAG CAAATTCGATCGTGCAAGCAGAGTTGCAATTTTGGCcccaggtataaatcataaattcttctcc atagatgccatcgtcgatgaacaacaccaatttcctacaccagtaccagacatgacaatgagct gaaattaa
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 359 Transcript exons: 1737690-1737751,1737842-1737898,1737992-1738057,1738787- 1738831,1738973-1739014,1739207-1739293 CCCAGGTATAAATCATAAATTCTTCTCCATAGATGCCATCGTCGATGAACAACACCAATTTCCT CTCCATCAATTTCAGCATATATTGAACTTGTGAGCCACCAGAAAGGTCGACGAACCCGGAAAAG CTCATTACCCAAAGCATCAGTTATGGAAGCAACAAATGGGCGCCGGGTACGAAGCAGCTGCCGC GCCAGTAAATTGCTTTGTTCTCGGATAGACCCCACAGGTGCCTCAGGATAGCAAACATCTACTA CAATATAGCGATTTTCCTGTTCAAAACCAAGAACCAGATTTGCCCATTCAATATCTCTTGTAAC CAGCAAATTCGATCGTGCAAGCAGAGTTGCAATTTTGGC
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Genomic sequence |
CCCAGGTATAAATCATAAATTCTTCTCCATAGATGCCATCGTCGATGAACAACACCAATTTCCT ACACCAGTACCAGACATGACAATGAGCTGAAATTAAACAGTTAACATTGGAGTACAGTTTAAAG GCTTGAAATCCTACGCAAGTGTACCTCTCCATCAATTTCAGCATATATTGAACTTGTGAGCCAC CAGAAAGGTCGACGAACCTAAACGATGTAGAGGAATTATTTCAGCTCCAAAGAAATTCAACAAT TCTCTTGCCGGAAACTTTCAAACAACAGAATGTAAGAAAACCTCACCCGGAAAAGCTCATTACC CAAAGCATCAGTTATGGAAGCAACAAATGGGCGCCGGGTACGAAGCAGCTGCAAATATATTTAA TATCACATGTGAATGGTTTTTATCATTTAAGTCGACACATATGAAAATCACTGCCAACACAATA TGTATCTGAATACAATCTCGGAGGTAGAACAGAATCAGATCTATTCTAAGTTCATGGGGATAAC TGATAGAGGCGACACAAGCTTTGAGTGAGTAATGTTACATTTACTATTATGAAGACTCAAGAAC ATGGTTTTTAAGCAAACCTATCATTGCTTGCTTAAAGTTGCAATATCAGCGCACTTCGTCCAAA CATAAAAAATAGGAAACAAAAGACTAGATAAGGAAAACGAAATAGCACATGCAACTGAGGAAAA ATAGATAGCTAGCAACAGGAATTTCAATGAGGAAAAAAATCACAGTATGCACCTTCCTGAGAGA AAGATGTTCAAACAACAAATCAAAAATTTCTACTGGAGAATCTAACGCGTGAAAAGAAGTGAAG CCTCAACAATCAAAGTTGAACCTAGACAATCAATTATTCAAAGAAAGTTCAAGCCTTCCCATTC ATATGCTCATATAAGGAAAAAAAAAAAGTGCAGACATGCTAACCAAGTATACTCATAACTAGTT AGGAATAGCAATGAATTGTGTTGTAACACGTCAAAACTTAAAAACACTGCTCATTGGTGACAGC CAATTTAAAGTATTAACACATAATGATATTAGTTGAGGTATGGAGAAAGAAAATTTCAGAGTGA GAATGTAACCTGCCGCGCCAGTAAATTGCTTTGTTCTCGGATAGACCCCACAGGCTGTCAAGAA AGTGAGAAAAAAGAGGTTTGAAATTCGCAAAATTTTATATGAACTCAAGGTCTTATGTAATAGT AGTGCCCTCCACAATCAAAACTTCCGTAAACGAAAGCCTAGAATCTATGCGTTGAGATAGCACT TACTGCCTCAGGATAGCAAACATCTACTACAATATAGCGATTTTCCTGCAGAAACAAAAGTAGA TTACAAGAGTGGTATATCAGATATATGTGGAGAGGAAGGAGATGAAACGGTAGGAATTAACGGG ACATTTGATATGTAAAAGTTACAAACATGGTATGATTAGTTCATCAGAAACAAGTAACAACGGT ATTACATAGCCAAATGAGGAACATGAGAATTGGCAGAAAAAATACCTGTTCAAAACCAAGAACC AGATTTGCCCATTCAATATCTCTTGTAACCAGCAAATTCGATCGTGCAAGCAGAGTTGCAATTT TGGC |