Plant Circular RNA Database

Detail information of Zm00001d050333_circ_g.3

			
						 General Information
					
						CircRNA Name
						Zm00001d050333_circ_g.3
					
						ID in PlantcircBase
						zma_circ_008060
					
						Alias
						Zm04circ00041, GRMZM5G851815_C1
					
						Organism
						
							Zea mays						
					
						Position
						
							chr4: 81921339-81925688  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Zm00001d050333						
					
						Parent gene annotation
						
							Lycopene beta/epsilon cyclase protein
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d050333_circ_g.2 						
					
						Support reads
						NA
					
						Tissues
						leaf, endosperm
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d050333_T001:2

General Information
CircRNA Name	Zm00001d050333_circ_g.3
ID in PlantcircBase	zma_circ_008060
Alias	Zm04circ00041, GRMZM5G851815_C1
Organism	Zea mays
Position	chr4: 81921339-81925688 JBrowse»
Reference genome	AGPv4.38
Type	e-circRNA
Identification method	CIRI2
Parent gene	Zm00001d050333
Parent gene annotation	Lycopene beta/epsilon cyclase protein
Parent gene strand	+
Alternative splicing	Zm00001d050333_circ_g.2
Support reads	NA
Tissues	leaf, endosperm
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d050333_T001:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTGCGCTCATGGATTCGAAAAAAATACAACAAGTGATATTATTTTCAGTAGCTCATCAGTGAAA
AGAGCTGGGAATTCAGGAGTACAGCTCTTTTGGGAGgcctgctaaacttgttgagaacatgaaa
gaacgcttcatttcttcgggaggagcaatatttgaggagaaaagtctatcaagcatttatgtct
atgatgat

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 298
Transcript exons: 81921339-81921463,81925516-81925688
GCCTGCTAAACTTGTTGAGAACATGAAAGAACGCTTCATTTCTTCGGGAGGAGCAATATTTGAG
GAGAAAAGTCTATCAAGCATTTATGTCTATGATGATCTCGCTGTAAGCAAAATTATATTTTTTA
CGACTCTTCTGTCCTTGTGCAAGATCCGGTCTGGTAGAAAACCAGATGGAATGTGCCTTGTTGT
TGGTGCTTGCGCTCATGGATTCGAAAAAAATACAACAAGTGATATTATTTTCAGTAGCTCATCA
GTGAAAAGAGCTGGGAATTCAGGAGTACAGCTCTTTTGGGAG
						
					

						Genomic sequence
						
							GCCTGCTAAACTTGTTGAGAACATGAAAGAACGCTTCATTTCTTCGGGAGGAGCAATATTTGAG
GAGAAAAGTCTATCAAGCATTTATGTCTATGATGATCTCGCTGTAAGCAAAATTATATTTTGTC
CCCCCTGGCCATAGTAAAACTGTTTCAATGGACTGGAGATTTCTAAATTCTGTTAGTCTTTTGC
CATAAAAATTTATAAATAAATAGATTGTCTTGCATTGTCTTCATATCTGATTTTCGAAATATAA
TTATGCTACTTGACTGATATAATAAGCTTATACTCCCTTCGTCCCATAAAGAGTTTCATTGTAA
CATTCAAATTTTGTCCCCACAAAGAATGCCACTGTAGGCAAACGTGTGTATCCTATCTAGGTAC
TTTTGAGGCCAACCCACAAACAAAGGCTCCATAGGCAAACTTCTGTAGAGGTAACTCTCTTTGT
GGGACAGAGGGAGTATGTTGTTAACGAAACCATTCTAGTTATTAGGTATATTTTTCCATTTCTT
TCAAATCTATGTATTTAGAGGTAAATCAGTAAATATTGTTTGTGTCATTTTGGCATTAGATATT
GCATATTTCCAAACAAGGATATCATTTCATGCTATTTTTTTTTTCTTGAACGCGCAGGAGAGCT
GCGCATCATTATATTAAGAGAAGAAAAGGGTCCAAAGTGGACCAAAGTACAAAGCCCAAAAGGC
AGAACAAACAGACCCACCAACCTCCTGCTGTGCACAGTGCCCCAACCTCCAACAAAAGGAGGCA
AACAGCAAACGTGCCAACAGGCCCCCCACACACACCTGCACTACTCACCCAGAAACTCCCTGGA
CCTAATAATGGCAGCACCTAGGCCTAAGCCCTCAAGATGCTTGGCACCGGCTAGACCCCAACAT
TCTAACTCTTCCAAGAAAACTTTTTGAATTCTGCTTATGGAAGGACTGACACCCTCGAAAACTG
CCTTATTACGATGAATCCATAAACACCAAGCCCCCATGATGATGACGCTGTTAATGCCTCTTCT
TTTGGGTTTGTGCACTTGCTTACACACCTTCCTCCACCACTCAGCAAAAGATATCTCAATAGAA
GCAGGAGAAAGATTAGCAAGCCCCAACGGTGCAAGAATGCAATGTCAAAACTGTCTAGCAAAGA
TGCAACTGCAAAGGAGATGTTGGATATTCTCCGGCTCCTGATCACATAGAGGACAAACCTCAAG
ATGATCCAGCCCTCTCTTCTGAAGTCTATCAGCTGTCCAACATTTATTCCTTATTGCCAACCAT
AGGAAGAATTTGCATTTGGGTGGAGCCCAAGATTTCCATAACCTCTTCCAAGGTTCAAAGGTAA
CCGAACCCATGAAAAAAGCCTTATAGCATGATCTAGAAGAGAACTGCCCAGAGGAAGAATGAAT
CCACACATGTCTATCAGCCTCTTGTGTGAGCACCACTCCTCTTAAAGCGTCCCAAAGCTGTAGG
TACTGCTGCAGCCCAATCAAATTAAGAGGGGTCTCTAAGTCGCTGACCCACTGCCAGTTCTCAA
GAACATGGGCCACCGTTCTGGAAGAACTAGCCCTTTTCCCAACACTAGCAACTACATCAGGGGC
AAGATCCTGGATACAAGACCCATCCAACCACCTATCTGTCCAGAATAAAGTAGTAGACCCGTCT
CCAACCAAGGTAATAATTGAAGAAGCAAAGAATCTCCTGACATGCTGCTGAATAGGGAATTTCA
GCCCAACCCAAGGCCTATTTGGATCTGTTTTTTCCAACCATAACCATTTAGTCTGCAGCGCCCA
GCTTTGGTAAAGTAAGTTAGAAATCCCAAGGCCACCAAGATATAAAGGCCTTGTAATTATATCC
CAAGAGACAAGACAACAACCTCCAGTTACCTCCTTTCTTCCTTTCCAAAGAAATCCTCTTCGAA
TCTTATCTATAGAATTAATCACCCACTTGGGAATATTCATGGCAATGAGAAGGTATACCGGGAT
GGCCGAAAGCACGAAGCGCACTATAGCTGTCCTGCCAGCCAGATTAAGCAGCCAGGCCTTCCAA
TTAGGAAGCCGATCAGCAATTTTGTCGACCCAAACCATGAGATCATTCCTTCTGAGCTTCTTGT
CTGATATCGGCAAGCCCAAATAAGTGCAAGGGAAAGATGAAGAAGAGCACTGAAGAATATTGCA
GCCCACCTGCACCGCTTGCTGATTACACCTAATTGGAATAACATAGCTTTTTTGCAAGTTAGAC
ACCAACCCAGAGGCTGAACCAAAGCAATCCAAAATTGTTCTGACGCAGTGAAGATCTTCCTCAA
AAGGCTGAACAAAAAGGACTACATCATCAGCATAAATGGACAGCCTGTTTCGAATATTAGCGCC
CTCCAATCTATGCAGCAGCCCCCTGTTTTCAGCCAGCTTGAATAAACTGTTGAGCACATCCATA
ACCAAGACGAACAACATAGGAGAAAGAGGATCCCCCTGGCGAAGCCCTCTCCGGTGCTTAATAG
GAATACCAGGAGACCCATTCAAAAGCACCTGAGTGGAGGACGAGGTCAGCAAATTTGAAATCAT
ACTTCGCCACACAGGACCAAAACCAAGATGTGAAAGCACTTCAGTCAAAAAAGCCCAAGAAACT
GAATCAAAGGCTTTGGAGATATCCAACTTCAAGAACAAACTAGAGACTTTCTTCTTGTGGAGAG
ATTTAATTGAATGCTGCACCAACATGAAGTTGTCATGAATCGATCTTCCTCTCACAAAAGCACT
TTGGTTAGCAGCCACCAACTCCTGTAGGTGAGGACCCAACCTATTAGCAAGCATTTTGGTGACC
AACTTAGCAAAACTATGAATTAAGCTAATTGGTCTAAAGTCCCTTGCTGTCAAGGCATCAATTT
TCTTAGGAAGAAGAGCTATAAAAGCAGAATTCAGCATCCCCAACTTGTAAGCATTTCCTTGATG
AAGCGAATTTATAGCTGCCAACAAATCTGACTTACTAATATGCCAACAACGCTTATAAAACCTC
CCTGTAAACCCATCAGGACCAGGAGCCTTATCAGAGGGGAGAGCTCCAATCGTGTCTTGAACCT
CCTTTTCCGAGAAAGGAGCCTCCAGGAGACTCAAATCAATAGCATCTCTATGGCAACTAGCCAG
ATCAAGAGTAAAAGGCCTCTGGACAATAGAACCCAAAAGATTGGAAAAGAAATCATCCAGAACT
TCCTGCATCTGATCATGGCTGGTGACTAACCTTCCCTCATCCTCCAAATGAGAGATAAAATTCC
TCTTCTTGCGGTGGCGAGCCTGCAAGTGGAAAAATTTTGTGTTGGCATCTCCTTCCCTCAAATA
ATGGAATTTCATGCTATTTTTGCAGGTACTGAAACTTAGTGATGGTGATTCTTTGTCTTGCCGA
CTTGTTGTTGATGCTATGGGAAATTTTTCTCCAATAGTACGGCAGGTATTCAAAGTCACATCAT
AACTTAGCCATATTCTCCCTTGTTTTTTTCTCGAACTTGTTGAAATTAGAAATCTGTTGGTTGT
GGCAACTGGTAACCACACTTCTCAAAGCTCCTTTAATTTTATTGTATGGTCCCTTGTCACCGTA
TCTGTCTACATGAGACTCACCTCATAAAATCTTTCACTTAGTATATTAAAACGGTAGCTTTCAA
TTGTTATAGTCCAGTTATACATTTCAGCATGTGCTGATGCCTATAAGGTTTTGTTGTCATGTCA
CCCTAATTCATTCTTGTGCCACTTTTGATTTCAATGATGCACCCTGAATAGTTGCTGAGCTTGA
ACAGTATGATAAGTTCAGTAGTATACCAGGAGCGGCTAAGCATATTTGGGCTGCCATGTGCCAC
TTTGCAAACCAAGTTCCATGCTTACATTACAGAAGTAGCTTTAGCGCAAAGTTTTTATTGATTA
CAGCTCTATGCATCAAAGATAAAAAATGGAAACGAAACTTTGTTTTCGTTATTTAACTAAAAGA
GAAGCTTTGAGTCTTTGATATACAGGCGCAAGTAAAAAATAGCATTTCCTATGTGTTTCAAACA
TCCATAGGGAAATCTGAAATAGCCATGAGATTCATTTCATCTAAATTCGAGATCATTGAACAGT
GTGCCTGAATCTGATTTGCTTCTATTAGTAGTATATCCATCTTACCGTTGCAACCATTTCCTGA
TTCCATCTACAAGTTAGTTACGACTCTTCTGTCCTTGTGCAAGATCCGGTCTGGTAGAAAACCA
GATGGAATGTGCCTTGTTGTTGGTGCTTGCGCTCATGGATTCGAAAAAAATACAACAAGTGATA
TTATTTTCAGTAGCTCATCAGTGAAAAGAGCTGGGAATTCAGGAGTACAGCTCTTTTGGGAG
						
					

			
		

Sequences
Splice junction sequence	TTGCGCTCATGGATTCGAAAAAAATACAACAAGTGATATTATTTTCAGTAGCTCATCAGTGAAA AGAGCTGGGAATTCAGGAGTACAGCTCTTTTGGGAGgcctgctaaacttgttgagaacatgaaa gaacgcttcatttcttcgggaggagcaatatttgaggagaaaagtctatcaagcatttatgtct atgatgat
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 298 Transcript exons: 81921339-81921463,81925516-81925688 GCCTGCTAAACTTGTTGAGAACATGAAAGAACGCTTCATTTCTTCGGGAGGAGCAATATTTGAG GAGAAAAGTCTATCAAGCATTTATGTCTATGATGATCTCGCTGTAAGCAAAATTATATTTTTTA CGACTCTTCTGTCCTTGTGCAAGATCCGGTCTGGTAGAAAACCAGATGGAATGTGCCTTGTTGT TGGTGCTTGCGCTCATGGATTCGAAAAAAATACAACAAGTGATATTATTTTCAGTAGCTCATCA GTGAAAAGAGCTGGGAATTCAGGAGTACAGCTCTTTTGGGAG
Genomic sequence	GCCTGCTAAACTTGTTGAGAACATGAAAGAACGCTTCATTTCTTCGGGAGGAGCAATATTTGAG GAGAAAAGTCTATCAAGCATTTATGTCTATGATGATCTCGCTGTAAGCAAAATTATATTTTGTC CCCCCTGGCCATAGTAAAACTGTTTCAATGGACTGGAGATTTCTAAATTCTGTTAGTCTTTTGC CATAAAAATTTATAAATAAATAGATTGTCTTGCATTGTCTTCATATCTGATTTTCGAAATATAA TTATGCTACTTGACTGATATAATAAGCTTATACTCCCTTCGTCCCATAAAGAGTTTCATTGTAA CATTCAAATTTTGTCCCCACAAAGAATGCCACTGTAGGCAAACGTGTGTATCCTATCTAGGTAC TTTTGAGGCCAACCCACAAACAAAGGCTCCATAGGCAAACTTCTGTAGAGGTAACTCTCTTTGT GGGACAGAGGGAGTATGTTGTTAACGAAACCATTCTAGTTATTAGGTATATTTTTCCATTTCTT TCAAATCTATGTATTTAGAGGTAAATCAGTAAATATTGTTTGTGTCATTTTGGCATTAGATATT GCATATTTCCAAACAAGGATATCATTTCATGCTATTTTTTTTTTCTTGAACGCGCAGGAGAGCT GCGCATCATTATATTAAGAGAAGAAAAGGGTCCAAAGTGGACCAAAGTACAAAGCCCAAAAGGC AGAACAAACAGACCCACCAACCTCCTGCTGTGCACAGTGCCCCAACCTCCAACAAAAGGAGGCA AACAGCAAACGTGCCAACAGGCCCCCCACACACACCTGCACTACTCACCCAGAAACTCCCTGGA CCTAATAATGGCAGCACCTAGGCCTAAGCCCTCAAGATGCTTGGCACCGGCTAGACCCCAACAT TCTAACTCTTCCAAGAAAACTTTTTGAATTCTGCTTATGGAAGGACTGACACCCTCGAAAACTG CCTTATTACGATGAATCCATAAACACCAAGCCCCCATGATGATGACGCTGTTAATGCCTCTTCT TTTGGGTTTGTGCACTTGCTTACACACCTTCCTCCACCACTCAGCAAAAGATATCTCAATAGAA GCAGGAGAAAGATTAGCAAGCCCCAACGGTGCAAGAATGCAATGTCAAAACTGTCTAGCAAAGA TGCAACTGCAAAGGAGATGTTGGATATTCTCCGGCTCCTGATCACATAGAGGACAAACCTCAAG ATGATCCAGCCCTCTCTTCTGAAGTCTATCAGCTGTCCAACATTTATTCCTTATTGCCAACCAT AGGAAGAATTTGCATTTGGGTGGAGCCCAAGATTTCCATAACCTCTTCCAAGGTTCAAAGGTAA CCGAACCCATGAAAAAAGCCTTATAGCATGATCTAGAAGAGAACTGCCCAGAGGAAGAATGAAT CCACACATGTCTATCAGCCTCTTGTGTGAGCACCACTCCTCTTAAAGCGTCCCAAAGCTGTAGG TACTGCTGCAGCCCAATCAAATTAAGAGGGGTCTCTAAGTCGCTGACCCACTGCCAGTTCTCAA GAACATGGGCCACCGTTCTGGAAGAACTAGCCCTTTTCCCAACACTAGCAACTACATCAGGGGC AAGATCCTGGATACAAGACCCATCCAACCACCTATCTGTCCAGAATAAAGTAGTAGACCCGTCT CCAACCAAGGTAATAATTGAAGAAGCAAAGAATCTCCTGACATGCTGCTGAATAGGGAATTTCA GCCCAACCCAAGGCCTATTTGGATCTGTTTTTTCCAACCATAACCATTTAGTCTGCAGCGCCCA GCTTTGGTAAAGTAAGTTAGAAATCCCAAGGCCACCAAGATATAAAGGCCTTGTAATTATATCC CAAGAGACAAGACAACAACCTCCAGTTACCTCCTTTCTTCCTTTCCAAAGAAATCCTCTTCGAA TCTTATCTATAGAATTAATCACCCACTTGGGAATATTCATGGCAATGAGAAGGTATACCGGGAT GGCCGAAAGCACGAAGCGCACTATAGCTGTCCTGCCAGCCAGATTAAGCAGCCAGGCCTTCCAA TTAGGAAGCCGATCAGCAATTTTGTCGACCCAAACCATGAGATCATTCCTTCTGAGCTTCTTGT CTGATATCGGCAAGCCCAAATAAGTGCAAGGGAAAGATGAAGAAGAGCACTGAAGAATATTGCA GCCCACCTGCACCGCTTGCTGATTACACCTAATTGGAATAACATAGCTTTTTTGCAAGTTAGAC ACCAACCCAGAGGCTGAACCAAAGCAATCCAAAATTGTTCTGACGCAGTGAAGATCTTCCTCAA AAGGCTGAACAAAAAGGACTACATCATCAGCATAAATGGACAGCCTGTTTCGAATATTAGCGCC CTCCAATCTATGCAGCAGCCCCCTGTTTTCAGCCAGCTTGAATAAACTGTTGAGCACATCCATA ACCAAGACGAACAACATAGGAGAAAGAGGATCCCCCTGGCGAAGCCCTCTCCGGTGCTTAATAG GAATACCAGGAGACCCATTCAAAAGCACCTGAGTGGAGGACGAGGTCAGCAAATTTGAAATCAT ACTTCGCCACACAGGACCAAAACCAAGATGTGAAAGCACTTCAGTCAAAAAAGCCCAAGAAACT GAATCAAAGGCTTTGGAGATATCCAACTTCAAGAACAAACTAGAGACTTTCTTCTTGTGGAGAG ATTTAATTGAATGCTGCACCAACATGAAGTTGTCATGAATCGATCTTCCTCTCACAAAAGCACT TTGGTTAGCAGCCACCAACTCCTGTAGGTGAGGACCCAACCTATTAGCAAGCATTTTGGTGACC AACTTAGCAAAACTATGAATTAAGCTAATTGGTCTAAAGTCCCTTGCTGTCAAGGCATCAATTT TCTTAGGAAGAAGAGCTATAAAAGCAGAATTCAGCATCCCCAACTTGTAAGCATTTCCTTGATG AAGCGAATTTATAGCTGCCAACAAATCTGACTTACTAATATGCCAACAACGCTTATAAAACCTC CCTGTAAACCCATCAGGACCAGGAGCCTTATCAGAGGGGAGAGCTCCAATCGTGTCTTGAACCT CCTTTTCCGAGAAAGGAGCCTCCAGGAGACTCAAATCAATAGCATCTCTATGGCAACTAGCCAG ATCAAGAGTAAAAGGCCTCTGGACAATAGAACCCAAAAGATTGGAAAAGAAATCATCCAGAACT TCCTGCATCTGATCATGGCTGGTGACTAACCTTCCCTCATCCTCCAAATGAGAGATAAAATTCC TCTTCTTGCGGTGGCGAGCCTGCAAGTGGAAAAATTTTGTGTTGGCATCTCCTTCCCTCAAATA ATGGAATTTCATGCTATTTTTGCAGGTACTGAAACTTAGTGATGGTGATTCTTTGTCTTGCCGA CTTGTTGTTGATGCTATGGGAAATTTTTCTCCAATAGTACGGCAGGTATTCAAAGTCACATCAT AACTTAGCCATATTCTCCCTTGTTTTTTTCTCGAACTTGTTGAAATTAGAAATCTGTTGGTTGT GGCAACTGGTAACCACACTTCTCAAAGCTCCTTTAATTTTATTGTATGGTCCCTTGTCACCGTA TCTGTCTACATGAGACTCACCTCATAAAATCTTTCACTTAGTATATTAAAACGGTAGCTTTCAA TTGTTATAGTCCAGTTATACATTTCAGCATGTGCTGATGCCTATAAGGTTTTGTTGTCATGTCA CCCTAATTCATTCTTGTGCCACTTTTGATTTCAATGATGCACCCTGAATAGTTGCTGAGCTTGA ACAGTATGATAAGTTCAGTAGTATACCAGGAGCGGCTAAGCATATTTGGGCTGCCATGTGCCAC TTTGCAAACCAAGTTCCATGCTTACATTACAGAAGTAGCTTTAGCGCAAAGTTTTTATTGATTA CAGCTCTATGCATCAAAGATAAAAAATGGAAACGAAACTTTGTTTTCGTTATTTAACTAAAAGA GAAGCTTTGAGTCTTTGATATACAGGCGCAAGTAAAAAATAGCATTTCCTATGTGTTTCAAACA TCCATAGGGAAATCTGAAATAGCCATGAGATTCATTTCATCTAAATTCGAGATCATTGAACAGT GTGCCTGAATCTGATTTGCTTCTATTAGTAGTATATCCATCTTACCGTTGCAACCATTTCCTGA TTCCATCTACAAGTTAGTTACGACTCTTCTGTCCTTGTGCAAGATCCGGTCTGGTAGAAAACCA GATGGAATGTGCCTTGTTGTTGGTGCTTGCGCTCATGGATTCGAAAAAAATACAACAAGTGATA TTATTTTCAGTAGCTCATCAGTGAAAAGAGCTGGGAATTCAGGAGTACAGCTCTTTTGGGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_007744* 						
					
						PMCS
						0.129561174

Conservation Information
Conserved circRNAs	osi_circ_007744*
PMCS	0.129561174

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							81921362-81921344(+)
81921424-81925667(-)
						
						Potential amino acid sequence
						
							MKERFISSGGAIFEEKSLSSIYVYDDLAVSKIIFFTTLLSLCKIRSGRKPDGMCLVVGACAHGF
EKNTTSDIIFSSSSVKRAGNSGVQLFWEAC*(+)
MLDRLFSSNIAPPEEMKRSFMFSTSLAGLPKELYS*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to drought stress

Functional Information
Coding potential	Y
Potential coding position	81921362-81921344(+) 81921424-81925667(-)
Potential amino acid sequence	MKERFISSGGAIFEEKSLSSIYVYDDLAVSKIIFFTTLLSLCKIRSGRKPDGMCLVVGACAHGF EKNTTSDIIFSSSSVKRAGNSGVQLFWEAC(+) MLDRLFSSNIAPPEEMKRSFMFSTSLAGLPKELYS(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to drought stress

			
						 Other Information
					
						References
						Han et al., 2020;Zhang et al., 2019

circRNA

Detail information of Zm00001d050333_circ_g.3

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